RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 RWDD1Q9H446 243 aaPredicted RBP11.27□□□□□ -0.61
VPS50-207ENST00000458530 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.61
VPS50-207ENST00000458530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
VPS50-207ENST00000458530 TCERG1O14776 1098 aaKnown RBP11.26□□□□□ -0.61
VPS50-207ENST00000458530 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
VPS50-207ENST00000458530 FLIIQ13045 1269 aa11.26□□□□□ -0.61
VPS50-207ENST00000458530 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
VPS50-207ENST00000458530 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
VPS50-207ENST00000458530 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
VPS50-207ENST00000458530 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
VPS50-207ENST00000458530 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
VPS50-207ENST00000458530 SNRPA1P09661 255 aaKnown RBP11.25□□□□□ -0.61
VPS50-207ENST00000458530 FKBP5Q13451 457 aaPredicted RBP11.25□□□□□ -0.61
VPS50-207ENST00000458530 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
VPS50-207ENST00000458530 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
VPS50-207ENST00000458530 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
VPS50-207ENST00000458530 TNNQ9UQP3 1299 aa11.25□□□□□ -0.61
VPS50-207ENST00000458530 ERBB4Q15303 1308 aa11.25□□□□□ -0.61
VPS50-207ENST00000458530 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
VPS50-207ENST00000458530 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
VPS50-207ENST00000458530 EIF2S2P20042 333 aaKnown RBP11.24□□□□□ -0.61
VPS50-207ENST00000458530 TGFB2P61812 414 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 SMIM5Q71RC9 77 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 AK7Q96M32 723 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
VPS50-207ENST00000458530 PCNTO95613 3336 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 KCPQ6ZWJ8 1503 aa11.24□□□□□ -0.61
VPS50-207ENST00000458530 KCNQ3O43525 872 aa11.23□□□□□ -0.61
VPS50-207ENST00000458530 PRELPP51888 382 aa11.23□□□□□ -0.61
VPS50-207ENST00000458530 FSTL1Q12841 308 aa11.23□□□□□ -0.61
VPS50-207ENST00000458530 PIGBQ92521 554 aa11.23□□□□□ -0.61
VPS50-207ENST00000458530 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
VPS50-207ENST00000458530 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
VPS50-207ENST00000458530 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
VPS50-207ENST00000458530 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
VPS50-207ENST00000458530 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
VPS50-207ENST00000458530 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
VPS50-207ENST00000458530 HDAC1Q13547 482 aaPredicted RBP11.22□□□□□ -0.61
VPS50-207ENST00000458530 NECTIN2Q92692 538 aa11.22□□□□□ -0.61
VPS50-207ENST00000458530 TEX13AQ9BXU3 409 aaPredicted RBP11.22□□□□□ -0.61
VPS50-207ENST00000458530 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
VPS50-207ENST00000458530 ARFGEF2Q9Y6D5 1785 aa11.22□□□□□ -0.61
VPS50-207ENST00000458530 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
VPS50-207ENST00000458530 PHF14O94880 888 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 GNAI3P08754 354 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 KCNA3P22001 575 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 SIK1P57059 783 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 ITPK1Q13572 414 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.61
VPS50-207ENST00000458530 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
VPS50-207ENST00000458530 ZNF831Q5JPB2 1677 aa11.2□□□□□ -0.62
VPS50-207ENST00000458530 MMP10P09238 476 aa11.2□□□□□ -0.62
VPS50-207ENST00000458530 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
VPS50-207ENST00000458530 HTRA3P83110 453 aa11.2□□□□□ -0.62
VPS50-207ENST00000458530 G2E3Q7L622 706 aa11.2□□□□□ -0.62
VPS50-207ENST00000458530 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
VPS50-207ENST00000458530 ARFGEF1Q9Y6D6 1849 aa11.19□□□□□ -0.62
VPS50-207ENST00000458530 HMMRO75330 724 aa11.19□□□□□ -0.62
VPS50-207ENST00000458530 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
VPS50-207ENST00000458530 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
VPS50-207ENST00000458530 TJP1Q07157 1748 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 A0A0G2JLW4 131 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 SEC24BO95487 1268 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
VPS50-207ENST00000458530 RPAP2Q8IXW5 612 aaPredicted RBP11.18□□□□□ -0.62
VPS50-207ENST00000458530 GCC1Q96CN9 775 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 SRCIN1Q9C0H9 1055 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
VPS50-207ENST00000458530 F6X3S4 739 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 GNPATO15228 680 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 DPEP1P16444 411 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 C9orf131Q5VYM1 1079 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 TNS4Q8IZW8 715 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 NLGN1Q8N2Q7 840 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
VPS50-207ENST00000458530 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
VPS50-207ENST00000458530 ANKRD36CQ5JPF3 1778 aa11.16□□□□□ -0.62
VPS50-207ENST00000458530 STARD3NLO95772 234 aa11.16□□□□□ -0.62
VPS50-207ENST00000458530 GNAI2P04899 355 aa11.16□□□□□ -0.62
VPS50-207ENST00000458530 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
VPS50-207ENST00000458530 GYS1P13807 737 aa11.16□□□□□ -0.62
VPS50-207ENST00000458530 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
VPS50-207ENST00000458530 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
VPS50-207ENST00000458530 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
VPS50-207ENST00000458530 TNRC6CQ9HCJ0 1690 aaKnown RBP11.15□□□□□ -0.62
VPS50-207ENST00000458530 PI4KAP2A4QPH2 592 aa11.15□□□□□ -0.62
VPS50-207ENST00000458530 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
VPS50-207ENST00000458530 IGHDP01880 384 aa11.15□□□□□ -0.62
VPS50-207ENST00000458530 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
VPS50-207ENST00000458530 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
VPS50-207ENST00000458530 PI4KAP1Q8N8J0 262 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms