RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 CNKSR1Q969H4 720 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 MASTLQ96GX5 879 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-203ENST00000452013 SRGNP10124 158 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 NPR1P16066 1061 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL8A1-203ENST00000452013 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
COL8A1-203ENST00000452013 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
COL8A1-203ENST00000452013 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
COL8A1-203ENST00000452013 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
COL8A1-203ENST00000452013 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-203ENST00000452013 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
COL8A1-203ENST00000452013 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
COL8A1-203ENST00000452013 FAM89AQ96GI7 184 aa11.3□□□□□ -0.6
COL8A1-203ENST00000452013 RBM17Q96I25 401 aaKnown RBP11.3□□□□□ -0.6
COL8A1-203ENST00000452013 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
COL8A1-203ENST00000452013 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
COL8A1-203ENST00000452013 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-203ENST00000452013 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-203ENST00000452013 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-203ENST00000452013 CRY2Q49AN0 593 aa11.29□□□□□ -0.6
COL8A1-203ENST00000452013 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
COL8A1-203ENST00000452013 SSH1Q8WYL5 1049 aa11.29□□□□□ -0.6
COL8A1-203ENST00000452013 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
COL8A1-203ENST00000452013 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-203ENST00000452013 IGKV5-2P06315 115 aa11.28□□□□□ -0.6
COL8A1-203ENST00000452013 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
COL8A1-203ENST00000452013 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
COL8A1-203ENST00000452013 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-203ENST00000452013 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
COL8A1-203ENST00000452013 PTPRCP08575 1304 aa11.28□□□□□ -0.6
COL8A1-203ENST00000452013 ADCY9O60503 1353 aa11.28□□□□□ -0.6
COL8A1-203ENST00000452013 SCN7AQ01118 1682 aa11.27□□□□□ -0.6
COL8A1-203ENST00000452013 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.61
COL8A1-203ENST00000452013 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
COL8A1-203ENST00000452013 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-203ENST00000452013 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.61
COL8A1-203ENST00000452013 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
COL8A1-203ENST00000452013 SYNE4Q8N205 404 aa11.27□□□□□ -0.61
COL8A1-203ENST00000452013 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 F6X3S4 739 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 H7C1W4 665 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 C21orf2O43822 256 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 PDE8AO60658 829 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 BBOX1O75936 387 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 YY1P25490 414 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
COL8A1-203ENST00000452013 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-203ENST00000452013 GCKRQ14397 625 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 CWF19L2Q2TBE0 894 aaKnown RBP11.26□□□□□ -0.61
COL8A1-203ENST00000452013 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 PRPF40BQ6NWY9 871 aaKnown RBP11.26□□□□□ -0.61
COL8A1-203ENST00000452013 SRCIN1Q9C0H9 1055 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-203ENST00000452013 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
COL8A1-203ENST00000452013 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
COL8A1-203ENST00000452013 ALDH1L1O75891 902 aa11.25□□□□□ -0.61
COL8A1-203ENST00000452013 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
COL8A1-203ENST00000452013 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
COL8A1-203ENST00000452013 API5Q9BZZ5 524 aaKnown RBP11.25□□□□□ -0.61
COL8A1-203ENST00000452013 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
COL8A1-203ENST00000452013 CCDC152Q4G0S7 254 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-203ENST00000452013 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-203ENST00000452013 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
COL8A1-203ENST00000452013 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
COL8A1-203ENST00000452013 GRAPQ13588 217 aa11.23□□□□□ -0.61
COL8A1-203ENST00000452013 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-203ENST00000452013 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
COL8A1-203ENST00000452013 GRM8O00222 908 aa11.22□□□□□ -0.61
COL8A1-203ENST00000452013 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-203ENST00000452013 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
COL8A1-203ENST00000452013 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
COL8A1-203ENST00000452013 UBE3BQ7Z3V4 1068 aa11.22□□□□□ -0.61
COL8A1-203ENST00000452013 SP8Q8IXZ3 490 aa11.22□□□□□ -0.61
COL8A1-203ENST00000452013 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
COL8A1-203ENST00000452013 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
COL8A1-203ENST00000452013 ABCC4O15439 1325 aa11.21□□□□□ -0.61
COL8A1-203ENST00000452013 LMNB1P20700 586 aa11.21□□□□□ -0.61
COL8A1-203ENST00000452013 C9orf131Q5VYM1 1079 aa11.21□□□□□ -0.61
COL8A1-203ENST00000452013 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
COL8A1-203ENST00000452013 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
COL8A1-203ENST00000452013 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
COL8A1-203ENST00000452013 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 NFKBIEO00221 500 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 BCAR3O75815 825 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 CASP7P55210 303 aa11.2□□□□□ -0.62
COL8A1-203ENST00000452013 CTSWP56202 376 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms