RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
PCCA-208ENST00000458283 IL6STP40189 918 aaPredicted RBP12.99□□□□□ -0.33
PCCA-208ENST00000458283 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
PCCA-208ENST00000458283 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
PCCA-208ENST00000458283 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
PCCA-208ENST00000458283 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
PCCA-208ENST00000458283 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
PCCA-208ENST00000458283 PLBD2Q8NHP8 589 aa12.98□□□□□ -0.33
PCCA-208ENST00000458283 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
PCCA-208ENST00000458283 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
PCCA-208ENST00000458283 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
PCCA-208ENST00000458283 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
PCCA-208ENST00000458283 SRCIN1Q9C0H9 1055 aa12.97□□□□□ -0.33
PCCA-208ENST00000458283 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
PCCA-208ENST00000458283 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
PCCA-208ENST00000458283 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
PCCA-208ENST00000458283 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 GPTP24298 496 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 RFC4P35249 363 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 CCT4P50991 539 aaKnown RBP12.96□□□□□ -0.33
PCCA-208ENST00000458283 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
PCCA-208ENST00000458283 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
PCCA-208ENST00000458283 ANKRD36CQ5JPF3 1778 aa12.96□□□□□ -0.34
PCCA-208ENST00000458283 A0A087WZG4 1122 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 HLFQ16534 295 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 INTS3Q68E01 1043 aaKnown RBP12.95□□□□□ -0.34
PCCA-208ENST00000458283 MEIS3Q99687 375 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 METTL22Q9BUU2 404 aaPredicted RBP12.95□□□□□ -0.34
PCCA-208ENST00000458283 BCS1LQ9Y276 419 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
PCCA-208ENST00000458283 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
PCCA-208ENST00000458283 HSPA6P17066 643 aa12.94□□□□□ -0.34
PCCA-208ENST00000458283 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
PCCA-208ENST00000458283 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
PCCA-208ENST00000458283 NUP98P52948 1817 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 FAM177BA6PVY3 158 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 TGFB2P61812 414 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
PCCA-208ENST00000458283 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
PCCA-208ENST00000458283 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
PCCA-208ENST00000458283 ZPR1O75312 459 aa12.92□□□□□ -0.34
PCCA-208ENST00000458283 GYS1P13807 737 aa12.92□□□□□ -0.34
PCCA-208ENST00000458283 RTL5Q5HYW3 569 aaPredicted RBP12.92□□□□□ -0.34
PCCA-208ENST00000458283 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
PCCA-208ENST00000458283 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
PCCA-208ENST00000458283 UBTFL1P0CB47 393 aaPredicted RBP12.91□□□□□ -0.34
PCCA-208ENST00000458283 DPEP1P16444 411 aa12.91□□□□□ -0.34
PCCA-208ENST00000458283 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
PCCA-208ENST00000458283 ARHGAP27Q6ZUM4 889 aa12.91□□□□□ -0.34
PCCA-208ENST00000458283 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
PCCA-208ENST00000458283 ZNF652Q9Y2D9 606 aa12.91□□□□□ -0.34
PCCA-208ENST00000458283 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
PCCA-208ENST00000458283 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
PCCA-208ENST00000458283 TCIRG1Q13488 830 aa12.9□□□□□ -0.34
PCCA-208ENST00000458283 HSP90AB3PQ58FF7 597 aa12.9□□□□□ -0.34
PCCA-208ENST00000458283 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
PCCA-208ENST00000458283 CWC25Q9NXE8 425 aaPredicted RBP12.9□□□□□ -0.34
PCCA-208ENST00000458283 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
PCCA-208ENST00000458283 UBN2Q6ZU65 1347 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 GRM8O00222 908 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 KIF3CO14782 793 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 ZBTB7BO15156 539 aaPredicted RBP12.89□□□□□ -0.35
PCCA-208ENST00000458283 GCKRQ14397 625 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
PCCA-208ENST00000458283 NIP7Q9Y221 180 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCCA-208ENST00000458283 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
PCCA-208ENST00000458283 LRRFIP2Q9Y608 721 aaKnown RBP12.89□□□□□ -0.35
PCCA-208ENST00000458283 GNAI3P08754 354 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
PCCA-208ENST00000458283 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
PCCA-208ENST00000458283 GNAI2P04899 355 aa12.87□□□□□ -0.35
PCCA-208ENST00000458283 CHMP4BQ9H444 224 aaKnown RBP12.87□□□□□ -0.35
PCCA-208ENST00000458283 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
PCCA-208ENST00000458283 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
PCCA-208ENST00000458283 APLP1P51693 650 aa12.86□□□□□ -0.35
PCCA-208ENST00000458283 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
PCCA-208ENST00000458283 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
PCCA-208ENST00000458283 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
PCCA-208ENST00000458283 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
PCCA-208ENST00000458283 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
PCCA-208ENST00000458283 SBF1O95248 1867 aa12.86□□□□□ -0.35
PCCA-208ENST00000458283 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
PCCA-208ENST00000458283 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms