RNA–Protein interactions for RNA: ENST00000452505.1

LINC01640-201, Transcript of long intergenic non-protein coding RNA 1640, humanhuman

TSL 4 BASIC

Gene LINC01640, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01640-201ENST00000452505 ZNF219Q9P2Y4 722 aaPredicted RBP21.53■■□□□ 1.04
LINC01640-201ENST00000452505 LMNB1P20700 586 aa21.52■■□□□ 1.04
LINC01640-201ENST00000452505 ANKRD13DQ6ZTN6 518 aa21.52■■□□□ 1.04
LINC01640-201ENST00000452505 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.04
LINC01640-201ENST00000452505 CACNA1FO60840 1977 aa21.52■■□□□ 1.04
LINC01640-201ENST00000452505 PRELPP51888 382 aa21.51■■□□□ 1.03
LINC01640-201ENST00000452505 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
LINC01640-201ENST00000452505 NLRP10Q86W26 655 aa21.51■■□□□ 1.03
LINC01640-201ENST00000452505 CHMP4AQ9BY43 222 aa21.51■■□□□ 1.03
LINC01640-201ENST00000452505 RNF123Q5XPI4 1314 aa21.51■■□□□ 1.03
LINC01640-201ENST00000452505 ALDH1B1P30837 517 aa21.5■■□□□ 1.03
LINC01640-201ENST00000452505 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
LINC01640-201ENST00000452505 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
LINC01640-201ENST00000452505 C7orf43Q8WVR3 580 aa21.5■■□□□ 1.03
LINC01640-201ENST00000452505 ZC3H4Q9UPT8 1303 aaKnown RBP21.5■■□□□ 1.03
LINC01640-201ENST00000452505 SLC10A5Q5PT55 438 aa21.49■■□□□ 1.03
LINC01640-201ENST00000452505 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
LINC01640-201ENST00000452505 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
LINC01640-201ENST00000452505 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
LINC01640-201ENST00000452505 LTBP3Q9NS15 1303 aa21.49■■□□□ 1.03
LINC01640-201ENST00000452505 DDX60Q8IY21 1712 aaKnown RBP21.48■■□□□ 1.03
LINC01640-201ENST00000452505 HOXA10P31260 410 aaPredicted RBP21.47■■□□□ 1.03
LINC01640-201ENST00000452505 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
LINC01640-201ENST00000452505 TAOK3Q9H2K8 898 aa21.47■■□□□ 1.03
LINC01640-201ENST00000452505 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
LINC01640-201ENST00000452505 GOLGA2Q08379 1002 aa21.46■■□□□ 1.03
LINC01640-201ENST00000452505 CCDC93Q567U6 631 aa21.46■■□□□ 1.03
LINC01640-201ENST00000452505 NLRP3Q96P20 1036 aa21.46■■□□□ 1.03
LINC01640-201ENST00000452505 ISCA1Q9BUE6 129 aa21.46■■□□□ 1.03
LINC01640-201ENST00000452505 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
LINC01640-201ENST00000452505 KIF3CO14782 793 aa21.45■■□□□ 1.02
LINC01640-201ENST00000452505 TWISTNBQ3B726 338 aaPredicted RBP21.45■■□□□ 1.02
LINC01640-201ENST00000452505 C3orf67Q6ZVT6 689 aa21.45■■□□□ 1.02
LINC01640-201ENST00000452505 TRMT112Q9UI30 125 aaKnown RBP21.45■■□□□ 1.02
LINC01640-201ENST00000452505 RIC3Q7Z5B4 369 aa21.44■■□□□ 1.02
LINC01640-201ENST00000452505 RBM17Q96I25 401 aaKnown RBP21.44■■□□□ 1.02
LINC01640-201ENST00000452505 CRAMP1Q96RY5 1269 aa21.44■■□□□ 1.02
LINC01640-201ENST00000452505 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
LINC01640-201ENST00000452505 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
LINC01640-201ENST00000452505 ATP5J2-PTCD1G3V325 749 aa21.43■■□□□ 1.02
LINC01640-201ENST00000452505 TRIM28Q13263 835 aaKnown RBP21.43■■□□□ 1.02
LINC01640-201ENST00000452505 SYNE4Q8N205 404 aa21.43■■□□□ 1.02
LINC01640-201ENST00000452505 TAF1P21675 1872 aa21.43■■□□□ 1.02
LINC01640-201ENST00000452505 OLFM4Q6UX06 510 aa21.42■■□□□ 1.02
LINC01640-201ENST00000452505 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
LINC01640-201ENST00000452505 SNED1Q8TER0 1413 aa21.42■■□□□ 1.02
LINC01640-201ENST00000452505 STK31Q9BXU1 1019 aa21.42■■□□□ 1.02
LINC01640-201ENST00000452505 NMRK2Q9NPI5 230 aa21.42■■□□□ 1.02
LINC01640-201ENST00000452505 DDX58O95786 925 aaKnown RBP21.41■■□□□ 1.02
LINC01640-201ENST00000452505 HCLS1P14317 486 aaPredicted RBP21.41■■□□□ 1.02
LINC01640-201ENST00000452505 FKBP4Q02790 459 aaKnown RBP eCLIP21.41■■□□□ 1.02
LINC01640-201ENST00000452505 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
LINC01640-201ENST00000452505 GLTPD2A6NH11 291 aa21.39■■□□□ 1.01
LINC01640-201ENST00000452505 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
LINC01640-201ENST00000452505 SPINK5Q9NQ38 1064 aaPredicted RBP21.39■■□□□ 1.01
LINC01640-201ENST00000452505 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
LINC01640-201ENST00000452505 ABCC4O15439 1325 aa21.38■■□□□ 1.01
LINC01640-201ENST00000452505 TCERG1O14776 1098 aaKnown RBP21.38■■□□□ 1.01
LINC01640-201ENST00000452505 PPEF1O14829 653 aaPredicted RBP21.38■■□□□ 1.01
LINC01640-201ENST00000452505 FAM89AQ96GI7 184 aa21.38■■□□□ 1.01
LINC01640-201ENST00000452505 MYD88Q99836 296 aa21.38■■□□□ 1.01
LINC01640-201ENST00000452505 METTL22Q9BUU2 404 aaPredicted RBP21.38■■□□□ 1.01
LINC01640-201ENST00000452505 MYH16Q9H6N6 1097 aa21.38■■□□□ 1.01
LINC01640-201ENST00000452505 ZNF521Q96K83 1311 aa21.37■■□□□ 1.01
LINC01640-201ENST00000452505 VAMP4O75379 141 aa21.37■■□□□ 1.01
LINC01640-201ENST00000452505 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
LINC01640-201ENST00000452505 GRIPAP1Q4V328 841 aa21.37■■□□□ 1.01
LINC01640-201ENST00000452505 PSMD1Q99460 953 aa21.37■■□□□ 1.01
LINC01640-201ENST00000452505 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
LINC01640-201ENST00000452505 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
LINC01640-201ENST00000452505 KSR2Q6VAB6 950 aa21.36■■□□□ 1.01
LINC01640-201ENST00000452505 CCDC191Q8NCU4 936 aa21.36■■□□□ 1.01
LINC01640-201ENST00000452505 RRAGCQ9HB90 399 aa21.36■■□□□ 1.01
LINC01640-201ENST00000452505 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
LINC01640-201ENST00000452505 MAP3K2Q9Y2U5 619 aa21.36■■□□□ 1.01
LINC01640-201ENST00000452505 MYH3P11055 1940 aa21.35■■□□□ 1.01
LINC01640-201ENST00000452505 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
LINC01640-201ENST00000452505 TOMM70O94826 608 aa21.35■■□□□ 1.01
LINC01640-201ENST00000452505 DPY19L2Q6NUT2 758 aa21.35■■□□□ 1.01
LINC01640-201ENST00000452505 DDX46Q7L014 1031 aaKnown RBP21.35■■□□□ 1.01
LINC01640-201ENST00000452505 G2E3Q7L622 706 aa21.35■■□□□ 1.01
LINC01640-201ENST00000452505 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
LINC01640-201ENST00000452505 ZBTB38Q8NAP3 1195 aaPredicted RBP21.35■■□□□ 1.01
LINC01640-201ENST00000452505 BBOX1O75936 387 aa21.34■■□□□ 1.01
LINC01640-201ENST00000452505 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
LINC01640-201ENST00000452505 CWC25Q9NXE8 425 aaPredicted RBP21.34■■□□□ 1.01
LINC01640-201ENST00000452505 ATP6V0A2Q9Y487 856 aa21.34■■□□□ 1.01
LINC01640-201ENST00000452505 LRRC37AA6NMS7 1700 aa21.34■■□□□ 1.01
LINC01640-201ENST00000452505 IRS4O14654 1257 aaPredicted RBP21.33■■□□□ 1.01
LINC01640-201ENST00000452505 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1.01
LINC01640-201ENST00000452505 SF3B3Q15393 1217 aaKnown RBP21.33■■□□□ 1.01
LINC01640-201ENST00000452505 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
LINC01640-201ENST00000452505 FLIIQ13045 1269 aa21.32■■□□□ 1
LINC01640-201ENST00000452505 GRAPQ13588 217 aa21.32■■□□□ 1
LINC01640-201ENST00000452505 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
LINC01640-201ENST00000452505 GRAPLQ8TC17 118 aaPredicted RBP21.32■■□□□ 1
LINC01640-201ENST00000452505 TMX4Q9H1E5 349 aaPredicted RBP21.32■■□□□ 1
LINC01640-201ENST00000452505 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
LINC01640-201ENST00000452505 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
LINC01640-201ENST00000452505 VEGFAP15692 232 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms