RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 USP50Q70EL3 339 aaPredicted RBP21.78■■□□□ 1.08
SHF-202ENST00000458022 MCM10Q7L590 875 aa21.78■■□□□ 1.08
SHF-202ENST00000458022 GPR101Q96P66 508 aaPredicted RBP21.78■■□□□ 1.08
SHF-202ENST00000458022 BEGAINQ9BUH8 593 aa21.78■■□□□ 1.08
SHF-202ENST00000458022 NYXQ9GZU5 481 aa21.78■■□□□ 1.08
SHF-202ENST00000458022 HOXA10P31260 410 aaPredicted RBP21.77■■□□□ 1.08
SHF-202ENST00000458022 RGS19P49795 217 aa21.77■■□□□ 1.08
SHF-202ENST00000458022 CST9Q5W186 159 aa21.77■■□□□ 1.08
SHF-202ENST00000458022 CYP4F22Q6NT55 531 aa21.77■■□□□ 1.08
SHF-202ENST00000458022 LTBP1Q14766 1721 aa21.77■■□□□ 1.08
SHF-202ENST00000458022 MLLT1Q03111 559 aaPredicted RBP21.76■■□□□ 1.07
SHF-202ENST00000458022 RIC1Q4ADV7 1423 aa21.76■■□□□ 1.07
SHF-202ENST00000458022 PAXIP1Q6ZW49 1069 aaPredicted RBP21.76■■□□□ 1.07
SHF-202ENST00000458022 NUTM1Q86Y26 1132 aa21.76■■□□□ 1.07
SHF-202ENST00000458022 TLL2Q9Y6L7 1015 aa21.76■■□□□ 1.07
SHF-202ENST00000458022 CCDC85CA6NKD9 419 aa21.75■■□□□ 1.07
SHF-202ENST00000458022 LARGE2Q8N3Y3 721 aa21.75■■□□□ 1.07
SHF-202ENST00000458022 ERVV-1B6SEH8 477 aa21.74■■□□□ 1.07
SHF-202ENST00000458022 TRAF5O00463 557 aa21.74■■□□□ 1.07
SHF-202ENST00000458022 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
SHF-202ENST00000458022 MAP2K2P36507 400 aa21.74■■□□□ 1.07
SHF-202ENST00000458022 RPGRQ92834 1020 aaKnown RBP21.74■■□□□ 1.07
SHF-202ENST00000458022 CFAP53Q96M91 514 aa21.74■■□□□ 1.07
SHF-202ENST00000458022 IBTKQ9P2D0 1353 aaPredicted RBP21.74■■□□□ 1.07
SHF-202ENST00000458022 GRM1Q13255 1194 aa21.73■■□□□ 1.07
SHF-202ENST00000458022 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
SHF-202ENST00000458022 DCTN1Q14203 1278 aa21.73■■□□□ 1.07
SHF-202ENST00000458022 CRAMP1Q96RY5 1269 aa21.72■■□□□ 1.07
SHF-202ENST00000458022 NUDCQ9Y266 331 aa21.72■■□□□ 1.07
SHF-202ENST00000458022 TAF7Q15545 349 aaPredicted RBP21.71■■□□□ 1.07
SHF-202ENST00000458022 NIM1KQ8IY84 436 aa21.71■■□□□ 1.07
SHF-202ENST00000458022 MAP3K15Q6ZN16 1313 aa21.71■■□□□ 1.07
SHF-202ENST00000458022 PPEF1O14829 653 aaPredicted RBP21.7■■□□□ 1.06
SHF-202ENST00000458022 SLC51AQ86UW1 340 aa21.7■■□□□ 1.06
SHF-202ENST00000458022 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
SHF-202ENST00000458022 ADARB2Q9NS39 739 aaKnown RBP21.7■■□□□ 1.06
SHF-202ENST00000458022 UBN2Q6ZU65 1347 aa21.7■■□□□ 1.06
SHF-202ENST00000458022 CA12O43570 354 aa21.69■■□□□ 1.06
SHF-202ENST00000458022 AOC2O75106 756 aa21.69■■□□□ 1.06
SHF-202ENST00000458022 U2AF1L5P0DN76 240 aaPredicted RBP21.69■■□□□ 1.06
SHF-202ENST00000458022 U2AF1Q01081 240 aaKnown RBP eCLIP21.69■■□□□ 1.06
SHF-202ENST00000458022 SAPCD2Q86UD0 394 aa21.69■■□□□ 1.06
SHF-202ENST00000458022 GPRC5DQ9NZD1 345 aa21.69■■□□□ 1.06
SHF-202ENST00000458022 TSKSQ9UJT2 592 aa21.69■■□□□ 1.06
SHF-202ENST00000458022 TTLL7Q6ZT98 887 aa21.68■■□□□ 1.06
SHF-202ENST00000458022 NGEFQ8N5V2 710 aa21.68■■□□□ 1.06
SHF-202ENST00000458022 HHIPL1Q96JK4 782 aa21.68■■□□□ 1.06
SHF-202ENST00000458022 VPS33BQ9H267 617 aa21.68■■□□□ 1.06
SHF-202ENST00000458022 PPIP5K2O43314 1243 aa21.67■■□□□ 1.06
SHF-202ENST00000458022 GPTP24298 496 aa21.67■■□□□ 1.06
SHF-202ENST00000458022 SUSD4Q5VX71 490 aa21.67■■□□□ 1.06
SHF-202ENST00000458022 KIF6Q6ZMV9 814 aa21.67■■□□□ 1.06
SHF-202ENST00000458022 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
SHF-202ENST00000458022 CELF2O95319 508 aaKnown RBP21.66■■□□□ 1.06
SHF-202ENST00000458022 C3orf67Q6ZVT6 689 aa21.66■■□□□ 1.06
SHF-202ENST00000458022 ZNF34Q8IZ26 560 aa21.66■■□□□ 1.06
SHF-202ENST00000458022 MCOLN1Q9GZU1 580 aa21.66■■□□□ 1.06
SHF-202ENST00000458022 PGAP2Q9UHJ9 254 aa21.66■■□□□ 1.06
SHF-202ENST00000458022 TCERG1O14776 1098 aaKnown RBP21.65■■□□□ 1.06
SHF-202ENST00000458022 NTSR2O95665 410 aa21.65■■□□□ 1.06
SHF-202ENST00000458022 BRPF1P55201 1214 aaPredicted RBP21.65■■□□□ 1.06
SHF-202ENST00000458022 AOC3Q16853 763 aa21.65■■□□□ 1.06
SHF-202ENST00000458022 ZNRF3Q9ULT6 936 aa21.65■■□□□ 1.06
SHF-202ENST00000458022 CXCL9Q07325 125 aa21.64■■□□□ 1.05
SHF-202ENST00000458022 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.05
SHF-202ENST00000458022 PNISRQ8TF01 805 aaKnown RBP21.64■■□□□ 1.05
SHF-202ENST00000458022 ZBTB3Q9H5J0 574 aa21.64■■□□□ 1.05
SHF-202ENST00000458022 RRP7AQ9Y3A4 280 aaKnown RBP21.64■■□□□ 1.05
SHF-202ENST00000458022 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
SHF-202ENST00000458022 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.05
SHF-202ENST00000458022 CDHR2Q9BYE9 1310 aa21.63■■□□□ 1.05
SHF-202ENST00000458022 RTFDC1Q9BY42 306 aaPredicted RBP21.63■■□□□ 1.05
SHF-202ENST00000458022 GLIS2Q9BZE0 524 aaPredicted RBP21.63■■□□□ 1.05
SHF-202ENST00000458022 TMX4Q9H1E5 349 aaPredicted RBP21.63■■□□□ 1.05
SHF-202ENST00000458022 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
SHF-202ENST00000458022 MYL6BP14649 208 aa21.62■■□□□ 1.05
SHF-202ENST00000458022 GMPSP49915 693 aaPredicted RBP21.62■■□□□ 1.05
SHF-202ENST00000458022 EIF4A1P60842 406 aaKnown RBP21.62■■□□□ 1.05
SHF-202ENST00000458022 GIGYF2Q6Y7W6 1299 aaKnown RBP21.62■■□□□ 1.05
SHF-202ENST00000458022 SUPT20HQ8NEM7 779 aa21.62■■□□□ 1.05
SHF-202ENST00000458022 ZC3H15Q8WU90 426 aaKnown RBP21.62■■□□□ 1.05
SHF-202ENST00000458022 NLRP3Q96P20 1036 aa21.62■■□□□ 1.05
SHF-202ENST00000458022 TRPM7Q96QT4 1865 aa21.61■■□□□ 1.05
SHF-202ENST00000458022 PPP2R1AP30153 589 aa21.61■■□□□ 1.05
SHF-202ENST00000458022 PARP10Q53GL7 1025 aa21.61■■□□□ 1.05
SHF-202ENST00000458022 PPP1R42Q7Z4L9 355 aa21.61■■□□□ 1.05
SHF-202ENST00000458022 SLC10A5Q5PT55 438 aa21.6■■□□□ 1.05
SHF-202ENST00000458022 ERBB4Q15303 1308 aa21.59■■□□□ 1.05
SHF-202ENST00000458022 HIRAP54198 1017 aaPredicted RBP21.59■■□□□ 1.05
SHF-202ENST00000458022 CIAPIN1Q6FI81 312 aa21.59■■□□□ 1.05
SHF-202ENST00000458022 CFAP44Q96MT7 982 aa21.59■■□□□ 1.05
SHF-202ENST00000458022 ABCC4O15439 1325 aa21.58■■□□□ 1.05
SHF-202ENST00000458022 NUP98P52948 1817 aa21.58■■□□□ 1.05
SHF-202ENST00000458022 KIAA2012Q0VF49 1180 aa21.58■■□□□ 1.05
SHF-202ENST00000458022 NOGQ13253 232 aa21.58■■□□□ 1.05
SHF-202ENST00000458022 CDC37L1Q7L3B6 337 aa21.58■■□□□ 1.05
SHF-202ENST00000458022 DGKZQ13574 1117 aa21.57■■□□□ 1.04
SHF-202ENST00000458022 TNIP1Q15025 636 aa21.57■■□□□ 1.04
SHF-202ENST00000458022 DPP8Q6V1X1 898 aaPredicted RBP21.57■■□□□ 1.04
SHF-202ENST00000458022 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms