RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 TCIRG1Q13488 830 aa27.88■■■□□ 2.05
SSNA1-202ENST00000459860 C2CD5Q86YS7 1000 aa27.88■■■□□ 2.05
SSNA1-202ENST00000459860 SLC4A2P04920 1241 aa27.87■■■□□ 2.05
SSNA1-202ENST00000459860 ARFGEF1Q9Y6D6 1849 aa27.86■■■□□ 2.05
SSNA1-202ENST00000459860 SUSD4Q5VX71 490 aa27.85■■■□□ 2.05
SSNA1-202ENST00000459860 RNF181Q9P0P0 153 aa27.85■■■□□ 2.05
SSNA1-202ENST00000459860 APLP1P51693 650 aa27.84■■■□□ 2.05
SSNA1-202ENST00000459860 IFFO2Q5TF58 517 aa27.84■■■□□ 2.05
SSNA1-202ENST00000459860 CDCA7LQ96GN5 454 aa27.84■■■□□ 2.05
SSNA1-202ENST00000459860 UTP14AQ9BVJ6 771 aaKnown RBP27.84■■■□□ 2.05
SSNA1-202ENST00000459860 RNF123Q5XPI4 1314 aa27.84■■■□□ 2.05
SSNA1-202ENST00000459860 NTSR2O95665 410 aa27.83■■■□□ 2.05
SSNA1-202ENST00000459860 NUTM1Q86Y26 1132 aa27.83■■■□□ 2.05
SSNA1-202ENST00000459860 CACNA1SQ13698 1873 aa27.83■■■□□ 2.04
SSNA1-202ENST00000459860 NLRP10Q86W26 655 aa27.82■■■□□ 2.04
SSNA1-202ENST00000459860 DNAJC5GQ8N7S2 189 aa27.82■■■□□ 2.04
SSNA1-202ENST00000459860 RIC1Q4ADV7 1423 aa27.82■■■□□ 2.04
SSNA1-202ENST00000459860 TNRC6CQ9HCJ0 1690 aaKnown RBP27.81■■■□□ 2.04
SSNA1-202ENST00000459860 FLIIQ13045 1269 aa27.81■■■□□ 2.04
SSNA1-202ENST00000459860 ERFEQ4G0M1 354 aa27.81■■■□□ 2.04
SSNA1-202ENST00000459860 RBM46Q8TBY0 533 aaKnown RBP27.81■■■□□ 2.04
SSNA1-202ENST00000459860 ZNF622Q969S3 477 aaKnown RBP eCLIP27.81■■■□□ 2.04
SSNA1-202ENST00000459860 PRELPP51888 382 aa27.8■■■□□ 2.04
SSNA1-202ENST00000459860 KSR2Q6VAB6 950 aa27.8■■■□□ 2.04
SSNA1-202ENST00000459860 ABCC12Q96J65 1359 aa27.8■■■□□ 2.04
SSNA1-202ENST00000459860 ATP5J2-PTCD1G3V325 749 aa27.79■■■□□ 2.04
SSNA1-202ENST00000459860 RASSF7Q02833 373 aa27.79■■■□□ 2.04
SSNA1-202ENST00000459860 FKBP5Q13451 457 aaPredicted RBP27.79■■■□□ 2.04
SSNA1-202ENST00000459860 TTLL6Q8N841 843 aa27.79■■■□□ 2.04
SSNA1-202ENST00000459860 MYD88Q99836 296 aa27.79■■■□□ 2.04
SSNA1-202ENST00000459860 ISCA1Q9BUE6 129 aa27.79■■■□□ 2.04
SSNA1-202ENST00000459860 TRMT112Q9UI30 125 aaKnown RBP27.79■■■□□ 2.04
SSNA1-202ENST00000459860 MAP3K2Q9Y2U5 619 aa27.79■■■□□ 2.04
SSNA1-202ENST00000459860 PI4KAP2A4QPH2 592 aa27.78■■■□□ 2.04
SSNA1-202ENST00000459860 NEXNQ0ZGT2 675 aa27.78■■■□□ 2.04
SSNA1-202ENST00000459860 G2E3Q7L622 706 aa27.78■■■□□ 2.04
SSNA1-202ENST00000459860 TRMT2AQ8IZ69 625 aaKnown RBP27.78■■■□□ 2.04
SSNA1-202ENST00000459860 PI4KAP1Q8N8J0 262 aa27.78■■■□□ 2.04
SSNA1-202ENST00000459860 KDM2BQ8NHM5 1336 aa27.77■■■□□ 2.04
SSNA1-202ENST00000459860 SH3TC1Q8TE82 1336 aa27.77■■■□□ 2.04
SSNA1-202ENST00000459860 SRGNP10124 158 aa27.77■■■□□ 2.04
SSNA1-202ENST00000459860 STYK1Q6J9G0 422 aa27.77■■■□□ 2.04
SSNA1-202ENST00000459860 ZNF428Q96B54 188 aa27.77■■■□□ 2.04
SSNA1-202ENST00000459860 MASTLQ96GX5 879 aa27.77■■■□□ 2.04
SSNA1-202ENST00000459860 METTL22Q9BUU2 404 aaPredicted RBP27.77■■■□□ 2.04
SSNA1-202ENST00000459860 TRIM28Q13263 835 aaKnown RBP27.76■■■□□ 2.03
SSNA1-202ENST00000459860 CNKSR1Q969H4 720 aa27.76■■■□□ 2.03
SSNA1-202ENST00000459860 NPR1P16066 1061 aa27.75■■■□□ 2.03
SSNA1-202ENST00000459860 RRAGCQ9HB90 399 aa27.75■■■□□ 2.03
SSNA1-202ENST00000459860 LAMB2P55268 1798 aa27.74■■■□□ 2.03
SSNA1-202ENST00000459860 KLRG2A4D1S0 409 aaPredicted RBP27.74■■■□□ 2.03
SSNA1-202ENST00000459860 CT47B1P0C2W7 299 aaPredicted RBP27.74■■■□□ 2.03
SSNA1-202ENST00000459860 NLRP3Q96P20 1036 aa27.74■■■□□ 2.03
SSNA1-202ENST00000459860 ZBED9Q6R2W3 1325 aa27.73■■■□□ 2.03
SSNA1-202ENST00000459860 ZC3H4Q9UPT8 1303 aaKnown RBP27.73■■■□□ 2.03
SSNA1-202ENST00000459860 LMNB1P20700 586 aa27.73■■■□□ 2.03
SSNA1-202ENST00000459860 CCDC191Q8NCU4 936 aa27.73■■■□□ 2.03
SSNA1-202ENST00000459860 RPGRQ92834 1020 aaKnown RBP27.73■■■□□ 2.03
SSNA1-202ENST00000459860 DDX60Q8IY21 1712 aaKnown RBP27.72■■■□□ 2.03
SSNA1-202ENST00000459860 NFKBIEO00221 500 aa27.72■■■□□ 2.03
SSNA1-202ENST00000459860 FSTL1Q12841 308 aa27.72■■■□□ 2.03
SSNA1-202ENST00000459860 C16orf71Q8IYS4 520 aaPredicted RBP27.72■■■□□ 2.03
SSNA1-202ENST00000459860 CWC25Q9NXE8 425 aaPredicted RBP27.72■■■□□ 2.03
SSNA1-202ENST00000459860 SLC10A5Q5PT55 438 aa27.71■■■□□ 2.03
SSNA1-202ENST00000459860 DNAAF4Q8WXU2 420 aa27.71■■■□□ 2.03
SSNA1-202ENST00000459860 CRY2Q49AN0 593 aa27.7■■■□□ 2.02
SSNA1-202ENST00000459860 SLX4Q8IY92 1834 aa27.69■■■□□ 2.02
SSNA1-202ENST00000459860 HSP90B1P14625 803 aaKnown RBP27.69■■■□□ 2.02
SSNA1-202ENST00000459860 ALDH1B1P30837 517 aa27.69■■■□□ 2.02
SSNA1-202ENST00000459860 ALDH1L2Q3SY69 923 aa27.69■■■□□ 2.02
SSNA1-202ENST00000459860 FAM89AQ96GI7 184 aa27.69■■■□□ 2.02
SSNA1-202ENST00000459860 HTRA3P83110 453 aa27.68■■■□□ 2.02
SSNA1-202ENST00000459860 PRPF40BQ6NWY9 871 aaKnown RBP27.68■■■□□ 2.02
SSNA1-202ENST00000459860 ZBTB38Q8NAP3 1195 aaPredicted RBP27.68■■■□□ 2.02
SSNA1-202ENST00000459860 GLTPD2A6NH11 291 aa27.67■■■□□ 2.02
SSNA1-202ENST00000459860 HCLS1P14317 486 aaPredicted RBP27.67■■■□□ 2.02
SSNA1-202ENST00000459860 MRPL50Q8N5N7 158 aaKnown RBP27.67■■■□□ 2.02
SSNA1-202ENST00000459860 SSH1Q8WYL5 1049 aa27.67■■■□□ 2.02
SSNA1-202ENST00000459860 RBM17Q96I25 401 aaKnown RBP27.67■■■□□ 2.02
SSNA1-202ENST00000459860 SMC4Q9NTJ3 1288 aa27.67■■■□□ 2.02
SSNA1-202ENST00000459860 RTL5Q5HYW3 569 aaPredicted RBP27.66■■■□□ 2.02
SSNA1-202ENST00000459860 PCCAP05165 728 aaPredicted RBP27.65■■■□□ 2.02
SSNA1-202ENST00000459860 IGKV5-2P06315 115 aa27.65■■■□□ 2.02
SSNA1-202ENST00000459860 SOGA3Q5TF21 947 aa27.65■■■□□ 2.02
SSNA1-202ENST00000459860 SYNE4Q8N205 404 aa27.65■■■□□ 2.02
SSNA1-202ENST00000459860 BCL2L13Q9BXK5 485 aa27.65■■■□□ 2.02
SSNA1-202ENST00000459860 ZNF219Q9P2Y4 722 aaPredicted RBP27.65■■■□□ 2.02
SSNA1-202ENST00000459860 SBF1O95248 1867 aa27.64■■■□□ 2.02
SSNA1-202ENST00000459860 NEURL1BA8MQ27 555 aa27.64■■■□□ 2.02
SSNA1-202ENST00000459860 IRS4O14654 1257 aaPredicted RBP27.64■■■□□ 2.02
SSNA1-202ENST00000459860 HOXA10P31260 410 aaPredicted RBP27.64■■■□□ 2.02
SSNA1-202ENST00000459860 CWF19L2Q2TBE0 894 aaKnown RBP27.64■■■□□ 2.02
SSNA1-202ENST00000459860 LINS1Q8NG48 757 aa27.64■■■□□ 2.02
SSNA1-202ENST00000459860 PTPRCP08575 1304 aa27.64■■■□□ 2.01
SSNA1-202ENST00000459860 C21orf2O43822 256 aa27.63■■■□□ 2.01
SSNA1-202ENST00000459860 C3orf67Q6ZVT6 689 aa27.63■■■□□ 2.01
SSNA1-202ENST00000459860 F6X3S4 739 aa27.62■■■□□ 2.01
SSNA1-202ENST00000459860 SMC1BQ8NDV3 1235 aa27.62■■■□□ 2.01
SSNA1-202ENST00000459860 KLRG1Q96E93 195 aa27.62■■■□□ 2.01
SSNA1-202ENST00000459860 CRAMP1Q96RY5 1269 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms