RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
CKAP2-204ENST00000459902 STRN4Q9NRL3 753 aa11.3□□□□□ -0.6
CKAP2-204ENST00000459902 BIN2Q9UBW5 565 aaPredicted RBP11.3□□□□□ -0.6
CKAP2-204ENST00000459902 ATXN7L1Q9ULK2 861 aaPredicted RBP11.3□□□□□ -0.6
CKAP2-204ENST00000459902 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
CKAP2-204ENST00000459902 USP20Q9Y2K6 914 aa11.29□□□□□ -0.6
CKAP2-204ENST00000459902 KCNQ4P56696 695 aa11.28□□□□□ -0.6
CKAP2-204ENST00000459902 AAMPQ13685 434 aa11.28□□□□□ -0.6
CKAP2-204ENST00000459902 SND1Q7KZF4 910 aaKnown RBP eCLIP11.28□□□□□ -0.6
CKAP2-204ENST00000459902 GPR152Q8TDT2 470 aa11.28□□□□□ -0.6
CKAP2-204ENST00000459902 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
CKAP2-204ENST00000459902 FZD6O60353 706 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 FGFR3P22607 806 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 GAS6Q14393 721 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 RGL4Q8IZJ4 473 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 IRF7Q92985 503 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 MARK1Q9P0L2 795 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.61
CKAP2-204ENST00000459902 CD33P20138 364 aa11.26□□□□□ -0.61
CKAP2-204ENST00000459902 CTBSQ01459 385 aa11.26□□□□□ -0.61
CKAP2-204ENST00000459902 GRIN2CQ14957 1233 aa11.26□□□□□ -0.61
CKAP2-204ENST00000459902 LCE2CQ5TA81 110 aa11.26□□□□□ -0.61
CKAP2-204ENST00000459902 EDEM1Q92611 657 aa11.26□□□□□ -0.61
CKAP2-204ENST00000459902 CCDC87Q9NVE4 849 aa11.26□□□□□ -0.61
CKAP2-204ENST00000459902 EPB42P16452 691 aa11.25□□□□□ -0.61
CKAP2-204ENST00000459902 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
CKAP2-204ENST00000459902 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
CKAP2-204ENST00000459902 PIK3R5Q8WYR1 880 aa11.25□□□□□ -0.61
CKAP2-204ENST00000459902 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
CKAP2-204ENST00000459902 FAM13BQ9NYF5 915 aa11.25□□□□□ -0.61
CKAP2-204ENST00000459902 MZF1P28698 734 aaPredicted RBP11.24□□□□□ -0.61
CKAP2-204ENST00000459902 POLIQ9UNA4 740 aa11.24□□□□□ -0.61
CKAP2-204ENST00000459902 KCNMB2Q9Y691 235 aa11.24□□□□□ -0.61
CKAP2-204ENST00000459902 PDGFAP04085 211 aa11.23□□□□□ -0.61
CKAP2-204ENST00000459902 RNFT1Q5M7Z0 435 aa11.23□□□□□ -0.61
CKAP2-204ENST00000459902 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
CKAP2-204ENST00000459902 WFS1O76024 890 aa11.22□□□□□ -0.61
CKAP2-204ENST00000459902 FAM182BQ5T319 152 aa11.22□□□□□ -0.61
CKAP2-204ENST00000459902 SLC30A3Q99726 388 aa11.22□□□□□ -0.61
CKAP2-204ENST00000459902 C2CD2LO14523 706 aa11.21□□□□□ -0.61
CKAP2-204ENST00000459902 MX2P20592 715 aa11.21□□□□□ -0.61
CKAP2-204ENST00000459902 KRT76Q01546 638 aa11.21□□□□□ -0.61
CKAP2-204ENST00000459902 BRPF3Q9ULD4 1205 aa11.21□□□□□ -0.61
CKAP2-204ENST00000459902 TRIP4Q15650 581 aaPredicted RBP11.2□□□□□ -0.62
CKAP2-204ENST00000459902 GSX2Q9BZM3 304 aa11.2□□□□□ -0.62
CKAP2-204ENST00000459902 GGNBP2Q9H3C7 697 aa11.2□□□□□ -0.62
CKAP2-204ENST00000459902 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
CKAP2-204ENST00000459902 NDUFB5O43674 189 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 XYLBO75191 536 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 EGFRP00533 1210 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 DCTN4Q9UJW0 460 aa11.19□□□□□ -0.62
CKAP2-204ENST00000459902 BMP4P12644 408 aa11.18□□□□□ -0.62
CKAP2-204ENST00000459902 GMPRP36959 345 aa11.18□□□□□ -0.62
CKAP2-204ENST00000459902 CCINQ13939 588 aa11.18□□□□□ -0.62
CKAP2-204ENST00000459902 CNTNAP3BQ96NU0 1288 aa11.18□□□□□ -0.62
CKAP2-204ENST00000459902 CNTNAP3Q9BZ76 1288 aa11.18□□□□□ -0.62
CKAP2-204ENST00000459902 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
CKAP2-204ENST00000459902 PCSK2P16519 638 aa11.17□□□□□ -0.62
CKAP2-204ENST00000459902 MAPK1P28482 360 aa11.17□□□□□ -0.62
CKAP2-204ENST00000459902 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
CKAP2-204ENST00000459902 LCE2AQ5TA79 106 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-204ENST00000459902 RAB44Q7Z6P3 723 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-204ENST00000459902 GJD3Q8N144 294 aa11.17□□□□□ -0.62
CKAP2-204ENST00000459902 FNDC3AQ9Y2H6 1198 aaKnown RBP11.17□□□□□ -0.62
CKAP2-204ENST00000459902 A6NHS1 94 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 SASH3O75995 380 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 RPLP1P05386 114 aaKnown RBP11.16□□□□□ -0.62
CKAP2-204ENST00000459902 TARSP26639 723 aaKnown RBP11.16□□□□□ -0.62
CKAP2-204ENST00000459902 USP5P45974 858 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 C8orf34Q49A92 452 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 RBCK1Q9BYM8 510 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 PRR12Q9ULL5 1215 aa11.16□□□□□ -0.62
CKAP2-204ENST00000459902 KRT25Q7Z3Z0 450 aa11.15□□□□□ -0.62
CKAP2-204ENST00000459902 CITED4Q96RK1 184 aa11.15□□□□□ -0.62
CKAP2-204ENST00000459902 IGF1RP08069 1367 aa11.15□□□□□ -0.63
CKAP2-204ENST00000459902 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
CKAP2-204ENST00000459902 TTC16Q8NEE8 873 aa11.14□□□□□ -0.63
CKAP2-204ENST00000459902 BHMTQ93088 406 aa11.14□□□□□ -0.63
CKAP2-204ENST00000459902 NSFL1CQ9UNZ2 370 aaKnown RBP11.14□□□□□ -0.63
CKAP2-204ENST00000459902 MAP2K3P46734 347 aa11.13□□□□□ -0.63
CKAP2-204ENST00000459902 SRSF11Q05519 484 aaKnown RBP11.13□□□□□ -0.63
CKAP2-204ENST00000459902 XKR5Q6UX68 686 aa11.13□□□□□ -0.63
CKAP2-204ENST00000459902 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
CKAP2-204ENST00000459902 EFCC1Q9HA90 598 aa11.13□□□□□ -0.63
CKAP2-204ENST00000459902 ZFATQ9P243 1243 aa11.13□□□□□ -0.63
CKAP2-204ENST00000459902 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
CKAP2-204ENST00000459902 IGHA2P01877 340 aa11.12□□□□□ -0.63
CKAP2-204ENST00000459902 NFKB1P19838 968 aa11.12□□□□□ -0.63
CKAP2-204ENST00000459902 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
CKAP2-204ENST00000459902 PDE12Q6L8Q7 609 aaKnown RBP11.12□□□□□ -0.63
CKAP2-204ENST00000459902 SYT9Q86SS6 491 aa11.12□□□□□ -0.63
CKAP2-204ENST00000459902 NLRP13Q86W25 1043 aa11.12□□□□□ -0.63
CKAP2-204ENST00000459902 TMC1Q8TDI8 760 aa11.12□□□□□ -0.63
CKAP2-204ENST00000459902 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
CKAP2-204ENST00000459902 KLF15Q9UIH9 416 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms