RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 MIER1Q8N108 512 aa26.69■■□□□ 1.86
VARS-218ENST00000459667 TCERG1O14776 1098 aaKnown RBP26.68■■□□□ 1.86
VARS-218ENST00000459667 NPR1P16066 1061 aa26.68■■□□□ 1.86
VARS-218ENST00000459667 RIC3Q7Z5B4 369 aa26.68■■□□□ 1.86
VARS-218ENST00000459667 ZNF784Q8NCA9 323 aaPredicted RBP26.68■■□□□ 1.86
VARS-218ENST00000459667 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
VARS-218ENST00000459667 SLX4Q8IY92 1834 aa26.66■■□□□ 1.86
VARS-218ENST00000459667 ADCY9O60503 1353 aa26.66■■□□□ 1.86
VARS-218ENST00000459667 VAMP4O75379 141 aa26.65■■□□□ 1.86
VARS-218ENST00000459667 DDX58O95786 925 aaKnown RBP26.65■■□□□ 1.86
VARS-218ENST00000459667 PRPF40BQ6NWY9 871 aaKnown RBP26.65■■□□□ 1.86
VARS-218ENST00000459667 ISCA1Q9BUE6 129 aa26.65■■□□□ 1.86
VARS-218ENST00000459667 ZNF219Q9P2Y4 722 aaPredicted RBP26.65■■□□□ 1.86
VARS-218ENST00000459667 ATP5J2-PTCD1G3V325 749 aa26.64■■□□□ 1.86
VARS-218ENST00000459667 CRY2Q49AN0 593 aa26.64■■□□□ 1.86
VARS-218ENST00000459667 TRMT112Q9UI30 125 aaKnown RBP26.64■■□□□ 1.86
VARS-218ENST00000459667 C21orf2O43822 256 aa26.63■■□□□ 1.85
VARS-218ENST00000459667 SLC4A2P04920 1241 aa26.63■■□□□ 1.85
VARS-218ENST00000459667 ZNF428Q96B54 188 aa26.62■■□□□ 1.85
VARS-218ENST00000459667 SH3TC1Q8TE82 1336 aa26.62■■□□□ 1.85
VARS-218ENST00000459667 CACNA1FO60840 1977 aa26.61■■□□□ 1.85
VARS-218ENST00000459667 RASSF7Q02833 373 aa26.61■■□□□ 1.85
VARS-218ENST00000459667 SLC10A5Q5PT55 438 aa26.61■■□□□ 1.85
VARS-218ENST00000459667 RPGRQ92834 1020 aaKnown RBP26.61■■□□□ 1.85
VARS-218ENST00000459667 MYD88Q99836 296 aa26.61■■□□□ 1.85
VARS-218ENST00000459667 SBF1O95248 1867 aa26.6■■□□□ 1.85
VARS-218ENST00000459667 E9PSI1 815 aa26.6■■□□□ 1.85
VARS-218ENST00000459667 ALDH1B1P30837 517 aa26.6■■□□□ 1.85
VARS-218ENST00000459667 C3orf67Q6ZVT6 689 aa26.6■■□□□ 1.85
VARS-218ENST00000459667 G2E3Q7L622 706 aa26.6■■□□□ 1.85
VARS-218ENST00000459667 NLRP3Q96P20 1036 aa26.6■■□□□ 1.85
VARS-218ENST00000459667 TRIM28Q13263 835 aaKnown RBP26.59■■□□□ 1.85
VARS-218ENST00000459667 C9orf131Q5VYM1 1079 aa26.59■■□□□ 1.85
VARS-218ENST00000459667 KSR2Q6VAB6 950 aa26.59■■□□□ 1.85
VARS-218ENST00000459667 SYNE4Q8N205 404 aa26.59■■□□□ 1.85
VARS-218ENST00000459667 MAP3K2Q9Y2U5 619 aa26.59■■□□□ 1.85
VARS-218ENST00000459667 LAMB2P55268 1798 aa26.58■■□□□ 1.85
VARS-218ENST00000459667 FER1L6Q2WGJ9 1857 aa26.58■■□□□ 1.85
VARS-218ENST00000459667 PI4KAP2A4QPH2 592 aa26.58■■□□□ 1.85
VARS-218ENST00000459667 SOGA3Q5TF21 947 aa26.58■■□□□ 1.85
VARS-218ENST00000459667 PI4KAP1Q8N8J0 262 aa26.58■■□□□ 1.85
VARS-218ENST00000459667 METTL22Q9BUU2 404 aaPredicted RBP26.58■■□□□ 1.85
VARS-218ENST00000459667 NFKBIEO00221 500 aa26.57■■□□□ 1.84
VARS-218ENST00000459667 HCLS1P14317 486 aaPredicted RBP26.57■■□□□ 1.84
VARS-218ENST00000459667 HOXA10P31260 410 aaPredicted RBP26.57■■□□□ 1.84
VARS-218ENST00000459667 FLIIQ13045 1269 aa26.57■■□□□ 1.84
VARS-218ENST00000459667 RBM17Q96I25 401 aaKnown RBP26.57■■□□□ 1.84
VARS-218ENST00000459667 RNF181Q9P0P0 153 aa26.57■■□□□ 1.84
VARS-218ENST00000459667 DDX60Q8IY21 1712 aaKnown RBP26.56■■□□□ 1.84
VARS-218ENST00000459667 C7orf43Q8WVR3 580 aa26.56■■□□□ 1.84
VARS-218ENST00000459667 FAM89AQ96GI7 184 aa26.56■■□□□ 1.84
VARS-218ENST00000459667 SLFN5Q08AF3 891 aa26.55■■□□□ 1.84
VARS-218ENST00000459667 LMNB1P20700 586 aa26.54■■□□□ 1.84
VARS-218ENST00000459667 CCDC93Q567U6 631 aa26.54■■□□□ 1.84
VARS-218ENST00000459667 CCDC191Q8NCU4 936 aa26.54■■□□□ 1.84
VARS-218ENST00000459667 CRAMP1Q96RY5 1269 aa26.54■■□□□ 1.84
VARS-218ENST00000459667 NEXNQ0ZGT2 675 aa26.53■■□□□ 1.84
VARS-218ENST00000459667 FKBP5Q13451 457 aaPredicted RBP26.53■■□□□ 1.84
VARS-218ENST00000459667 RTL5Q5HYW3 569 aaPredicted RBP26.53■■□□□ 1.84
VARS-218ENST00000459667 CDCA7LQ96GN5 454 aa26.53■■□□□ 1.84
VARS-218ENST00000459667 TAOK3Q9H2K8 898 aa26.53■■□□□ 1.84
VARS-218ENST00000459667 CWC25Q9NXE8 425 aaPredicted RBP26.53■■□□□ 1.84
VARS-218ENST00000459667 CCDC88AQ3V6T2 1871 aa26.53■■□□□ 1.84
VARS-218ENST00000459667 PRELPP51888 382 aa26.52■■□□□ 1.84
VARS-218ENST00000459667 ZNF526Q8TF50 670 aaPredicted RBP26.52■■□□□ 1.84
VARS-218ENST00000459667 LTBP3Q9NS15 1303 aa26.52■■□□□ 1.84
VARS-218ENST00000459667 OLFM4Q6UX06 510 aa26.51■■□□□ 1.83
VARS-218ENST00000459667 ZBTB38Q8NAP3 1195 aaPredicted RBP26.51■■□□□ 1.83
VARS-218ENST00000459667 ABCC4O15439 1325 aa26.5■■□□□ 1.83
VARS-218ENST00000459667 IRS4O14654 1257 aaPredicted RBP26.5■■□□□ 1.83
VARS-218ENST00000459667 GPBP1L1Q9HC44 474 aaPredicted RBP26.5■■□□□ 1.83
VARS-218ENST00000459667 TIAM2Q8IVF5 1701 aa26.5■■□□□ 1.83
VARS-218ENST00000459667 PPEF1O14829 653 aaPredicted RBP26.49■■□□□ 1.83
VARS-218ENST00000459667 PCCAP05165 728 aaPredicted RBP26.49■■□□□ 1.83
VARS-218ENST00000459667 IGKV5-2P06315 115 aa26.49■■□□□ 1.83
VARS-218ENST00000459667 RTKN2Q8IZC4 609 aa26.48■■□□□ 1.83
VARS-218ENST00000459667 DNAAF4Q8WXU2 420 aa26.48■■□□□ 1.83
VARS-218ENST00000459667 CWF19L2Q2TBE0 894 aaKnown RBP26.47■■□□□ 1.83
VARS-218ENST00000459667 DDX46Q7L014 1031 aaKnown RBP26.47■■□□□ 1.83
VARS-218ENST00000459667 DICER1Q9UPY3 1922 aaKnown RBP26.47■■□□□ 1.83
VARS-218ENST00000459667 ZC3H4Q9UPT8 1303 aaKnown RBP26.46■■□□□ 1.83
VARS-218ENST00000459667 NEURL1BA8MQ27 555 aa26.46■■□□□ 1.83
VARS-218ENST00000459667 HSP90B1P14625 803 aaKnown RBP26.46■■□□□ 1.83
VARS-218ENST00000459667 FKBP4Q02790 459 aaKnown RBP eCLIP26.46■■□□□ 1.83
VARS-218ENST00000459667 CC2D2BQ6DHV5 1058 aa26.46■■□□□ 1.83
VARS-218ENST00000459667 SF3B3Q15393 1217 aaKnown RBP26.45■■□□□ 1.82
VARS-218ENST00000459667 TRMT2AQ8IZ69 625 aaKnown RBP26.45■■□□□ 1.82
VARS-218ENST00000459667 JARID2Q92833 1246 aaPredicted RBP26.45■■□□□ 1.82
VARS-218ENST00000459667 SNED1Q8TER0 1413 aa26.45■■□□□ 1.82
VARS-218ENST00000459667 GRAPQ13588 217 aa26.44■■□□□ 1.82
VARS-218ENST00000459667 GRAPLQ8TC17 118 aaPredicted RBP26.44■■□□□ 1.82
VARS-218ENST00000459667 CDHR2Q9BYE9 1310 aa26.43■■□□□ 1.82
VARS-218ENST00000459667 TAF1P21675 1872 aa26.43■■□□□ 1.82
VARS-218ENST00000459667 SLC51AQ86UW1 340 aa26.43■■□□□ 1.82
VARS-218ENST00000459667 F6X3S4 739 aa26.42■■□□□ 1.82
VARS-218ENST00000459667 PDE8AO60658 829 aa26.42■■□□□ 1.82
VARS-218ENST00000459667 BBOX1O75936 387 aa26.42■■□□□ 1.82
VARS-218ENST00000459667 LINS1Q8NG48 757 aa26.42■■□□□ 1.82
VARS-218ENST00000459667 TMX4Q9H1E5 349 aaPredicted RBP26.42■■□□□ 1.82
VARS-218ENST00000459667 ATP6V0A2Q9Y487 856 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms