RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 EIF6P56537 245 aaKnown RBP29.1■■■□□ 2.25
TNFRSF25-208ENST00000453341 DCTN1Q14203 1278 aa29.1■■■□□ 2.25
TNFRSF25-208ENST00000453341 CYP4F22Q6NT55 531 aa29.1■■■□□ 2.25
TNFRSF25-208ENST00000453341 LMOD1P29536 600 aaPredicted RBP29.09■■■□□ 2.25
TNFRSF25-208ENST00000453341 CST9Q5W186 159 aa29.08■■■□□ 2.25
TNFRSF25-208ENST00000453341 PAXIP1Q6ZW49 1069 aaPredicted RBP29.08■■■□□ 2.25
TNFRSF25-208ENST00000453341 RTF1Q92541 710 aaKnown RBP29.08■■■□□ 2.25
TNFRSF25-208ENST00000453341 LAMB4A4D0S4 1761 aa29.08■■■□□ 2.25
TNFRSF25-208ENST00000453341 NUP98P52948 1817 aa29.08■■■□□ 2.25
TNFRSF25-208ENST00000453341 TRAF5O00463 557 aa29.07■■■□□ 2.24
TNFRSF25-208ENST00000453341 CC2D2BQ6DHV5 1058 aa29.07■■■□□ 2.24
TNFRSF25-208ENST00000453341 GRM1Q13255 1194 aa29.06■■■□□ 2.24
TNFRSF25-208ENST00000453341 GPR101Q96P66 508 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF25-208ENST00000453341 ECE1P42892 770 aa29.05■■■□□ 2.24
TNFRSF25-208ENST00000453341 LARGE2Q8N3Y3 721 aa29.05■■■□□ 2.24
TNFRSF25-208ENST00000453341 NYXQ9GZU5 481 aa29.05■■■□□ 2.24
TNFRSF25-208ENST00000453341 CCDC85CA6NKD9 419 aa29.04■■■□□ 2.24
TNFRSF25-208ENST00000453341 HOXA10P31260 410 aaPredicted RBP29.04■■■□□ 2.24
TNFRSF25-208ENST00000453341 RIC1Q4ADV7 1423 aa29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 USP50Q70EL3 339 aaPredicted RBP29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 BEGAINQ9BUH8 593 aa29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 MIS18AQ9NYP9 233 aa29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 TSKSQ9UJT2 592 aa29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 TLL2Q9Y6L7 1015 aa29.03■■■□□ 2.24
TNFRSF25-208ENST00000453341 RPGRQ92834 1020 aaKnown RBP29.02■■■□□ 2.24
TNFRSF25-208ENST00000453341 CFAP53Q96M91 514 aa29.02■■■□□ 2.24
TNFRSF25-208ENST00000453341 UBN2Q6ZU65 1347 aa29.01■■■□□ 2.23
TNFRSF25-208ENST00000453341 ERVV-1B6SEH8 477 aa29.01■■■□□ 2.23
TNFRSF25-208ENST00000453341 AOC2O75106 756 aa29.01■■■□□ 2.23
TNFRSF25-208ENST00000453341 U2AF1L5P0DN76 240 aaPredicted RBP29.01■■■□□ 2.23
TNFRSF25-208ENST00000453341 RGS19P49795 217 aa29.01■■■□□ 2.23
TNFRSF25-208ENST00000453341 U2AF1Q01081 240 aaKnown RBP eCLIP29.01■■■□□ 2.23
TNFRSF25-208ENST00000453341 MAP3K15Q6ZN16 1313 aa29■■■□□ 2.23
TNFRSF25-208ENST00000453341 MLLT1Q03111 559 aaPredicted RBP29■■■□□ 2.23
TNFRSF25-208ENST00000453341 TAF7Q15545 349 aaPredicted RBP29■■■□□ 2.23
TNFRSF25-208ENST00000453341 TTLL7Q6ZT98 887 aa29■■■□□ 2.23
TNFRSF25-208ENST00000453341 TCERG1O14776 1098 aaKnown RBP28.99■■■□□ 2.23
TNFRSF25-208ENST00000453341 HTATSF1O43719 755 aaKnown RBP28.99■■■□□ 2.23
TNFRSF25-208ENST00000453341 GPTP24298 496 aa28.99■■■□□ 2.23
TNFRSF25-208ENST00000453341 C3orf67Q6ZVT6 689 aa28.99■■■□□ 2.23
TNFRSF25-208ENST00000453341 NUDCQ9Y266 331 aa28.99■■■□□ 2.23
TNFRSF25-208ENST00000453341 IBTKQ9P2D0 1353 aaPredicted RBP28.99■■■□□ 2.23
TNFRSF25-208ENST00000453341 PPEF1O14829 653 aaPredicted RBP28.98■■■□□ 2.23
TNFRSF25-208ENST00000453341 GRIPAP1Q4V328 841 aa28.98■■■□□ 2.23
TNFRSF25-208ENST00000453341 SUSD4Q5VX71 490 aa28.98■■■□□ 2.23
TNFRSF25-208ENST00000453341 CRAMP1Q96RY5 1269 aa28.98■■■□□ 2.23
TNFRSF25-208ENST00000453341 NIM1KQ8IY84 436 aa28.97■■■□□ 2.23
TNFRSF25-208ENST00000453341 CCER1Q8TC90 406 aaPredicted RBP28.97■■■□□ 2.23
TNFRSF25-208ENST00000453341 TNRC18O15417 2968 aaPredicted RBP28.96■■■□□ 2.23
TNFRSF25-208ENST00000453341 KDM3BQ7LBC6 1761 aa28.96■■■□□ 2.23
TNFRSF25-208ENST00000453341 RBM17Q96I25 401 aaKnown RBP28.96■■■□□ 2.23
TNFRSF25-208ENST00000453341 GPRC5DQ9NZD1 345 aa28.96■■■□□ 2.23
TNFRSF25-208ENST00000453341 CASP8AP2Q9UKL3 1982 aa28.95■■■□□ 2.23
TNFRSF25-208ENST00000453341 PPIP5K2O43314 1243 aa28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 MAP2K2P36507 400 aa28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 AOC3Q16853 763 aa28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 SAPCD2Q86UD0 394 aa28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 ZBTB3Q9H5J0 574 aa28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 ADARB2Q9NS39 739 aaKnown RBP28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 RRP7AQ9Y3A4 280 aaKnown RBP28.95■■■□□ 2.22
TNFRSF25-208ENST00000453341 NTSR2O95665 410 aa28.94■■■□□ 2.22
TNFRSF25-208ENST00000453341 KIF6Q6ZMV9 814 aa28.94■■■□□ 2.22
TNFRSF25-208ENST00000453341 ZNF34Q8IZ26 560 aa28.93■■■□□ 2.22
TNFRSF25-208ENST00000453341 CELF2O95319 508 aaKnown RBP28.92■■■□□ 2.22
TNFRSF25-208ENST00000453341 MYL6BP14649 208 aa28.92■■■□□ 2.22
TNFRSF25-208ENST00000453341 CXCL9Q07325 125 aa28.92■■■□□ 2.22
TNFRSF25-208ENST00000453341 DLG5Q8TDM6 1919 aa28.91■■■□□ 2.22
TNFRSF25-208ENST00000453341 GLIS2Q9BZE0 524 aaPredicted RBP28.91■■■□□ 2.22
TNFRSF25-208ENST00000453341 MCOLN1Q9GZU1 580 aa28.91■■■□□ 2.22
TNFRSF25-208ENST00000453341 PPP2R1AP30153 589 aa28.9■■■□□ 2.22
TNFRSF25-208ENST00000453341 GMPSP49915 693 aaPredicted RBP28.89■■■□□ 2.22
TNFRSF25-208ENST00000453341 EIF4A1P60842 406 aaKnown RBP28.89■■■□□ 2.22
TNFRSF25-208ENST00000453341 ATP6V0A2Q9Y487 856 aa28.89■■■□□ 2.22
TNFRSF25-208ENST00000453341 HHIPL1Q96JK4 782 aa28.88■■■□□ 2.21
TNFRSF25-208ENST00000453341 PGAP2Q9UHJ9 254 aa28.88■■■□□ 2.21
TNFRSF25-208ENST00000453341 ZNRF3Q9ULT6 936 aa28.88■■■□□ 2.21
TNFRSF25-208ENST00000453341 CA12O43570 354 aa28.87■■■□□ 2.21
TNFRSF25-208ENST00000453341 GIGYF2Q6Y7W6 1299 aaKnown RBP28.87■■■□□ 2.21
TNFRSF25-208ENST00000453341 RTFDC1Q9BY42 306 aaPredicted RBP28.87■■■□□ 2.21
TNFRSF25-208ENST00000453341 VPS33BQ9H267 617 aa28.87■■■□□ 2.21
TNFRSF25-208ENST00000453341 PDE4DIPQ5VU43 2346 aa28.87■■■□□ 2.21
TNFRSF25-208ENST00000453341 HIRAP54198 1017 aaPredicted RBP28.86■■■□□ 2.21
TNFRSF25-208ENST00000453341 BRPF1P55201 1214 aaPredicted RBP28.86■■■□□ 2.21
TNFRSF25-208ENST00000453341 PNISRQ8TF01 805 aaKnown RBP28.86■■■□□ 2.21
TNFRSF25-208ENST00000453341 ABCC4O15439 1325 aa28.86■■■□□ 2.21
TNFRSF25-208ENST00000453341 NLRP3Q96P20 1036 aa28.85■■■□□ 2.21
TNFRSF25-208ENST00000453341 CFAP44Q96MT7 982 aa28.84■■■□□ 2.21
TNFRSF25-208ENST00000453341 ZNF408Q9H9D4 720 aa28.84■■■□□ 2.21
TNFRSF25-208ENST00000453341 CIAPIN1Q6FI81 312 aa28.83■■■□□ 2.21
TNFRSF25-208ENST00000453341 PPP1R42Q7Z4L9 355 aa28.83■■■□□ 2.21
TNFRSF25-208ENST00000453341 TRPM4Q8TD43 1214 aa28.83■■■□□ 2.21
TNFRSF25-208ENST00000453341 ZIC5Q96T25 663 aa28.83■■■□□ 2.21
TNFRSF25-208ENST00000453341 THUMPD2Q9BTF0 503 aaKnown RBP28.83■■■□□ 2.21
TNFRSF25-208ENST00000453341 LAMB2P55268 1798 aa28.83■■■□□ 2.21
TNFRSF25-208ENST00000453341 SLC10A5Q5PT55 438 aa28.82■■■□□ 2.2
TNFRSF25-208ENST00000453341 LRP10Q7Z4F1 713 aa28.82■■■□□ 2.2
TNFRSF25-208ENST00000453341 SUPT20HQ8NEM7 779 aa28.82■■■□□ 2.2
TNFRSF25-208ENST00000453341 TMX4Q9H1E5 349 aaPredicted RBP28.82■■■□□ 2.2
TNFRSF25-208ENST00000453341 CDHR2Q9BYE9 1310 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms