RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 HMGN5P82970 282 aaKnown RBP6.98□□□□□ -1.29
HMGB4-202ENST00000458277 TPRNQ4KMQ1 711 aa6.98□□□□□ -1.29
HMGB4-202ENST00000458277 PSMD1Q99460 953 aa6.98□□□□□ -1.29
HMGB4-202ENST00000458277 ZCCHC2Q9C0B9 1178 aaKnown RBP6.98□□□□□ -1.29
HMGB4-202ENST00000458277 FAM13BQ9NYF5 915 aa6.98□□□□□ -1.29
HMGB4-202ENST00000458277 ATP1B4Q9UN42 357 aaPredicted RBP6.98□□□□□ -1.29
HMGB4-202ENST00000458277 PCDHGC4Q9Y5F7 938 aa6.98□□□□□ -1.29
HMGB4-202ENST00000458277 THOC2Q8NI27 1593 aaKnown RBP6.98□□□□□ -1.29
HMGB4-202ENST00000458277 PATL2C9JE40 543 aaKnown RBP6.97□□□□□ -1.29
HMGB4-202ENST00000458277 PAX4O43316 350 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 FRAT2O75474 233 aaPredicted RBP6.97□□□□□ -1.29
HMGB4-202ENST00000458277 SKOR2Q2VWA4 1001 aaPredicted RBP6.97□□□□□ -1.29
HMGB4-202ENST00000458277 NBPF1Q3BBV0 1214 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 HSP90AB3PQ58FF7 597 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 FIGNL1Q6PIW4 674 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 PDS5BQ9NTI5 1447 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 CALCOCO1Q9P1Z2 691 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 PCDHB11Q9Y5F2 797 aa6.97□□□□□ -1.29
HMGB4-202ENST00000458277 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.29
HMGB4-202ENST00000458277 CCDC144AA2RUR9 1427 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 GNRH1P01148 92 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 TXKP42681 527 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 GABPB1Q06547 395 aaPredicted RBP6.96□□□□□ -1.3
HMGB4-202ENST00000458277 GRIK4Q16099 956 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 RNF20Q5VTR2 975 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 CCDC125Q86Z20 511 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 PDCL2Q8N4E4 241 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 AK7Q96M32 723 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 PUS7Q96PZ0 661 aaKnown RBP6.96□□□□□ -1.3
HMGB4-202ENST00000458277 CRISPLD1Q9H336 500 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 NUDCQ9Y266 331 aa6.96□□□□□ -1.3
HMGB4-202ENST00000458277 DCDC2BA2VCK2 349 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
HMGB4-202ENST00000458277 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 H2AFB2P0C5Z0 115 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 SASS6Q6UVJ0 657 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 TIGD1Q96MW7 591 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 NACC1Q96RE7 527 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 FEZ1Q99689 392 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 DNAAF2Q9NVR5 837 aaKnown RBP6.95□□□□□ -1.3
HMGB4-202ENST00000458277 HCN2Q9UL51 889 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 ERCC6Q03468 1493 aa6.95□□□□□ -1.3
HMGB4-202ENST00000458277 SCAPERQ9BY12 1400 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 FANCD2Q9BXW9 1451 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 PRDM2Q13029 1718 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 ZNF500O60304 480 aaPredicted RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 MAPTP10636 758 aaKnown RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 SSR1P43307 286 aaKnown RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 PDE4DQ08499 809 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 TRIM28Q13263 835 aaKnown RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 PRIMPOLQ96LW4 560 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 FHDC1Q9C0D6 1143 aaPredicted RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 GRPEL1Q9HAV7 217 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 AVENQ9NQS1 362 aaPredicted RBP6.94□□□□□ -1.3
HMGB4-202ENST00000458277 PRR12Q9ULL5 1215 aa6.94□□□□□ -1.3
HMGB4-202ENST00000458277 WDR62O43379 1518 aa6.93□□□□□ -1.3
HMGB4-202ENST00000458277 KHNYNO15037 678 aaKnown RBP6.93□□□□□ -1.3
HMGB4-202ENST00000458277 RBM25P49756 843 aaKnown RBP6.93□□□□□ -1.3
HMGB4-202ENST00000458277 RIPK4P57078 832 aa6.93□□□□□ -1.3
HMGB4-202ENST00000458277 MNS1Q8NEH6 495 aa6.93□□□□□ -1.3
HMGB4-202ENST00000458277 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
HMGB4-202ENST00000458277 HRH3Q9Y5N1 445 aa6.93□□□□□ -1.3
HMGB4-202ENST00000458277 UQCRHLA0A096LP55 91 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 UQCRHP07919 91 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 ALAS2P22557 587 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 TNP2Q05952 138 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
HMGB4-202ENST00000458277 XAGE2Q96GT9 111 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 PPP1R9BQ96SB3 815 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 RAI14Q9P0K7 980 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 MRC2Q9UBG0 1479 aa6.92□□□□□ -1.3
HMGB4-202ENST00000458277 ELOA3CA0A087WX78 387 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 ELOA3DA6NLF2 546 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 KIF1CO43896 1103 aaKnown RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 ELNP15502 786 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 TNNT3P45378 269 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 LMOD3Q0VAK6 560 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 ELOA3BQ3SY89 546 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 FAM182BQ5T319 152 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 ZNF468Q5VIY5 522 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 TBC1D9Q6ZT07 1266 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 ELOA3Q8NG57 546 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 RHBDD1Q8TEB9 315 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 MYCBPQ99417 103 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 CARD10Q9BWT7 1032 aa6.91□□□□□ -1.3
HMGB4-202ENST00000458277 BSDC1Q9NW68 430 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 IBTKQ9P2D0 1353 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 COL17A1Q9UMD9 1497 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 ARID1BQ8NFD5 2236 aaPredicted RBP6.91□□□□□ -1.3
HMGB4-202ENST00000458277 TTC36A6NLP5 189 aa6.9□□□□□ -1.3
HMGB4-202ENST00000458277 VGLL3A8MV65 326 aa6.9□□□□□ -1.3
HMGB4-202ENST00000458277 M0R082 166 aa6.9□□□□□ -1.3
HMGB4-202ENST00000458277 FBXO45P0C2W1 286 aa6.9□□□□□ -1.3
HMGB4-202ENST00000458277 TMEM132AQ24JP5 1023 aa6.9□□□□□ -1.3
HMGB4-202ENST00000458277 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms