RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
ATG4A-206ENST00000457035 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 N4BP2Q86UW6 1770 aaPredicted RBP12.88□□□□□ -0.35
ATG4A-206ENST00000457035 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
ATG4A-206ENST00000457035 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 PI4KAP2A4QPH2 592 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 GPTP24298 496 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 TRIM28Q13263 835 aaKnown RBP12.87□□□□□ -0.35
ATG4A-206ENST00000457035 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 SUSD4Q5VX71 490 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 RIC3Q7Z5B4 369 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 ISCA1Q9BUE6 129 aa12.87□□□□□ -0.35
ATG4A-206ENST00000457035 DDX58O95786 925 aaKnown RBP12.86□□□□□ -0.35
ATG4A-206ENST00000457035 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
ATG4A-206ENST00000457035 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
ATG4A-206ENST00000457035 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
ATG4A-206ENST00000457035 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
ATG4A-206ENST00000457035 METTL22Q9BUU2 404 aaPredicted RBP12.86□□□□□ -0.35
ATG4A-206ENST00000457035 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
ATG4A-206ENST00000457035 ANKRD31Q8N7Z5 1873 aa12.86□□□□□ -0.35
ATG4A-206ENST00000457035 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
ATG4A-206ENST00000457035 ADCY9O60503 1353 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 ATP5J2-PTCD1G3V325 749 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
ATG4A-206ENST00000457035 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
ATG4A-206ENST00000457035 TGFB2P61812 414 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 SP7Q8TDD2 431 aaPredicted RBP12.85□□□□□ -0.35
ATG4A-206ENST00000457035 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
ATG4A-206ENST00000457035 KCNA3P22001 575 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 EVX2Q03828 476 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 FKBP5Q13451 457 aaPredicted RBP12.84□□□□□ -0.35
ATG4A-206ENST00000457035 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
ATG4A-206ENST00000457035 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 NTSR2O95665 410 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 MYD88Q99836 296 aa12.83□□□□□ -0.36
ATG4A-206ENST00000457035 UTP14AQ9BVJ6 771 aaKnown RBP12.83□□□□□ -0.36
ATG4A-206ENST00000457035 BRCA1P38398 1863 aaKnown RBP12.82□□□□□ -0.36
ATG4A-206ENST00000457035 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
ATG4A-206ENST00000457035 KLRG2A4D1S0 409 aaPredicted RBP12.82□□□□□ -0.36
ATG4A-206ENST00000457035 F6X3S4 739 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 DPEP1P16444 411 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 ST5P78524 1137 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 CCDC191Q8NCU4 936 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
ATG4A-206ENST00000457035 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
ATG4A-206ENST00000457035 GTF2E1P29083 439 aaPredicted RBP12.81□□□□□ -0.36
ATG4A-206ENST00000457035 CHRNA5P30532 468 aa12.81□□□□□ -0.36
ATG4A-206ENST00000457035 PDE6BP35913 854 aa12.81□□□□□ -0.36
ATG4A-206ENST00000457035 TRMT112Q9UI30 125 aaKnown RBP12.81□□□□□ -0.36
ATG4A-206ENST00000457035 NEURL1BA8MQ27 555 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 NPHP1O15259 732 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 BCAR3O75815 825 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
ATG4A-206ENST00000457035 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
ATG4A-206ENST00000457035 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 YTHDC1Q96MU7 727 aaKnown RBP12.8□□□□□ -0.36
ATG4A-206ENST00000457035 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
ATG4A-206ENST00000457035 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 PTPRCP08575 1304 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
ATG4A-206ENST00000457035 H0YIN7 160 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 SRGNP10124 158 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 ZBTB38Q8NAP3 1195 aaPredicted RBP12.79□□□□□ -0.36
ATG4A-206ENST00000457035 LINS1Q8NG48 757 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
ATG4A-206ENST00000457035 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
ATG4A-206ENST00000457035 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
ATG4A-206ENST00000457035 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
ATG4A-206ENST00000457035 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
ATG4A-206ENST00000457035 ARHGAP45Q92619 1136 aa12.78□□□□□ -0.36
ATG4A-206ENST00000457035 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
ATG4A-206ENST00000457035 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
ATG4A-206ENST00000457035 DDX60Q8IY21 1712 aaKnown RBP12.77□□□□□ -0.36
ATG4A-206ENST00000457035 LAMB2P55268 1798 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms