RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 RPGRQ92834 1020 aaKnown RBP13.97□□□□□ -0.17
LMCD1-205ENST00000454244 HSPA6P17066 643 aa13.96□□□□□ -0.17
LMCD1-205ENST00000454244 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
LMCD1-205ENST00000454244 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
LMCD1-205ENST00000454244 PLBD2Q8NHP8 589 aa13.96□□□□□ -0.17
LMCD1-205ENST00000454244 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
LMCD1-205ENST00000454244 NUP98P52948 1817 aa13.96□□□□□ -0.17
LMCD1-205ENST00000454244 RIC1Q4ADV7 1423 aa13.96□□□□□ -0.18
LMCD1-205ENST00000454244 SBF1O95248 1867 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 TNRC6CQ9HCJ0 1690 aaKnown RBP13.95□□□□□ -0.18
LMCD1-205ENST00000454244 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
LMCD1-205ENST00000454244 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 RTKN2Q8IZC4 609 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 C8orf58Q8NAV2 365 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
LMCD1-205ENST00000454244 NLRP3Q96P20 1036 aa13.95□□□□□ -0.18
LMCD1-205ENST00000454244 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
LMCD1-205ENST00000454244 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
LMCD1-205ENST00000454244 RBM46Q8TBY0 533 aaKnown RBP13.94□□□□□ -0.18
LMCD1-205ENST00000454244 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
LMCD1-205ENST00000454244 CRAMP1Q96RY5 1269 aa13.94□□□□□ -0.18
LMCD1-205ENST00000454244 ZNF277Q9NRM2 450 aaPredicted RBP13.94□□□□□ -0.18
LMCD1-205ENST00000454244 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
LMCD1-205ENST00000454244 RNF123Q5XPI4 1314 aa13.93□□□□□ -0.18
LMCD1-205ENST00000454244 ATP5J2-PTCD1G3V325 749 aa13.93□□□□□ -0.18
LMCD1-205ENST00000454244 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
LMCD1-205ENST00000454244 VEGFAP15692 232 aaPredicted RBP13.93□□□□□ -0.18
LMCD1-205ENST00000454244 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
LMCD1-205ENST00000454244 TSR2Q969E8 191 aaKnown RBP13.93□□□□□ -0.18
LMCD1-205ENST00000454244 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
LMCD1-205ENST00000454244 SH3TC1Q8TE82 1336 aa13.92□□□□□ -0.18
LMCD1-205ENST00000454244 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
LMCD1-205ENST00000454244 PPEF1O14829 653 aaPredicted RBP13.92□□□□□ -0.18
LMCD1-205ENST00000454244 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
LMCD1-205ENST00000454244 CC2D2BQ6DHV5 1058 aa13.92□□□□□ -0.18
LMCD1-205ENST00000454244 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
LMCD1-205ENST00000454244 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
LMCD1-205ENST00000454244 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
LMCD1-205ENST00000454244 FER1L6Q2WGJ9 1857 aa13.92□□□□□ -0.18
LMCD1-205ENST00000454244 ARFGEF2Q9Y6D5 1785 aa13.91□□□□□ -0.18
LMCD1-205ENST00000454244 DDNO94850 711 aaPredicted RBP13.91□□□□□ -0.18
LMCD1-205ENST00000454244 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
LMCD1-205ENST00000454244 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
LMCD1-205ENST00000454244 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
LMCD1-205ENST00000454244 POTECB2RU33 542 aa13.9□□□□□ -0.18
LMCD1-205ENST00000454244 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
LMCD1-205ENST00000454244 FSTL1Q12841 308 aa13.9□□□□□ -0.18
LMCD1-205ENST00000454244 PSMD1Q99460 953 aa13.9□□□□□ -0.18
LMCD1-205ENST00000454244 CACNA1SQ13698 1873 aa13.9□□□□□ -0.18
LMCD1-205ENST00000454244 TIAM2Q8IVF5 1701 aa13.9□□□□□ -0.18
LMCD1-205ENST00000454244 SNED1Q8TER0 1413 aa13.9□□□□□ -0.19
LMCD1-205ENST00000454244 ABCC4O15439 1325 aa13.9□□□□□ -0.19
LMCD1-205ENST00000454244 APLP1P51693 650 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
LMCD1-205ENST00000454244 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 SMC1BQ8NDV3 1235 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 CHMP4AQ9BY43 222 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 IL16Q14005 1332 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 ZNF541Q9H0D2 1346 aa13.89□□□□□ -0.19
LMCD1-205ENST00000454244 TRIM28Q13263 835 aaKnown RBP13.88□□□□□ -0.19
LMCD1-205ENST00000454244 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
LMCD1-205ENST00000454244 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
LMCD1-205ENST00000454244 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
LMCD1-205ENST00000454244 MYD88Q99836 296 aa13.88□□□□□ -0.19
LMCD1-205ENST00000454244 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
LMCD1-205ENST00000454244 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
LMCD1-205ENST00000454244 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
LMCD1-205ENST00000454244 BBOX1O75936 387 aa13.87□□□□□ -0.19
LMCD1-205ENST00000454244 DDX58O95786 925 aaKnown RBP13.87□□□□□ -0.19
LMCD1-205ENST00000454244 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
LMCD1-205ENST00000454244 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
LMCD1-205ENST00000454244 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
LMCD1-205ENST00000454244 FZD9O00144 591 aa13.86□□□□□ -0.19
LMCD1-205ENST00000454244 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
LMCD1-205ENST00000454244 GRAPQ13588 217 aa13.86□□□□□ -0.19
LMCD1-205ENST00000454244 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
LMCD1-205ENST00000454244 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
LMCD1-205ENST00000454244 GRAPLQ8TC17 118 aaPredicted RBP13.86□□□□□ -0.19
LMCD1-205ENST00000454244 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
LMCD1-205ENST00000454244 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
LMCD1-205ENST00000454244 WDR90Q96KV7 1748 aa13.85□□□□□ -0.19
LMCD1-205ENST00000454244 SF3B3Q15393 1217 aaKnown RBP13.85□□□□□ -0.19
LMCD1-205ENST00000454244 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
LMCD1-205ENST00000454244 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
LMCD1-205ENST00000454244 METTL22Q9BUU2 404 aaPredicted RBP13.85□□□□□ -0.19
LMCD1-205ENST00000454244 MAP3K2Q9Y2U5 619 aa13.85□□□□□ -0.19
LMCD1-205ENST00000454244 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
LMCD1-205ENST00000454244 IQCA1LA6NCM1 817 aa13.84□□□□□ -0.19
LMCD1-205ENST00000454244 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
LMCD1-205ENST00000454244 EIF6P56537 245 aaKnown RBP13.84□□□□□ -0.19
LMCD1-205ENST00000454244 HTRA3P83110 453 aa13.84□□□□□ -0.19
LMCD1-205ENST00000454244 DPP8Q6V1X1 898 aaPredicted RBP13.84□□□□□ -0.19
LMCD1-205ENST00000454244 KSR2Q6VAB6 950 aa13.84□□□□□ -0.19
LMCD1-205ENST00000454244 MPNDQ8N594 471 aa13.84□□□□□ -0.19
LMCD1-205ENST00000454244 ZBTB38Q8NAP3 1195 aaPredicted RBP13.84□□□□□ -0.19
LMCD1-205ENST00000454244 CCDC191Q8NCU4 936 aa13.84□□□□□ -0.19
LMCD1-205ENST00000454244 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms