RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
NEDD9-205ENST00000459670 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
NEDD9-205ENST00000459670 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
NEDD9-205ENST00000459670 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
NEDD9-205ENST00000459670 RIC1Q4ADV7 1423 aa13.1□□□□□ -0.31
NEDD9-205ENST00000459670 USP42Q9H9J4 1324 aaKnown RBP13.1□□□□□ -0.31
NEDD9-205ENST00000459670 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
NEDD9-205ENST00000459670 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
NEDD9-205ENST00000459670 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
NEDD9-205ENST00000459670 NARFQ9UHQ1 456 aa13.09□□□□□ -0.31
NEDD9-205ENST00000459670 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
NEDD9-205ENST00000459670 TAF1P21675 1872 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 A0A087WZG4 1122 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 PCCAP05165 728 aaPredicted RBP13.08□□□□□ -0.32
NEDD9-205ENST00000459670 ADRA2BP18089 450 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 RFX5P48382 616 aaPredicted RBP13.08□□□□□ -0.32
NEDD9-205ENST00000459670 FOXO4P98177 505 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 ZNF827Q17R98 1081 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
NEDD9-205ENST00000459670 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
NEDD9-205ENST00000459670 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
NEDD9-205ENST00000459670 GNPATO15228 680 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 NTSR2O95665 410 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 PDE4AP27815 886 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 SSFA2P28290 1259 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 NUCB1Q02818 461 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
NEDD9-205ENST00000459670 NOP58Q9Y2X3 529 aaKnown RBP13.07□□□□□ -0.32
NEDD9-205ENST00000459670 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
NEDD9-205ENST00000459670 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
NEDD9-205ENST00000459670 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
NEDD9-205ENST00000459670 C9orf78Q9NZ63 289 aaPredicted RBP13.06□□□□□ -0.32
NEDD9-205ENST00000459670 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
NEDD9-205ENST00000459670 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
NEDD9-205ENST00000459670 DLEC1Q9Y238 1755 aa13.05□□□□□ -0.32
NEDD9-205ENST00000459670 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
NEDD9-205ENST00000459670 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
NEDD9-205ENST00000459670 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
NEDD9-205ENST00000459670 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
NEDD9-205ENST00000459670 ABCC12Q96J65 1359 aa13.05□□□□□ -0.32
NEDD9-205ENST00000459670 APBA3O96018 575 aa13.04□□□□□ -0.32
NEDD9-205ENST00000459670 CSF1RP07333 972 aa13.04□□□□□ -0.32
NEDD9-205ENST00000459670 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
NEDD9-205ENST00000459670 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
NEDD9-205ENST00000459670 LTBP1Q14766 1721 aa13.04□□□□□ -0.32
NEDD9-205ENST00000459670 KIAA1551Q9HCM1 1747 aa13.04□□□□□ -0.32
NEDD9-205ENST00000459670 HMMRO75330 724 aa13.03□□□□□ -0.32
NEDD9-205ENST00000459670 GPTP24298 496 aa13.03□□□□□ -0.32
NEDD9-205ENST00000459670 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
NEDD9-205ENST00000459670 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
NEDD9-205ENST00000459670 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
NEDD9-205ENST00000459670 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
NEDD9-205ENST00000459670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
NEDD9-205ENST00000459670 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 GYS1P13807 737 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 PTPN12Q05209 780 aaKnown RBP13.02□□□□□ -0.33
NEDD9-205ENST00000459670 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 TBC1D9BQ66K14 1250 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 AK7Q96M32 723 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
NEDD9-205ENST00000459670 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
NEDD9-205ENST00000459670 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
NEDD9-205ENST00000459670 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
NEDD9-205ENST00000459670 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
NEDD9-205ENST00000459670 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
NEDD9-205ENST00000459670 CARMIL3Q8ND23 1372 aa13□□□□□ -0.33
NEDD9-205ENST00000459670 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
NEDD9-205ENST00000459670 NIP7Q9Y221 180 aaKnown RBP eCLIP13□□□□□ -0.33
NEDD9-205ENST00000459670 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
NEDD9-205ENST00000459670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13□□□□□ -0.33
NEDD9-205ENST00000459670 ZNF609O15014 1411 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 TM4SF1P30408 202 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 CTSWP56202 376 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
NEDD9-205ENST00000459670 SLC10A5Q5PT55 438 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 TTLL11Q8NHH1 800 aa12.99□□□□□ -0.33
NEDD9-205ENST00000459670 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
NEDD9-205ENST00000459670 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
NEDD9-205ENST00000459670 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
NEDD9-205ENST00000459670 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
NEDD9-205ENST00000459670 SASH1O94885 1247 aa12.98□□□□□ -0.33
NEDD9-205ENST00000459670 NFIXQ14938 502 aa12.98□□□□□ -0.33
NEDD9-205ENST00000459670 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
NEDD9-205ENST00000459670 COL23A1Q86Y22 540 aaPredicted RBP12.98□□□□□ -0.33
NEDD9-205ENST00000459670 UTP14AQ9BVJ6 771 aaKnown RBP12.98□□□□□ -0.33
NEDD9-205ENST00000459670 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
NEDD9-205ENST00000459670 CACNA1SQ13698 1873 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 PDE8AO60658 829 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 PHF14O94880 888 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 DDR1Q08345 913 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms