RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 TACC1O75410 805 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 EXOSC9Q06265 439 aaKnown RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 VWA3BQ502W6 1294 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 CCDC38Q502W7 563 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 CFAP157Q5JU67 520 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 AACSQ86V21 672 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 ARHGAP24Q8N264 748 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 INTS4Q96HW7 963 aaKnown RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 POTEDQ86YR6 584 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 ZC3H15Q8WU90 426 aaKnown RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 NAPBQ9H115 298 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 NLRP2Q9NX02 1062 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 SLC12A7Q9Y666 1083 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 CCDC194A0A1B0GVG4 234 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 STX6O43752 255 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 GIGYF1O75420 1035 aaPredicted RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 SLC5A1P13866 664 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 CALML3P27482 149 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 MAP3K9P80192 1104 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 CTNNBL1Q8WYA6 563 aaPredicted RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 PRXQ9BXM0 1461 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 RSRC1Q96IZ7 334 aaKnown RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 PTPN23Q9H3S7 1636 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 HDAC1Q13547 482 aaPredicted RBP4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 CCDC82Q8N4S0 544 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 AFAP1L2Q8N4X5 818 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 TRIM7Q9C029 511 aa4.6□□□□□ -1.67
PPP1R9A-208ENST00000456331 LAMC3Q9Y6N6 1575 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CTAGE15A4D2H0 777 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CTAGE9A4FU28 777 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CTAGE8P0CG41 777 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CCDC174Q6PII3 467 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 LRSAM1Q6UWE0 723 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CTAGE6Q86UF2 777 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CTAGE4Q8IX94 777 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 LRP2BPQ9P2M1 347 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 MTRF1LQ9UGC7 380 aaKnown RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 MCTP2Q6DN12 878 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 PODNQ7Z5L7 613 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 RAB3IL1Q8TBN0 382 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 FBXW7Q969H0 707 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 TSKSQ9UJT2 592 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 BTBD11A6QL63 1104 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 EBAG9O00559 213 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 MSH5O43196 834 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 URI1O94763 535 aaPredicted RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 SLC4A3P48751 1232 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 RASSF2P50749 326 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 SF3B2Q13435 895 aaKnown RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 NUCKS1Q9H1E3 243 aaKnown RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 FAM184BQ9ULE4 1060 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 ANKRD36BQ8N2N9 1353 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CCDC129Q6ZRS4 1044 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 FBF1Q8TES7 1133 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 BABAM1Q9NWV8 329 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 IQGAP2Q13576 1575 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 ARHGAP25P42331 645 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 VAV2P52735 878 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 MAP3K21Q5TCX8 1036 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 ZNF444Q8N0Y2 327 aaPredicted RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 GPR161Q8N6U8 529 aaKnown RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 DBF4Q9UBU7 674 aaPredicted RBP4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 CCDC61Q9Y6R9 512 aa4.59□□□□□ -1.67
PPP1R9A-208ENST00000456331 GAS8O95995 478 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 NT5C2P49902 561 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 VCXQ9H320 206 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 PPFIA1Q13136 1202 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 TRPC3Q13507 836 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 SETDB1Q15047 1291 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 GOLGA1Q92805 767 aa4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 TNPO1Q92973 898 aaKnown RBP4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 SCAF11Q99590 1463 aaKnown RBP4.59□□□□□ -1.68
PPP1R9A-208ENST00000456331 TAF7Q15545 349 aaPredicted RBP4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 MSL1Q68DK7 614 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 PLCD3Q8N3E9 789 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 PPFIBP2Q8ND30 876 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 FAM200AQ8TCP9 573 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 MKNK2Q9HBH9 465 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 MTUS1Q9ULD2 1270 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 PIK3R4Q99570 1358 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 GON4LQ3T8J9 2241 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 PSMA7O14818 248 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 GMNNO75496 209 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 CACNA2D3Q8IZS8 1091 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 RAB3IPQ96QF0 476 aaPredicted RBP4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 SENP3Q9H4L4 574 aaPredicted RBP4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 IMPACTQ9P2X3 320 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 FEZ2Q9UHY8 353 aaPredicted RBP4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 CFAP58Q5T655 872 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 TMOD4Q9NZQ9 345 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 LUC7L2Q9Y383 392 aaKnown RBP4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 TTC41PQ6P2S7 1318 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 SENP3-EIF4A1A0A087X0R7 540 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZWINTO95229 277 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 GBP1P32455 592 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 MATR3P43243 847 aaKnown RBP eCLIP4.58□□□□□ -1.684e-7■■■□□ 16.8
PPP1R9A-208ENST00000456331 BRAPQ7Z569 592 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 CNGA4Q8IV77 575 aa4.58□□□□□ -1.68
PPP1R9A-208ENST00000456331 NCOA7Q8NI08 942 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms