RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CRY2Q49AN0 593 aa31.02■■■□□ 2.56
PTPRA-208ENST00000455631 NUTM1Q86Y26 1132 aa31.02■■■□□ 2.56
PTPRA-208ENST00000455631 FMR1Q06787 632 aaKnown RBP eCLIP31.01■■■□□ 2.552e-6■■■■□ 22.7
PTPRA-208ENST00000455631 CAPNS2Q96L46 248 aa31.01■■■□□ 2.55
PTPRA-208ENST00000455631 BEGAINQ9BUH8 593 aa31.01■■■□□ 2.55
PTPRA-208ENST00000455631 NYXQ9GZU5 481 aa31.01■■■□□ 2.55
PTPRA-208ENST00000455631 TRPM7Q96QT4 1865 aa31■■■□□ 2.55
PTPRA-208ENST00000455631 SLC34A2O95436 690 aa31■■■□□ 2.55
PTPRA-208ENST00000455631 ECE1P42892 770 aa31■■■□□ 2.55
PTPRA-208ENST00000455631 CC2D2BQ6DHV5 1058 aa31■■■□□ 2.55
PTPRA-208ENST00000455631 RPGRQ92834 1020 aaKnown RBP31■■■□□ 2.55
PTPRA-208ENST00000455631 NUDCQ9Y266 331 aa31■■■□□ 2.55
PTPRA-208ENST00000455631 NUP98P52948 1817 aa30.99■■■□□ 2.55
PTPRA-208ENST00000455631 SCNN1DP51172 638 aa30.99■■■□□ 2.55
PTPRA-208ENST00000455631 LARGE2Q8N3Y3 721 aa30.99■■■□□ 2.55
PTPRA-208ENST00000455631 NGEFQ8N5V2 710 aa30.99■■■□□ 2.55
PTPRA-208ENST00000455631 U2AF1L5P0DN76 240 aaPredicted RBP30.98■■■□□ 2.55
PTPRA-208ENST00000455631 EPS15P42566 896 aa30.98■■■□□ 2.55
PTPRA-208ENST00000455631 U2AF1Q01081 240 aaKnown RBP eCLIP30.98■■■□□ 2.55
PTPRA-208ENST00000455631 CYP4F22Q6NT55 531 aa30.97■■■□□ 2.55
PTPRA-208ENST00000455631 CCDC85CA6NKD9 419 aa30.95■■■□□ 2.55
PTPRA-208ENST00000455631 GPR101Q96P66 508 aaPredicted RBP30.95■■■□□ 2.55
PTPRA-208ENST00000455631 TRAF5O00463 557 aa30.94■■■□□ 2.54
PTPRA-208ENST00000455631 USP50Q70EL3 339 aaPredicted RBP30.94■■■□□ 2.54
PTPRA-208ENST00000455631 RIC1Q4ADV7 1423 aa30.93■■■□□ 2.54
PTPRA-208ENST00000455631 GRIPAP1Q4V328 841 aa30.93■■■□□ 2.54
PTPRA-208ENST00000455631 SLC51AQ86UW1 340 aa30.93■■■□□ 2.54
PTPRA-208ENST00000455631 NIM1KQ8IY84 436 aa30.93■■■□□ 2.54
PTPRA-208ENST00000455631 MIS18AQ9NYP9 233 aa30.93■■■□□ 2.54
PTPRA-208ENST00000455631 MAP3K15Q6ZN16 1313 aa30.93■■■□□ 2.54
PTPRA-208ENST00000455631 ERVV-1B6SEH8 477 aa30.92■■■□□ 2.54
PTPRA-208ENST00000455631 TCERG1O14776 1098 aaKnown RBP30.92■■■□□ 2.54
PTPRA-208ENST00000455631 PPEF1O14829 653 aaPredicted RBP30.92■■■□□ 2.54
PTPRA-208ENST00000455631 HTATSF1O43719 755 aaKnown RBP30.92■■■□□ 2.54
PTPRA-208ENST00000455631 HOXA10P31260 410 aaPredicted RBP30.92■■■□□ 2.54
PTPRA-208ENST00000455631 TAF7Q15545 349 aaPredicted RBP30.92■■■□□ 2.54
PTPRA-208ENST00000455631 CST9Q5W186 159 aa30.92■■■□□ 2.54
PTPRA-208ENST00000455631 KIF6Q6ZMV9 814 aa30.92■■■□□ 2.54
PTPRA-208ENST00000455631 GPTP24298 496 aa30.91■■■□□ 2.54
PTPRA-208ENST00000455631 TSKSQ9UJT2 592 aa30.91■■■□□ 2.54
PTPRA-208ENST00000455631 TLL2Q9Y6L7 1015 aa30.91■■■□□ 2.54
PTPRA-208ENST00000455631 UBN2Q6ZU65 1347 aa30.91■■■□□ 2.54
PTPRA-208ENST00000455631 IBTKQ9P2D0 1353 aaPredicted RBP30.91■■■□□ 2.54
PTPRA-208ENST00000455631 RBM17Q96I25 401 aaKnown RBP30.9■■■□□ 2.54
PTPRA-208ENST00000455631 KDM3BQ7LBC6 1761 aa30.89■■■□□ 2.54
PTPRA-208ENST00000455631 MLLT1Q03111 559 aaPredicted RBP30.89■■■□□ 2.54
PTPRA-208ENST00000455631 PPIP5K2O43314 1243 aa30.88■■■□□ 2.53
PTPRA-208ENST00000455631 TTLL7Q6ZT98 887 aa30.88■■■□□ 2.53
PTPRA-208ENST00000455631 CRAMP1Q96RY5 1269 aa30.88■■■□□ 2.53
PTPRA-208ENST00000455631 ZBTB3Q9H5J0 574 aa30.88■■■□□ 2.53
PTPRA-208ENST00000455631 RRP7AQ9Y3A4 280 aaKnown RBP30.88■■■□□ 2.53
PTPRA-208ENST00000455631 AOC2O75106 756 aa30.87■■■□□ 2.53
PTPRA-208ENST00000455631 SUSD4Q5VX71 490 aa30.87■■■□□ 2.53
PTPRA-208ENST00000455631 MYL6BP14649 208 aa30.86■■■□□ 2.53
PTPRA-208ENST00000455631 AOC3Q16853 763 aa30.86■■■□□ 2.53
PTPRA-208ENST00000455631 ADARB2Q9NS39 739 aaKnown RBP30.86■■■□□ 2.53
PTPRA-208ENST00000455631 GPRC5DQ9NZD1 345 aa30.86■■■□□ 2.53
PTPRA-208ENST00000455631 MAP2K2P36507 400 aa30.84■■■□□ 2.53
PTPRA-208ENST00000455631 TMX4Q9H1E5 349 aaPredicted RBP30.84■■■□□ 2.53
PTPRA-208ENST00000455631 DLG5Q8TDM6 1919 aa30.84■■■□□ 2.53
PTPRA-208ENST00000455631 CELF2O95319 508 aaKnown RBP30.83■■■□□ 2.53
PTPRA-208ENST00000455631 C3orf67Q6ZVT6 689 aa30.83■■■□□ 2.53
PTPRA-208ENST00000455631 NTSR2O95665 410 aa30.82■■■□□ 2.52
PTPRA-208ENST00000455631 PPP2R1AP30153 589 aa30.82■■■□□ 2.52
PTPRA-208ENST00000455631 PNISRQ8TF01 805 aaKnown RBP30.82■■■□□ 2.52
PTPRA-208ENST00000455631 SAPCD2Q86UD0 394 aa30.81■■■□□ 2.52
PTPRA-208ENST00000455631 CFAP44Q96MT7 982 aa30.81■■■□□ 2.52
PTPRA-208ENST00000455631 RGS19P49795 217 aa30.8■■■□□ 2.52
PTPRA-208ENST00000455631 ZNF34Q8IZ26 560 aa30.8■■■□□ 2.52
PTPRA-208ENST00000455631 CA12O43570 354 aa30.79■■■□□ 2.52
PTPRA-208ENST00000455631 EIF4A1P60842 406 aaKnown RBP30.79■■■□□ 2.52
PTPRA-208ENST00000455631 CXCL9Q07325 125 aa30.79■■■□□ 2.52
PTPRA-208ENST00000455631 PPP1R42Q7Z4L9 355 aa30.79■■■□□ 2.52
PTPRA-208ENST00000455631 GLIS2Q9BZE0 524 aaPredicted RBP30.79■■■□□ 2.52
PTPRA-208ENST00000455631 ATP6V0A2Q9Y487 856 aa30.79■■■□□ 2.52
PTPRA-208ENST00000455631 GMPSP49915 693 aaPredicted RBP30.78■■■□□ 2.52
PTPRA-208ENST00000455631 NLRP3Q96P20 1036 aa30.78■■■□□ 2.52
PTPRA-208ENST00000455631 VPS33BQ9H267 617 aa30.78■■■□□ 2.52
PTPRA-208ENST00000455631 ZNF408Q9H9D4 720 aa30.78■■■□□ 2.52
PTPRA-208ENST00000455631 ZNRF3Q9ULT6 936 aa30.78■■■□□ 2.52
PTPRA-208ENST00000455631 NEFMP07197 916 aa30.77■■■□□ 2.52
PTPRA-208ENST00000455631 GIGYF2Q6Y7W6 1299 aaKnown RBP30.77■■■□□ 2.52
PTPRA-208ENST00000455631 SUPT20HQ8NEM7 779 aa30.77■■■□□ 2.52
PTPRA-208ENST00000455631 CASP8AP2Q9UKL3 1982 aa30.77■■■□□ 2.52
PTPRA-208ENST00000455631 MCOLN1Q9GZU1 580 aa30.76■■■□□ 2.51
PTPRA-208ENST00000455631 ABCC4O15439 1325 aa30.75■■■□□ 2.51
PTPRA-208ENST00000455631 BRPF1P55201 1214 aaPredicted RBP30.75■■■□□ 2.51
PTPRA-208ENST00000455631 HHIPL1Q96JK4 782 aa30.75■■■□□ 2.51
PTPRA-208ENST00000455631 PARP10Q53GL7 1025 aa30.74■■■□□ 2.51
PTPRA-208ENST00000455631 BCL2L13Q9BXK5 485 aa30.74■■■□□ 2.51
PTPRA-208ENST00000455631 CIAPIN1Q6FI81 312 aa30.73■■■□□ 2.51
PTPRA-208ENST00000455631 DPP8Q6V1X1 898 aaPredicted RBP30.73■■■□□ 2.51
PTPRA-208ENST00000455631 THUMPD2Q9BTF0 503 aaKnown RBP30.73■■■□□ 2.51
PTPRA-208ENST00000455631 CDHR2Q9BYE9 1310 aa30.73■■■□□ 2.51
PTPRA-208ENST00000455631 LAMB2P55268 1798 aa30.72■■■□□ 2.51
PTPRA-208ENST00000455631 UTP14AQ9BVJ6 771 aaKnown RBP30.72■■■□□ 2.51
PTPRA-208ENST00000455631 RTFDC1Q9BY42 306 aaPredicted RBP30.72■■■□□ 2.51
PTPRA-208ENST00000455631 ERBB4Q15303 1308 aa30.72■■■□□ 2.51
PTPRA-208ENST00000455631 RAD17O75943 681 aa30.71■■■□□ 2.51
PTPRA-208ENST00000455631 PGAP2Q9UHJ9 254 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms