RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 NUDT16Q96DE0 195 aaKnown RBP8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 ASB16Q96NS5 453 aa8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 BRD7Q9NPI1 651 aa8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 USP20Q9Y2K6 914 aa8.64□□□□□ -1.03
HMGB1P26-201ENST00000452520 FAM157BP0CG42 384 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 TMC7Q7Z402 723 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 CMTR1Q8N1G2 835 aaKnown RBP8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 GTPBP3Q969Y2 492 aaKnown RBP8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 GGNBP2Q9H3C7 697 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
HMGB1P26-201ENST00000452520 ANKRD33BA6NCL7 494 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 KHNYNO15037 678 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 EFSO43281 561 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 EPB42P16452 691 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 PCSK2P16519 638 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 ERCC3P19447 782 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 KCNQ4P56696 695 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 SFSWAPQ12872 951 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 GJD3Q8N144 294 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 KCNMB2Q9Y691 235 aa8.62□□□□□ -1.03
HMGB1P26-201ENST00000452520 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 FOXR1Q6PIV2 292 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 SV2AQ7L0J3 742 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 FAM129BQ96TA1 746 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 FNDC3AQ9Y2H6 1198 aaKnown RBP8.61□□□□□ -1.03
HMGB1P26-201ENST00000452520 CDC14CA4D256 554 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 IGHA2P01877 340 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 C8orf34Q49A92 452 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 TTC16Q8NEE8 873 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 ABHD17AQ96GS6 310 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 STRN4Q9NRL3 753 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 HCN2Q9UL51 889 aa8.6□□□□□ -1.03
HMGB1P26-201ENST00000452520 TRIP4Q15650 581 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P26-201ENST00000452520 DMRTB1Q96MA1 342 aa8.59□□□□□ -1.03
HMGB1P26-201ENST00000452520 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P26-201ENST00000452520 UBAP1LF5GYI3 381 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 EGFRP00533 1210 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 VEGFBP49765 207 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 PLCB3Q01970 1234 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 EHHADHQ08426 723 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 TRERF1Q96PN7 1200 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 PHF24Q9UPV7 400 aa8.58□□□□□ -1.04
HMGB1P26-201ENST00000452520 A6NHS1 94 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GPR25O00155 361 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GPR182O15218 404 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 TREHO43280 583 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 XYLBO75191 536 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 DSC3Q14574 896 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 GSX2Q9BZM3 304 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
HMGB1P26-201ENST00000452520 CD33P20138 364 aa8.56□□□□□ -1.04
HMGB1P26-201ENST00000452520 H3BM21 787 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 FGFR3P22607 806 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 CTBSQ01459 385 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 CCINQ13939 588 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 COL19A1Q14993 1142 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 PDE12Q6L8Q7 609 aaKnown RBP8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 ZNF438Q7Z4V0 828 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 ALKBH8Q96BT7 664 aaKnown RBP8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
HMGB1P26-201ENST00000452520 SASH3O75995 380 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 TARSP26639 723 aaKnown RBP8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 NLRP13Q86W25 1043 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 GPR161Q8N6U8 529 aaKnown RBP8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
HMGB1P26-201ENST00000452520 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
HMGB1P26-201ENST00000452520 TMEM63CQ9P1W3 806 aa8.53□□□□□ -1.04
HMGB1P26-201ENST00000452520 TNFRSF21O75509 655 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 NEFLP07196 543 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 FMR1Q06787 632 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 KRT25Q7Z3Z0 450 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 ZFATQ9P243 1243 aa8.52□□□□□ -1.05
HMGB1P26-201ENST00000452520 C2CD2LO14523 706 aa8.51□□□□□ -1.05
HMGB1P26-201ENST00000452520 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms