RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 CNKSR1Q969H4 720 aa19.88■□□□□ 0.77
VPS8-213ENST00000453056 PHAXQ9H814 394 aaKnown RBP19.88■□□□□ 0.77
VPS8-213ENST00000453056 SRGNP10124 158 aa19.87■□□□□ 0.77
VPS8-213ENST00000453056 NPR1P16066 1061 aa19.87■□□□□ 0.77
VPS8-213ENST00000453056 ERFEQ4G0M1 354 aa19.87■□□□□ 0.77
VPS8-213ENST00000453056 TCERG1O14776 1098 aaKnown RBP19.86■□□□□ 0.77
VPS8-213ENST00000453056 VAMP4O75379 141 aa19.86■□□□□ 0.77
VPS8-213ENST00000453056 SLC4A2P04920 1241 aa19.86■□□□□ 0.77
VPS8-213ENST00000453056 ARHGAP27Q6ZUM4 889 aa19.86■□□□□ 0.77
VPS8-213ENST00000453056 SH3TC1Q8TE82 1336 aa19.85■□□□□ 0.77
VPS8-213ENST00000453056 KLRG2A4D1S0 409 aaPredicted RBP19.85■□□□□ 0.77
VPS8-213ENST00000453056 ISCA1Q9BUE6 129 aa19.85■□□□□ 0.77
VPS8-213ENST00000453056 TRMT112Q9UI30 125 aaKnown RBP19.85■□□□□ 0.77
VPS8-213ENST00000453056 SLX4Q8IY92 1834 aa19.84■□□□□ 0.77
VPS8-213ENST00000453056 ATP5J2-PTCD1G3V325 749 aa19.84■□□□□ 0.77
VPS8-213ENST00000453056 TRIM28Q13263 835 aaKnown RBP19.84■□□□□ 0.77
VPS8-213ENST00000453056 RPGRQ92834 1020 aaKnown RBP19.84■□□□□ 0.77
VPS8-213ENST00000453056 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
VPS8-213ENST00000453056 NEXNQ0ZGT2 675 aa19.83■□□□□ 0.77
VPS8-213ENST00000453056 FLIIQ13045 1269 aa19.83■□□□□ 0.77
VPS8-213ENST00000453056 SOGA3Q5TF21 947 aa19.83■□□□□ 0.77
VPS8-213ENST00000453056 PRPF40BQ6NWY9 871 aaKnown RBP19.83■□□□□ 0.77
VPS8-213ENST00000453056 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
VPS8-213ENST00000453056 MYD88Q99836 296 aa19.83■□□□□ 0.77
VPS8-213ENST00000453056 FKBP5Q13451 457 aaPredicted RBP19.82■□□□□ 0.76
VPS8-213ENST00000453056 CRY2Q49AN0 593 aa19.82■□□□□ 0.76
VPS8-213ENST00000453056 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
VPS8-213ENST00000453056 METTL22Q9BUU2 404 aaPredicted RBP19.82■□□□□ 0.76
VPS8-213ENST00000453056 MAP3K2Q9Y2U5 619 aa19.82■□□□□ 0.76
VPS8-213ENST00000453056 LAMB2P55268 1798 aa19.82■□□□□ 0.76
VPS8-213ENST00000453056 PI4KAP2A4QPH2 592 aa19.81■□□□□ 0.76
VPS8-213ENST00000453056 HSP90B1P14625 803 aaKnown RBP19.81■□□□□ 0.76
VPS8-213ENST00000453056 ALDH1B1P30837 517 aa19.81■□□□□ 0.76
VPS8-213ENST00000453056 SLC10A5Q5PT55 438 aa19.81■□□□□ 0.76
VPS8-213ENST00000453056 PI4KAP1Q8N8J0 262 aa19.81■□□□□ 0.76
VPS8-213ENST00000453056 ADCY9O60503 1353 aa19.81■□□□□ 0.76
VPS8-213ENST00000453056 SBF1O95248 1867 aa19.8■□□□□ 0.76
VPS8-213ENST00000453056 G2E3Q7L622 706 aa19.8■□□□□ 0.76
VPS8-213ENST00000453056 CCDC191Q8NCU4 936 aa19.8■□□□□ 0.76
VPS8-213ENST00000453056 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
VPS8-213ENST00000453056 CWC25Q9NXE8 425 aaPredicted RBP19.8■□□□□ 0.76
VPS8-213ENST00000453056 FER1L6Q2WGJ9 1857 aa19.79■□□□□ 0.76
VPS8-213ENST00000453056 DDX60Q8IY21 1712 aaKnown RBP19.79■□□□□ 0.76
VPS8-213ENST00000453056 C21orf2O43822 256 aa19.79■□□□□ 0.76
VPS8-213ENST00000453056 HNRNPUQ00839 825 aaKnown RBP eCLIP19.79■□□□□ 0.76
VPS8-213ENST00000453056 ZNF428Q96B54 188 aa19.79■□□□□ 0.76
VPS8-213ENST00000453056 HCLS1P14317 486 aaPredicted RBP19.78■□□□□ 0.76
VPS8-213ENST00000453056 CDCA7LQ96GN5 454 aa19.78■□□□□ 0.76
VPS8-213ENST00000453056 ZNF219Q9P2Y4 722 aaPredicted RBP19.78■□□□□ 0.76
VPS8-213ENST00000453056 CCDC88AQ3V6T2 1871 aa19.77■□□□□ 0.76
VPS8-213ENST00000453056 HOXA10P31260 410 aaPredicted RBP19.77■□□□□ 0.76
VPS8-213ENST00000453056 CCDC93Q567U6 631 aa19.77■□□□□ 0.76
VPS8-213ENST00000453056 ZBTB38Q8NAP3 1195 aaPredicted RBP19.77■□□□□ 0.76
VPS8-213ENST00000453056 DNAAF4Q8WXU2 420 aa19.77■□□□□ 0.76
VPS8-213ENST00000453056 FAM89AQ96GI7 184 aa19.77■□□□□ 0.76
VPS8-213ENST00000453056 CT47B1P0C2W7 299 aaPredicted RBP19.76■□□□□ 0.75
VPS8-213ENST00000453056 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
VPS8-213ENST00000453056 CRAMP1Q96RY5 1269 aa19.76■□□□□ 0.75
VPS8-213ENST00000453056 MYH3P11055 1940 aa19.75■□□□□ 0.75
VPS8-213ENST00000453056 IRS4O14654 1257 aaPredicted RBP19.75■□□□□ 0.75
VPS8-213ENST00000453056 PCCAP05165 728 aaPredicted RBP19.75■□□□□ 0.75
VPS8-213ENST00000453056 RASSF7Q02833 373 aa19.75■□□□□ 0.75
VPS8-213ENST00000453056 C9orf131Q5VYM1 1079 aa19.75■□□□□ 0.75
VPS8-213ENST00000453056 TRMT2AQ8IZ69 625 aaKnown RBP19.75■□□□□ 0.75
VPS8-213ENST00000453056 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
VPS8-213ENST00000453056 ZNF784Q8NCA9 323 aaPredicted RBP19.75■□□□□ 0.75
VPS8-213ENST00000453056 TAOK3Q9H2K8 898 aa19.75■□□□□ 0.75
VPS8-213ENST00000453056 RNF181Q9P0P0 153 aa19.75■□□□□ 0.75
VPS8-213ENST00000453056 LMNB1P20700 586 aa19.74■□□□□ 0.75
VPS8-213ENST00000453056 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
VPS8-213ENST00000453056 DDX46Q7L014 1031 aaKnown RBP19.74■□□□□ 0.75
VPS8-213ENST00000453056 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
VPS8-213ENST00000453056 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
VPS8-213ENST00000453056 NEURL1BA8MQ27 555 aa19.73■□□□□ 0.75
VPS8-213ENST00000453056 NFKBIEO00221 500 aa19.73■□□□□ 0.75
VPS8-213ENST00000453056 IGKV5-2P06315 115 aa19.73■□□□□ 0.75
VPS8-213ENST00000453056 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
VPS8-213ENST00000453056 RTKN2Q8IZC4 609 aa19.73■□□□□ 0.75
VPS8-213ENST00000453056 LTBP3Q9NS15 1303 aa19.73■□□□□ 0.75
VPS8-213ENST00000453056 PPEF1O14829 653 aaPredicted RBP19.72■□□□□ 0.75
VPS8-213ENST00000453056 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
VPS8-213ENST00000453056 TIAM2Q8IVF5 1701 aa19.72■□□□□ 0.75
VPS8-213ENST00000453056 LINS1Q8NG48 757 aa19.72■□□□□ 0.75
VPS8-213ENST00000453056 C7orf43Q8WVR3 580 aa19.72■□□□□ 0.75
VPS8-213ENST00000453056 ABCC4O15439 1325 aa19.72■□□□□ 0.75
VPS8-213ENST00000453056 ZC3H4Q9UPT8 1303 aaKnown RBP19.72■□□□□ 0.75
VPS8-213ENST00000453056 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
VPS8-213ENST00000453056 GRIPAP1Q4V328 841 aa19.71■□□□□ 0.75
VPS8-213ENST00000453056 CDHR2Q9BYE9 1310 aa19.71■□□□□ 0.75
VPS8-213ENST00000453056 GRAPQ13588 217 aa19.7■□□□□ 0.74
VPS8-213ENST00000453056 SF3B3Q15393 1217 aaKnown RBP19.7■□□□□ 0.74
VPS8-213ENST00000453056 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
VPS8-213ENST00000453056 GRAPLQ8TC17 118 aaPredicted RBP19.7■□□□□ 0.74
VPS8-213ENST00000453056 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
VPS8-213ENST00000453056 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
VPS8-213ENST00000453056 PTPRCP08575 1304 aa19.7■□□□□ 0.74
VPS8-213ENST00000453056 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
VPS8-213ENST00000453056 F6X3S4 739 aa19.69■□□□□ 0.74
VPS8-213ENST00000453056 PDE8AO60658 829 aa19.69■□□□□ 0.74
VPS8-213ENST00000453056 CCDC152Q4G0S7 254 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms