RNA–Protein interactions for RNA: ENST00000451605.1

ERGIC3-210, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-210ENST00000451605 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
ERGIC3-210ENST00000451605 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
ERGIC3-210ENST00000451605 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
ERGIC3-210ENST00000451605 PLBD2Q8NHP8 589 aa12.55□□□□□ -0.4
ERGIC3-210ENST00000451605 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
ERGIC3-210ENST00000451605 IL16Q14005 1332 aa12.55□□□□□ -0.4
ERGIC3-210ENST00000451605 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
ERGIC3-210ENST00000451605 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-210ENST00000451605 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
ERGIC3-210ENST00000451605 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
ERGIC3-210ENST00000451605 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 SLC10A5Q5PT55 438 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 LAMB2P55268 1798 aa12.53□□□□□ -0.4
ERGIC3-210ENST00000451605 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 CCDC93Q567U6 631 aa12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
ERGIC3-210ENST00000451605 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
ERGIC3-210ENST00000451605 SLC51AQ86UW1 340 aa12.51□□□□□ -0.41
ERGIC3-210ENST00000451605 RPGRQ92834 1020 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-210ENST00000451605 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
ERGIC3-210ENST00000451605 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
ERGIC3-210ENST00000451605 DDX60Q8IY21 1712 aaKnown RBP12.51□□□□□ -0.41
ERGIC3-210ENST00000451605 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 NLRP3Q96P20 1036 aa12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 CRAMP1Q96RY5 1269 aa12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
ERGIC3-210ENST00000451605 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 TRIM28Q13263 835 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 RIC3Q7Z5B4 369 aa12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 RBM17Q96I25 401 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-210ENST00000451605 ABCC4O15439 1325 aa12.48□□□□□ -0.41
ERGIC3-210ENST00000451605 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
ERGIC3-210ENST00000451605 MYD88Q99836 296 aa12.48□□□□□ -0.41
ERGIC3-210ENST00000451605 CHMP4AQ9BY43 222 aa12.48□□□□□ -0.41
ERGIC3-210ENST00000451605 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 G2E3Q7L622 706 aa12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 RTKN2Q8IZC4 609 aa12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
ERGIC3-210ENST00000451605 COL4A1P02462 1669 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 COL4A5P29400 1685 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 VAMP4O75379 141 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 TOMM70O94826 608 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 DDX58O95786 925 aaKnown RBP12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 PSMD1Q99460 953 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 STK31Q9BXU1 1019 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 MAP3K2Q9Y2U5 619 aa12.46□□□□□ -0.41
ERGIC3-210ENST00000451605 TAF1P21675 1872 aa12.46□□□□□ -0.42
ERGIC3-210ENST00000451605 PI4KAP2A4QPH2 592 aa12.45□□□□□ -0.42
ERGIC3-210ENST00000451605 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-210ENST00000451605 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-210ENST00000451605 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-210ENST00000451605 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
ERGIC3-210ENST00000451605 PI4KAP1Q8N8J0 262 aa12.45□□□□□ -0.42
ERGIC3-210ENST00000451605 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 POTECB2RU33 542 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 GRAPQ13588 217 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 ATP6V0A2Q9Y487 856 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 LRRC37AA6NMS7 1700 aa12.44□□□□□ -0.42
ERGIC3-210ENST00000451605 ZNF541Q9H0D2 1346 aa12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 CCER2I3L3R5 266 aa12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 FLIIQ13045 1269 aa12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-210ENST00000451605 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms