RNA–Protein interactions for RNA: ENST00000450882.1

MRPL28-206, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-206ENST00000450882 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
MRPL28-206ENST00000450882 ISCA1Q9BUE6 129 aa20.76■□□□□ 0.91
MRPL28-206ENST00000450882 BCL2L13Q9BXK5 485 aa20.76■□□□□ 0.91
MRPL28-206ENST00000450882 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
MRPL28-206ENST00000450882 PDZRN3Q9UPQ7 1066 aa20.76■□□□□ 0.91
MRPL28-206ENST00000450882 MRPL50Q8N5N7 158 aaKnown RBP20.75■□□□□ 0.91
MRPL28-206ENST00000450882 RNF123Q5XPI4 1314 aa20.75■□□□□ 0.91
MRPL28-206ENST00000450882 TRIM28Q13263 835 aaKnown RBP20.74■□□□□ 0.91
MRPL28-206ENST00000450882 DNAAF4Q8WXU2 420 aa20.74■□□□□ 0.91
MRPL28-206ENST00000450882 KIAA1551Q9HCM1 1747 aa20.74■□□□□ 0.91
MRPL28-206ENST00000450882 PIM2Q9P1W9 311 aa20.74■□□□□ 0.91
MRPL28-206ENST00000450882 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
MRPL28-206ENST00000450882 ANKRD31Q8N7Z5 1873 aa20.73■□□□□ 0.91
MRPL28-206ENST00000450882 ZNF622Q969S3 477 aaKnown RBP eCLIP20.73■□□□□ 0.91
MRPL28-206ENST00000450882 BCS1LQ9Y276 419 aa20.73■□□□□ 0.91
MRPL28-206ENST00000450882 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
MRPL28-206ENST00000450882 CCDC191Q8NCU4 936 aa20.72■□□□□ 0.91
MRPL28-206ENST00000450882 YTHDC1Q96MU7 727 aaKnown RBP20.72■□□□□ 0.91
MRPL28-206ENST00000450882 CWC25Q9NXE8 425 aaPredicted RBP20.72■□□□□ 0.91
MRPL28-206ENST00000450882 KCNA3P22001 575 aa20.71■□□□□ 0.91
MRPL28-206ENST00000450882 DALRD3Q5D0E6 543 aaKnown RBP20.71■□□□□ 0.91
MRPL28-206ENST00000450882 F6X3S4 739 aa20.7■□□□□ 0.9
MRPL28-206ENST00000450882 RARSP54136 660 aaKnown RBP20.7■□□□□ 0.9
MRPL28-206ENST00000450882 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
MRPL28-206ENST00000450882 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
MRPL28-206ENST00000450882 PTPRCP08575 1304 aa20.7■□□□□ 0.9
MRPL28-206ENST00000450882 GRIN3BO60391 1043 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 IGKV5-2P06315 115 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
MRPL28-206ENST00000450882 YBX3P16989 372 aaKnown RBP eCLIP20.69■□□□□ 0.99e-6■□□□□ 10.4
MRPL28-206ENST00000450882 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
MRPL28-206ENST00000450882 SLC4A10Q6U841 1118 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 TTLL6Q8N841 843 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
MRPL28-206ENST00000450882 MASTLQ96GX5 879 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 NLRP3Q96P20 1036 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 RIC1Q4ADV7 1423 aa20.69■□□□□ 0.9
MRPL28-206ENST00000450882 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
MRPL28-206ENST00000450882 SRGNP10124 158 aa20.68■□□□□ 0.9
MRPL28-206ENST00000450882 NPR1P16066 1061 aa20.68■□□□□ 0.9
MRPL28-206ENST00000450882 STYK1Q6J9G0 422 aa20.68■□□□□ 0.9
MRPL28-206ENST00000450882 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
MRPL28-206ENST00000450882 ZBTB38Q8NAP3 1195 aaPredicted RBP20.68■□□□□ 0.9
MRPL28-206ENST00000450882 LINS1Q8NG48 757 aa20.68■□□□□ 0.9
MRPL28-206ENST00000450882 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
MRPL28-206ENST00000450882 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
MRPL28-206ENST00000450882 GOLGB1Q14789 3259 aaKnown RBP20.67■□□□□ 0.9
MRPL28-206ENST00000450882 KLRG2A4D1S0 409 aaPredicted RBP20.67■□□□□ 0.9
MRPL28-206ENST00000450882 PCCAP05165 728 aaPredicted RBP20.67■□□□□ 0.9
MRPL28-206ENST00000450882 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
MRPL28-206ENST00000450882 SLC10A5Q5PT55 438 aa20.67■□□□□ 0.9
MRPL28-206ENST00000450882 CNKSR1Q969H4 720 aa20.67■□□□□ 0.9
MRPL28-206ENST00000450882 TNRC6CQ9HCJ0 1690 aaKnown RBP20.67■□□□□ 0.9
MRPL28-206ENST00000450882 IRS4O14654 1257 aaPredicted RBP20.66■□□□□ 0.9
MRPL28-206ENST00000450882 KIF16BQ96L93 1317 aa20.66■□□□□ 0.9
MRPL28-206ENST00000450882 BRCA1P38398 1863 aaKnown RBP20.66■□□□□ 0.9
MRPL28-206ENST00000450882 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
MRPL28-206ENST00000450882 NOB1Q9ULX3 412 aaKnown RBP20.65■□□□□ 0.9
MRPL28-206ENST00000450882 GCKRQ14397 625 aa20.64■□□□□ 0.89
MRPL28-206ENST00000450882 CRY2Q49AN0 593 aa20.64■□□□□ 0.89
MRPL28-206ENST00000450882 BEND3Q5T5X7 828 aa20.64■□□□□ 0.89
MRPL28-206ENST00000450882 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
MRPL28-206ENST00000450882 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.89
MRPL28-206ENST00000450882 ALDH1B1P30837 517 aa20.63■□□□□ 0.89
MRPL28-206ENST00000450882 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
MRPL28-206ENST00000450882 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
MRPL28-206ENST00000450882 API5Q9BZZ5 524 aaKnown RBP20.63■□□□□ 0.89
MRPL28-206ENST00000450882 ZNF219Q9P2Y4 722 aaPredicted RBP20.63■□□□□ 0.89
MRPL28-206ENST00000450882 PRPF40BQ6NWY9 871 aaKnown RBP20.62■□□□□ 0.89
MRPL28-206ENST00000450882 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
MRPL28-206ENST00000450882 FRAT1Q92837 279 aaPredicted RBP20.62■□□□□ 0.89
MRPL28-206ENST00000450882 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
MRPL28-206ENST00000450882 BCAR3O75815 825 aa20.61■□□□□ 0.89
MRPL28-206ENST00000450882 ALDH1L1O75891 902 aa20.61■□□□□ 0.89
MRPL28-206ENST00000450882 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
MRPL28-206ENST00000450882 ARFGEF1Q9Y6D6 1849 aa20.6■□□□□ 0.89
MRPL28-206ENST00000450882 CDHR2Q9BYE9 1310 aa20.6■□□□□ 0.89
MRPL28-206ENST00000450882 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
MRPL28-206ENST00000450882 C9orf78Q9NZ63 289 aaPredicted RBP20.6■□□□□ 0.89
MRPL28-206ENST00000450882 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
MRPL28-206ENST00000450882 CACNA1SQ13698 1873 aa20.6■□□□□ 0.89
MRPL28-206ENST00000450882 H7C1W4 665 aa20.59■□□□□ 0.89
MRPL28-206ENST00000450882 C21orf2O43822 256 aa20.59■□□□□ 0.89
MRPL28-206ENST00000450882 PDE8AO60658 829 aa20.59■□□□□ 0.89
MRPL28-206ENST00000450882 HOXA10P31260 410 aaPredicted RBP20.59■□□□□ 0.89
MRPL28-206ENST00000450882 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
MRPL28-206ENST00000450882 LAMB2P55268 1798 aa20.59■□□□□ 0.89
MRPL28-206ENST00000450882 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.89
MRPL28-206ENST00000450882 GRM8O00222 908 aa20.57■□□□□ 0.88
MRPL28-206ENST00000450882 SF3B3Q15393 1217 aaKnown RBP20.57■□□□□ 0.88
MRPL28-206ENST00000450882 CCDC152Q4G0S7 254 aa20.57■□□□□ 0.88
MRPL28-206ENST00000450882 SOGA3Q5TF21 947 aa20.57■□□□□ 0.88
MRPL28-206ENST00000450882 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
MRPL28-206ENST00000450882 SLX4Q8IY92 1834 aa20.57■□□□□ 0.88
MRPL28-206ENST00000450882 ABCC4O15439 1325 aa20.56■□□□□ 0.88
MRPL28-206ENST00000450882 UTRNP46939 3433 aa20.56■□□□□ 0.88
MRPL28-206ENST00000450882 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-206ENST00000450882 CCT4P50991 539 aaKnown RBP20.56■□□□□ 0.88
MRPL28-206ENST00000450882 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-206ENST00000450882 CTSWP56202 376 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms