RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 PHAXQ9H814 394 aaKnown RBP26.44■■□□□ 1.82
CCHCR1-209ENST00000455279 LAMB2P55268 1798 aa26.43■■□□□ 1.82
CCHCR1-209ENST00000455279 SNED1Q8TER0 1413 aa26.43■■□□□ 1.82
CCHCR1-209ENST00000455279 TAOK3Q9H2K8 898 aa26.43■■□□□ 1.82
CCHCR1-209ENST00000455279 SALL2Q9Y467 1007 aaPredicted RBP26.43■■□□□ 1.82
CCHCR1-209ENST00000455279 RIC1Q4ADV7 1423 aa26.42■■□□□ 1.82
CCHCR1-209ENST00000455279 TCIRG1Q13488 830 aa26.42■■□□□ 1.82
CCHCR1-209ENST00000455279 WWC1Q8IX03 1113 aa26.42■■□□□ 1.82
CCHCR1-209ENST00000455279 UTP14AQ9BVJ6 771 aaKnown RBP26.42■■□□□ 1.82
CCHCR1-209ENST00000455279 LTBP3Q9NS15 1303 aa26.41■■□□□ 1.82
CCHCR1-209ENST00000455279 PARP10Q53GL7 1025 aa26.41■■□□□ 1.82
CCHCR1-209ENST00000455279 DBF4Q9UBU7 674 aaPredicted RBP26.41■■□□□ 1.82
CCHCR1-209ENST00000455279 ATP5J2-PTCD1G3V325 749 aa26.4■■□□□ 1.82
CCHCR1-209ENST00000455279 HCLS1P14317 486 aaPredicted RBP26.4■■□□□ 1.82
CCHCR1-209ENST00000455279 CCDC93Q567U6 631 aa26.4■■□□□ 1.82
CCHCR1-209ENST00000455279 PPP1R42Q7Z4L9 355 aa26.4■■□□□ 1.82
CCHCR1-209ENST00000455279 TCERG1O14776 1098 aaKnown RBP26.39■■□□□ 1.82
CCHCR1-209ENST00000455279 PLBD2Q8NHP8 589 aa26.39■■□□□ 1.82
CCHCR1-209ENST00000455279 ZNF277Q9NRM2 450 aaPredicted RBP26.39■■□□□ 1.82
CCHCR1-209ENST00000455279 TAF1P21675 1872 aa26.38■■□□□ 1.81
CCHCR1-209ENST00000455279 GLTPD2A6NH11 291 aa26.38■■□□□ 1.81
CCHCR1-209ENST00000455279 POTECB2RU33 542 aa26.38■■□□□ 1.81
CCHCR1-209ENST00000455279 ANKRD13DQ6ZTN6 518 aa26.38■■□□□ 1.81
CCHCR1-209ENST00000455279 KDM2BQ8NHM5 1336 aa26.38■■□□□ 1.81
CCHCR1-209ENST00000455279 COL4A1P02462 1669 aa26.38■■□□□ 1.81
CCHCR1-209ENST00000455279 HOXA10P31260 410 aaPredicted RBP26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 CALD1Q05682 793 aaKnown RBP26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 CCDC27Q2M243 656 aa26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 SLC10A5Q5PT55 438 aa26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 RPGRQ92834 1020 aaKnown RBP26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 ISCA1Q9BUE6 129 aa26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 COL4A5P29400 1685 aa26.37■■□□□ 1.81
CCHCR1-209ENST00000455279 ALDH1B1P30837 517 aa26.36■■□□□ 1.81
CCHCR1-209ENST00000455279 DDX60Q8IY21 1712 aaKnown RBP26.36■■□□□ 1.81
CCHCR1-209ENST00000455279 ZC3H4Q9UPT8 1303 aaKnown RBP26.36■■□□□ 1.81
CCHCR1-209ENST00000455279 TOMM70O94826 608 aa26.35■■□□□ 1.81
CCHCR1-209ENST00000455279 FKBP4Q02790 459 aaKnown RBP eCLIP26.35■■□□□ 1.81
CCHCR1-209ENST00000455279 HSP90AB3PQ58FF7 597 aa26.35■■□□□ 1.81
CCHCR1-209ENST00000455279 FAM9BQ8IZU0 186 aa26.35■■□□□ 1.81
CCHCR1-209ENST00000455279 HYPKQ9NX55 129 aa26.35■■□□□ 1.81
CCHCR1-209ENST00000455279 TRMT112Q9UI30 125 aaKnown RBP26.35■■□□□ 1.81
CCHCR1-209ENST00000455279 SOGA3Q5TF21 947 aa26.34■■□□□ 1.81
CCHCR1-209ENST00000455279 SPINK5Q9NQ38 1064 aaPredicted RBP26.34■■□□□ 1.81
CCHCR1-209ENST00000455279 DDNO94850 711 aaPredicted RBP26.33■■□□□ 1.81
CCHCR1-209ENST00000455279 HSPA6P17066 643 aa26.33■■□□□ 1.81
CCHCR1-209ENST00000455279 RTL5Q5HYW3 569 aaPredicted RBP26.33■■□□□ 1.81
CCHCR1-209ENST00000455279 RBM17Q96I25 401 aaKnown RBP26.33■■□□□ 1.81
CCHCR1-209ENST00000455279 NLRP3Q96P20 1036 aa26.33■■□□□ 1.81
CCHCR1-209ENST00000455279 ABCC4O15439 1325 aa26.33■■□□□ 1.81
CCHCR1-209ENST00000455279 WDR90Q96KV7 1748 aa26.32■■□□□ 1.8
CCHCR1-209ENST00000455279 FAM89AQ96GI7 184 aa26.32■■□□□ 1.8
CCHCR1-209ENST00000455279 CRAMP1Q96RY5 1269 aa26.32■■□□□ 1.8
CCHCR1-209ENST00000455279 ZNF541Q9H0D2 1346 aa26.32■■□□□ 1.8
CCHCR1-209ENST00000455279 PPEF1O14829 653 aaPredicted RBP26.31■■□□□ 1.8
CCHCR1-209ENST00000455279 SH3TC1Q8TE82 1336 aa26.31■■□□□ 1.8
CCHCR1-209ENST00000455279 JARID2Q92833 1246 aaPredicted RBP26.3■■□□□ 1.8
CCHCR1-209ENST00000455279 G2E3Q7L622 706 aa26.29■■□□□ 1.8
CCHCR1-209ENST00000455279 RIC3Q7Z5B4 369 aa26.29■■□□□ 1.8
CCHCR1-209ENST00000455279 RTKN2Q8IZC4 609 aa26.29■■□□□ 1.8
CCHCR1-209ENST00000455279 RBM46Q8TBY0 533 aaKnown RBP26.29■■□□□ 1.8
CCHCR1-209ENST00000455279 MYD88Q99836 296 aa26.29■■□□□ 1.8
CCHCR1-209ENST00000455279 FANCIQ9NVI1 1328 aa26.29■■□□□ 1.8
CCHCR1-209ENST00000455279 HTRA3P83110 453 aa26.28■■□□□ 1.8
CCHCR1-209ENST00000455279 IARSP41252 1262 aaKnown RBP26.27■■□□□ 1.8
CCHCR1-209ENST00000455279 RNF123Q5XPI4 1314 aa26.27■■□□□ 1.8
CCHCR1-209ENST00000455279 IL16Q14005 1332 aa26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 POTEIP0CG38 1075 aa26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 POTEJP0CG39 1038 aa26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 GOLGA2Q08379 1002 aa26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 TWISTNBQ3B726 338 aaPredicted RBP26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 CCDC30Q5VVM6 783 aa26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 C16orf71Q8IYS4 520 aaPredicted RBP26.26■■□□□ 1.79
CCHCR1-209ENST00000455279 CEP350Q5VT06 3117 aa26.25■■□□□ 1.79
CCHCR1-209ENST00000455279 VEGFAP15692 232 aaPredicted RBP26.25■■□□□ 1.79
CCHCR1-209ENST00000455279 PSMD1Q99460 953 aa26.25■■□□□ 1.79
CCHCR1-209ENST00000455279 DPY19L2Q6NUT2 758 aa26.24■■□□□ 1.79
CCHCR1-209ENST00000455279 TRIM28Q13263 835 aaKnown RBP26.23■■□□□ 1.79
CCHCR1-209ENST00000455279 NCBP3Q53F19 620 aaKnown RBP26.23■■□□□ 1.79
CCHCR1-209ENST00000455279 MAP3K2Q9Y2U5 619 aa26.23■■□□□ 1.79
CCHCR1-209ENST00000455279 ATP6V0A2Q9Y487 856 aa26.23■■□□□ 1.79
CCHCR1-209ENST00000455279 EXOSC9Q06265 439 aaKnown RBP26.22■■□□□ 1.79
CCHCR1-209ENST00000455279 CELF1Q92879 486 aaKnown RBP26.22■■□□□ 1.79
CCHCR1-209ENST00000455279 FZD9O00144 591 aa26.21■■□□□ 1.79
CCHCR1-209ENST00000455279 IRS4O14654 1257 aaPredicted RBP26.21■■□□□ 1.79
CCHCR1-209ENST00000455279 GRAPQ13588 217 aa26.21■■□□□ 1.79
CCHCR1-209ENST00000455279 WDR63Q8IWG1 891 aa26.21■■□□□ 1.79
CCHCR1-209ENST00000455279 GRAPLQ8TC17 118 aaPredicted RBP26.21■■□□□ 1.79
CCHCR1-209ENST00000455279 METTL22Q9BUU2 404 aaPredicted RBP26.21■■□□□ 1.79
CCHCR1-209ENST00000455279 PI4KAP2A4QPH2 592 aa26.2■■□□□ 1.78
CCHCR1-209ENST00000455279 IGKV5-2P06315 115 aa26.2■■□□□ 1.78
CCHCR1-209ENST00000455279 CC2D2BQ6DHV5 1058 aa26.2■■□□□ 1.78
CCHCR1-209ENST00000455279 PI4KAP1Q8N8J0 262 aa26.2■■□□□ 1.78
CCHCR1-209ENST00000455279 DUOX1Q9NRD9 1551 aa26.2■■□□□ 1.78
CCHCR1-209ENST00000455279 VAMP4O75379 141 aa26.19■■□□□ 1.78
CCHCR1-209ENST00000455279 AOC3Q16853 763 aa26.19■■□□□ 1.78
CCHCR1-209ENST00000455279 DDX46Q7L014 1031 aaKnown RBP26.19■■□□□ 1.78
CCHCR1-209ENST00000455279 SLC4A2P04920 1241 aa26.18■■□□□ 1.78
CCHCR1-209ENST00000455279 LTBP1Q14766 1721 aa26.18■■□□□ 1.78
CCHCR1-209ENST00000455279 SF3B3Q15393 1217 aaKnown RBP26.18■■□□□ 1.78
CCHCR1-209ENST00000455279 LRRC37AA6NMS7 1700 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 445.2 ms