RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
SH3BP4-207ENST00000454947 COG6Q9Y2V7 657 aa11.86□□□□□ -0.51
SH3BP4-207ENST00000454947 NPHP1O15259 732 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 AAMPQ13685 434 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 FKBP8Q14318 412 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 CRBNQ96SW2 442 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 ZBTB40Q9NUA8 1239 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 LRP5O75197 1615 aa11.85□□□□□ -0.51
SH3BP4-207ENST00000454947 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 H7C1W4 665 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 GRM8O00222 908 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 NTSR2O95665 410 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 TM4SF1P30408 202 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 NFIXQ14938 502 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 TBC1D9BQ66K14 1250 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 SLC4A10Q6U841 1118 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 MEIS3Q99687 375 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 CDHR2Q9BYE9 1310 aa11.84□□□□□ -0.51
SH3BP4-207ENST00000454947 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 MMP10P09238 476 aa11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 DDR1Q08345 913 aa11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 ERICH6BQ5W0A0 696 aa11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 KAZALD1Q96I82 304 aa11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 SETDB2Q96T68 719 aa11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
SH3BP4-207ENST00000454947 PCCAP05165 728 aaPredicted RBP11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 NBPF7P0C2Y1 421 aaPredicted RBP11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 GPTP24298 496 aa11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
SH3BP4-207ENST00000454947 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 POLRMTO00411 1230 aaKnown RBP11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 GNAI3P08754 354 aa11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 MTX1Q13505 466 aa11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 RABL6Q3YEC7 729 aaPredicted RBP11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
SH3BP4-207ENST00000454947 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
SH3BP4-207ENST00000454947 IRX6P78412 446 aaPredicted RBP11.8□□□□□ -0.52
SH3BP4-207ENST00000454947 SLC10A5Q5PT55 438 aa11.8□□□□□ -0.52
SH3BP4-207ENST00000454947 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
SH3BP4-207ENST00000454947 NYXQ9GZU5 481 aa11.8□□□□□ -0.52
SH3BP4-207ENST00000454947 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
SH3BP4-207ENST00000454947 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 ANKRD31Q8N7Z5 1873 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 PTGER2P43116 358 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 ST5P78524 1137 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
SH3BP4-207ENST00000454947 GNAI2P04899 355 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 SERPINB2P05120 415 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 NEFLP07196 543 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 FOXO4P98177 505 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 PRR5LQ6MZQ0 368 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 CNBD1Q8NA66 436 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 MYH3P11055 1940 aa11.78□□□□□ -0.52
SH3BP4-207ENST00000454947 KLRG2A4D1S0 409 aaPredicted RBP11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 CSF1RP07333 972 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 CEP85Q6P2H3 762 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 FAM89AQ96GI7 184 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 PCDHB15Q9Y5E8 787 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.53
SH3BP4-207ENST00000454947 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 HSP90B1P14625 803 aaKnown RBP11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 CRY2Q49AN0 593 aa11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 ERFEQ4G0M1 354 aa11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 COL11A2P13942 1736 aaPredicted RBP11.76□□□□□ -0.53
SH3BP4-207ENST00000454947 COL4A1P02462 1669 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 CTSWP56202 376 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 POLA2Q14181 598 aa11.75□□□□□ -0.53
SH3BP4-207ENST00000454947 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms