RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 LIG1P18858 919 aa22.44■■□□□ 1.18
SEMA3B-208ENST00000456210 TAF3Q5VWG9 929 aa22.44■■□□□ 1.18
SEMA3B-208ENST00000456210 GLRX3O76003 335 aaKnown RBP22.43■■□□□ 1.18
SEMA3B-208ENST00000456210 ZNF75DP51815 510 aa22.43■■□□□ 1.18
SEMA3B-208ENST00000456210 ME3Q16798 604 aa22.43■■□□□ 1.18
SEMA3B-208ENST00000456210 ADCK5Q3MIX3 580 aa22.43■■□□□ 1.18
SEMA3B-208ENST00000456210 ZSCAN25Q6NSZ9 544 aa22.43■■□□□ 1.18
SEMA3B-208ENST00000456210 DDX19AQ9NUU7 478 aaKnown RBP22.43■■□□□ 1.18
SEMA3B-208ENST00000456210 HSP90AB4PQ58FF6 505 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 TNMDQ9H2S6 317 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 C19orf44Q9H6X5 657 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 DDX41Q9UJV9 622 aaKnown RBP22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 TNNT1P13805 278 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 PDCP20941 246 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 PTH1RQ03431 593 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 LRMPQ12912 555 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 ANO6Q4KMQ2 910 aa22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 C16orf45Q96MC5 204 aaPredicted RBP22.42■■□□□ 1.18
SEMA3B-208ENST00000456210 CDC25BP30305 580 aa22.41■■□□□ 1.18
SEMA3B-208ENST00000456210 NECTIN1Q15223 517 aa22.41■■□□□ 1.18
SEMA3B-208ENST00000456210 SCAND2PQ9GZW5 306 aaPredicted RBP22.41■■□□□ 1.18
SEMA3B-208ENST00000456210 NPHP3Q7Z494 1330 aa22.41■■□□□ 1.18
SEMA3B-208ENST00000456210 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
SEMA3B-208ENST00000456210 LARP1BQ659C4 914 aaKnown RBP22.4■■□□□ 1.18
SEMA3B-208ENST00000456210 PRPF40BQ6NWY9 871 aaKnown RBP22.4■■□□□ 1.18
SEMA3B-208ENST00000456210 CLSTN2Q9H4D0 955 aa22.4■■□□□ 1.18
SEMA3B-208ENST00000456210 CDC37L1Q7L3B6 337 aa22.4■■□□□ 1.18
SEMA3B-208ENST00000456210 CAMK4Q16566 473 aa22.39■■□□□ 1.17
SEMA3B-208ENST00000456210 CCDC112Q8NEF3 446 aa22.39■■□□□ 1.17
SEMA3B-208ENST00000456210 DACT1Q9NYF0 836 aa22.39■■□□□ 1.17
SEMA3B-208ENST00000456210 MORC2Q9Y6X9 1032 aaPredicted RBP22.39■■□□□ 1.17
SEMA3B-208ENST00000456210 CAVIN2O95810 425 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 TRIM5Q9C035 493 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 NRBP1Q9UHY1 535 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 TPCN1Q9ULQ1 816 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 DRC7Q8IY82 874 aa22.38■■□□□ 1.17
SEMA3B-208ENST00000456210 ZKSCAN1P17029 563 aaPredicted RBP22.37■■□□□ 1.17
SEMA3B-208ENST00000456210 EYA1Q99502 592 aa22.37■■□□□ 1.17
SEMA3B-208ENST00000456210 ATF3P18847 181 aa22.37■■□□□ 1.17
SEMA3B-208ENST00000456210 CKAP2LQ8IYA6 745 aa22.37■■□□□ 1.17
SEMA3B-208ENST00000456210 NECAB1Q8N987 351 aa22.37■■□□□ 1.17
SEMA3B-208ENST00000456210 PIK3C2AO00443 1686 aa22.36■■□□□ 1.17
SEMA3B-208ENST00000456210 ALDH8A1Q9H2A2 487 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-208ENST00000456210 CACTINQ8WUQ7 758 aaKnown RBP22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 SARM1Q6SZW1 724 aa22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 KIF18AQ8NI77 898 aa22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 LEO1Q8WVC0 666 aaPredicted RBP22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 SPATA32Q96LK8 384 aa22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 SNRKQ9NRH2 765 aa22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 CLIP2Q9UDT6 1046 aa22.35■■□□□ 1.17
SEMA3B-208ENST00000456210 NEMFO60524 1076 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 PSMA5P28066 241 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 ZNF165P49910 485 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 TPD52L1Q16890 204 aaPredicted RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 HDGFL1Q5TGJ6 251 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 CREB3L3Q68CJ9 461 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 PHAXQ9H814 394 aaKnown RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 GOLGA6L4A6NEF3 574 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 GIGYF1O75420 1035 aaPredicted RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 NBPF7P0C2Y1 421 aaPredicted RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 RBM6P78332 1123 aaKnown RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 MTX1Q13505 466 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 ANKRD1Q15327 319 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 TAF7Q15545 349 aaPredicted RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 ZNF771Q7L3S4 317 aaPredicted RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 FERMT3Q86UX7 667 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 EVI5LQ96CN4 794 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 ECHDC1Q9NTX5 307 aa22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 RBM8AQ9Y5S9 174 aaKnown RBP22.34■■□□□ 1.17
SEMA3B-208ENST00000456210 DTNBO60941 627 aa22.33■■□□□ 1.17
SEMA3B-208ENST00000456210 CEP135Q66GS9 1140 aa22.33■■□□□ 1.17
SEMA3B-208ENST00000456210 MAP4K1Q92918 833 aa22.33■■□□□ 1.17
SEMA3B-208ENST00000456210 SOX12O15370 315 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 SLFN14P0C7P3 912 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 ESCO1Q5FWF5 840 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 FAM173BQ6P4H8 233 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 CLASRPQ8N2M8 674 aaKnown RBP22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 MYH15Q9Y2K3 1946 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 BEND3Q5T5X7 828 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 CCDC144CPQ8IYA2 1237 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 ZNF397Q8NF99 534 aaPredicted RBP22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 IL17REQ8NFR9 667 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 GPATCH3Q96I76 525 aa22.32■■□□□ 1.16
SEMA3B-208ENST00000456210 KDM3BQ7LBC6 1761 aa22.31■■□□□ 1.16
SEMA3B-208ENST00000456210 NYAP1Q6ZVC0 841 aa22.31■■□□□ 1.16
SEMA3B-208ENST00000456210 LRRC8AQ8IWT6 810 aa22.31■■□□□ 1.16
SEMA3B-208ENST00000456210 MRFAP1L1Q96HT8 127 aa22.31■■□□□ 1.16
SEMA3B-208ENST00000456210 FAM53CQ9NYF3 392 aa22.31■■□□□ 1.16
SEMA3B-208ENST00000456210 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
SEMA3B-208ENST00000456210 HIP1O00291 1037 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 IGSF3O75054 1194 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 CADPS2Q86UW7 1296 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 DNAJC25Q9H1X3 360 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 NR1I2O75469 434 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms