RNA–Protein interactions for RNA: ENST00000454403.1

TUBBP2-201, Transcript of tubulin beta pseudogene 2, humanhuman

BASIC

Gene TUBBP2, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP2-201ENST00000454403 NPHP1O15259 732 aa12.96□□□□□ -0.33
TUBBP2-201ENST00000454403 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
TUBBP2-201ENST00000454403 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
TUBBP2-201ENST00000454403 TRMT112Q9UI30 125 aaKnown RBP12.96□□□□□ -0.33
TUBBP2-201ENST00000454403 NUP98P52948 1817 aa12.96□□□□□ -0.33
TUBBP2-201ENST00000454403 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.34
TUBBP2-201ENST00000454403 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.34
TUBBP2-201ENST00000454403 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 ATP5J2-PTCD1G3V325 749 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 DPEP1P16444 411 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 MYD88Q99836 296 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
TUBBP2-201ENST00000454403 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 SRGNP10124 158 aa12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 CRY2Q49AN0 593 aa12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
TUBBP2-201ENST00000454403 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 FAM177BA6PVY3 158 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 ALDH1L1O75891 902 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 STYK1Q6J9G0 422 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 C2CD5Q86YS7 1000 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 CHD4Q14839 1912 aa12.93□□□□□ -0.34
TUBBP2-201ENST00000454403 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 H7C1W4 665 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 NPR1P16066 1061 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 GCKRQ14397 625 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 API5Q9BZZ5 524 aaKnown RBP12.92□□□□□ -0.34
TUBBP2-201ENST00000454403 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
TUBBP2-201ENST00000454403 F6X3S4 739 aa12.91□□□□□ -0.34
TUBBP2-201ENST00000454403 CHRNA5P30532 468 aa12.91□□□□□ -0.34
TUBBP2-201ENST00000454403 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
TUBBP2-201ENST00000454403 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
TUBBP2-201ENST00000454403 NOB1Q9ULX3 412 aaKnown RBP12.91□□□□□ -0.34
TUBBP2-201ENST00000454403 CDHR2Q9BYE9 1310 aa12.9□□□□□ -0.34
TUBBP2-201ENST00000454403 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
TUBBP2-201ENST00000454403 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
TUBBP2-201ENST00000454403 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
TUBBP2-201ENST00000454403 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
TUBBP2-201ENST00000454403 SRCIN1Q9C0H9 1055 aa12.9□□□□□ -0.34
TUBBP2-201ENST00000454403 BCAR3O75815 825 aa12.89□□□□□ -0.35
TUBBP2-201ENST00000454403 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
TUBBP2-201ENST00000454403 SYNE4Q8N205 404 aa12.89□□□□□ -0.35
TUBBP2-201ENST00000454403 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
TUBBP2-201ENST00000454403 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
TUBBP2-201ENST00000454403 ABCC12Q96J65 1359 aa12.89□□□□□ -0.35
TUBBP2-201ENST00000454403 PDE8AO60658 829 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 BBOX1O75936 387 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 CASP7P55210 303 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 N4BP2Q86UW6 1770 aaPredicted RBP12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 UTYO14607 1347 aa12.88□□□□□ -0.35
TUBBP2-201ENST00000454403 ANKRD36CQ5JPF3 1778 aa12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 GRM8O00222 908 aa12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 RPGRQ92834 1020 aaKnown RBP12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 HDAC5Q9UQL6 1122 aa12.87□□□□□ -0.35
TUBBP2-201ENST00000454403 CSF1RP07333 972 aa12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 RCAN3Q9UKA8 241 aa12.86□□□□□ -0.35
TUBBP2-201ENST00000454403 MS4A1P11836 297 aa12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 TRIM27P14373 513 aa12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
TUBBP2-201ENST00000454403 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms