RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 METTL22Q9BUU2 404 aaPredicted RBP25.49■■□□□ 1.67
PMPCB-205ENST00000453466 WWC3Q9ULE0 1092 aa25.49■■□□□ 1.67
PMPCB-205ENST00000453466 GRIN3BO60391 1043 aa25.48■■□□□ 1.67
PMPCB-205ENST00000453466 ERFEQ4G0M1 354 aa25.48■■□□□ 1.67
PMPCB-205ENST00000453466 MYD88Q99836 296 aa25.48■■□□□ 1.67
PMPCB-205ENST00000453466 TRMT112Q9UI30 125 aaKnown RBP25.48■■□□□ 1.67
PMPCB-205ENST00000453466 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.67
PMPCB-205ENST00000453466 NEXNQ0ZGT2 675 aa25.47■■□□□ 1.67
PMPCB-205ENST00000453466 DALRD3Q5D0E6 543 aaKnown RBP25.47■■□□□ 1.67
PMPCB-205ENST00000453466 BCS1LQ9Y276 419 aa25.47■■□□□ 1.67
PMPCB-205ENST00000453466 RRP1P56182 461 aaKnown RBP25.46■■□□□ 1.67
PMPCB-205ENST00000453466 KLRG2A4D1S0 409 aaPredicted RBP25.45■■□□□ 1.66
PMPCB-205ENST00000453466 ALDH1L2Q3SY69 923 aa25.45■■□□□ 1.66
PMPCB-205ENST00000453466 CCDC191Q8NCU4 936 aa25.45■■□□□ 1.66
PMPCB-205ENST00000453466 ZNF622Q969S3 477 aaKnown RBP eCLIP25.45■■□□□ 1.664e-7■□□□□ 9.1
PMPCB-205ENST00000453466 ADCY9O60503 1353 aa25.44■■□□□ 1.66
PMPCB-205ENST00000453466 SLC10A5Q5PT55 438 aa25.44■■□□□ 1.66
PMPCB-205ENST00000453466 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
PMPCB-205ENST00000453466 SRGNP10124 158 aa25.43■■□□□ 1.66
PMPCB-205ENST00000453466 RARSP54136 660 aaKnown RBP25.43■■□□□ 1.66
PMPCB-205ENST00000453466 MRPL50Q8N5N7 158 aaKnown RBP25.43■■□□□ 1.66
PMPCB-205ENST00000453466 TTLL6Q8N841 843 aa25.43■■□□□ 1.66
PMPCB-205ENST00000453466 DNAAF4Q8WXU2 420 aa25.43■■□□□ 1.66
PMPCB-205ENST00000453466 SSH1Q8WYL5 1049 aa25.43■■□□□ 1.66
PMPCB-205ENST00000453466 SH3TC1Q8TE82 1336 aa25.43■■□□□ 1.66
PMPCB-205ENST00000453466 STYK1Q6J9G0 422 aa25.42■■□□□ 1.66
PMPCB-205ENST00000453466 MASTLQ96GX5 879 aa25.42■■□□□ 1.66
PMPCB-205ENST00000453466 NLRP3Q96P20 1036 aa25.42■■□□□ 1.66
PMPCB-205ENST00000453466 CWC25Q9NXE8 425 aaPredicted RBP25.42■■□□□ 1.66
PMPCB-205ENST00000453466 NPR1P16066 1061 aa25.42■■□□□ 1.66
PMPCB-205ENST00000453466 N4BP2Q86UW6 1770 aaPredicted RBP25.42■■□□□ 1.66
PMPCB-205ENST00000453466 ABCC12Q96J65 1359 aa25.41■■□□□ 1.66
PMPCB-205ENST00000453466 CNKSR1Q969H4 720 aa25.41■■□□□ 1.66
PMPCB-205ENST00000453466 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.4■■□□□ 1.66
PMPCB-205ENST00000453466 FAM89AQ96GI7 184 aa25.4■■□□□ 1.66
PMPCB-205ENST00000453466 SMC4Q9NTJ3 1288 aa25.4■■□□□ 1.66
PMPCB-205ENST00000453466 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
PMPCB-205ENST00000453466 CACNA1FO60840 1977 aa25.39■■□□□ 1.66
PMPCB-205ENST00000453466 SYNE4Q8N205 404 aa25.39■■□□□ 1.66
PMPCB-205ENST00000453466 ZBTB38Q8NAP3 1195 aaPredicted RBP25.39■■□□□ 1.66
PMPCB-205ENST00000453466 BCL2L13Q9BXK5 485 aa25.39■■□□□ 1.66
PMPCB-205ENST00000453466 RIC1Q4ADV7 1423 aa25.39■■□□□ 1.65
PMPCB-205ENST00000453466 IGKV5-2P06315 115 aa25.38■■□□□ 1.65
PMPCB-205ENST00000453466 HSP90B1P14625 803 aaKnown RBP25.38■■□□□ 1.65
PMPCB-205ENST00000453466 CRY2Q49AN0 593 aa25.38■■□□□ 1.65
PMPCB-205ENST00000453466 ARFGEF2Q9Y6D5 1785 aa25.38■■□□□ 1.65
PMPCB-205ENST00000453466 HCLS1P14317 486 aaPredicted RBP25.37■■□□□ 1.65
PMPCB-205ENST00000453466 ALDH1B1P30837 517 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 LINS1Q8NG48 757 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 RPGRQ92834 1020 aaKnown RBP25.37■■□□□ 1.65
PMPCB-205ENST00000453466 ANKRD36CQ5JPF3 1778 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 ANKRD31Q8N7Z5 1873 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 PTPRCP08575 1304 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 NEURL1BA8MQ27 555 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 F6X3S4 739 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 BCAR3O75815 825 aa25.37■■□□□ 1.65
PMPCB-205ENST00000453466 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
PMPCB-205ENST00000453466 RTL5Q5HYW3 569 aaPredicted RBP25.37■■□□□ 1.65
PMPCB-205ENST00000453466 GOLGB1Q14789 3259 aaKnown RBP25.36■■□□□ 1.65
PMPCB-205ENST00000453466 CWF19L2Q2TBE0 894 aaKnown RBP25.36■■□□□ 1.65
PMPCB-205ENST00000453466 IRS4O14654 1257 aaPredicted RBP25.35■■□□□ 1.65
PMPCB-205ENST00000453466 BRPF1P55201 1214 aaPredicted RBP25.35■■□□□ 1.65
PMPCB-205ENST00000453466 ARHGAP27Q6ZUM4 889 aa25.35■■□□□ 1.65
PMPCB-205ENST00000453466 HOXA10P31260 410 aaPredicted RBP25.34■■□□□ 1.65
PMPCB-205ENST00000453466 RBM17Q96I25 401 aaKnown RBP25.34■■□□□ 1.65
PMPCB-205ENST00000453466 SLC4A10Q6U841 1118 aa25.33■■□□□ 1.65
PMPCB-205ENST00000453466 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
PMPCB-205ENST00000453466 GCKRQ14397 625 aa25.32■■□□□ 1.64
PMPCB-205ENST00000453466 BEND3Q5T5X7 828 aa25.32■■□□□ 1.64
PMPCB-205ENST00000453466 PRPF40BQ6NWY9 871 aaKnown RBP25.32■■□□□ 1.64
PMPCB-205ENST00000453466 CRAMP1Q96RY5 1269 aa25.32■■□□□ 1.64
PMPCB-205ENST00000453466 C21orf2O43822 256 aa25.3■■□□□ 1.64
PMPCB-205ENST00000453466 PLIN1O60240 522 aa25.3■■□□□ 1.64
PMPCB-205ENST00000453466 IRX6P78412 446 aaPredicted RBP25.3■■□□□ 1.64
PMPCB-205ENST00000453466 JARID2Q92833 1246 aaPredicted RBP25.3■■□□□ 1.64
PMPCB-205ENST00000453466 ZNF219Q9P2Y4 722 aaPredicted RBP25.3■■□□□ 1.64
PMPCB-205ENST00000453466 NOB1Q9ULX3 412 aaKnown RBP25.3■■□□□ 1.64
PMPCB-205ENST00000453466 CDHR2Q9BYE9 1310 aa25.29■■□□□ 1.64
PMPCB-205ENST00000453466 H7C1W4 665 aa25.29■■□□□ 1.64
PMPCB-205ENST00000453466 PDE8AO60658 829 aa25.29■■□□□ 1.64
PMPCB-205ENST00000453466 SF3B3Q15393 1217 aaKnown RBP25.29■■□□□ 1.64
PMPCB-205ENST00000453466 SOGA3Q5TF21 947 aa25.29■■□□□ 1.64
PMPCB-205ENST00000453466 DDX46Q7L014 1031 aaKnown RBP25.29■■□□□ 1.64
PMPCB-205ENST00000453466 SRCIN1Q9C0H9 1055 aa25.29■■□□□ 1.64
PMPCB-205ENST00000453466 BRCA1P38398 1863 aaKnown RBP25.29■■□□□ 1.64
PMPCB-205ENST00000453466 ALDH1L1O75891 902 aa25.28■■□□□ 1.64
PMPCB-205ENST00000453466 PDE3AQ14432 1141 aa25.28■■□□□ 1.64
PMPCB-205ENST00000453466 UTRNP46939 3433 aa25.28■■□□□ 1.64
PMPCB-205ENST00000453466 UBE3BQ7Z3V4 1068 aa25.27■■□□□ 1.64
PMPCB-205ENST00000453466 DLEC1Q9Y238 1755 aa25.27■■□□□ 1.64
PMPCB-205ENST00000453466 KIF16BQ96L93 1317 aa25.27■■□□□ 1.64
PMPCB-205ENST00000453466 COL11A2P13942 1736 aaPredicted RBP25.27■■□□□ 1.64
PMPCB-205ENST00000453466 API5Q9BZZ5 524 aaKnown RBP25.27■■□□□ 1.64
PMPCB-205ENST00000453466 TNRC6CQ9HCJ0 1690 aaKnown RBP25.26■■□□□ 1.63
PMPCB-205ENST00000453466 IPO8O15397 1037 aaKnown RBP25.26■■□□□ 1.63
PMPCB-205ENST00000453466 C7orf43Q8WVR3 580 aa25.26■■□□□ 1.63
PMPCB-205ENST00000453466 ARHGAP45Q92619 1136 aa25.25■■□□□ 1.63
PMPCB-205ENST00000453466 C9orf78Q9NZ63 289 aaPredicted RBP25.25■■□□□ 1.63
PMPCB-205ENST00000453466 BBOX1O75936 387 aa25.24■■□□□ 1.63
PMPCB-205ENST00000453466 CCDC152Q4G0S7 254 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms