RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 GOLGA2Q08379 1002 aa15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 MASTLQ96GX5 879 aa15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
LSP1P3-201ENST00000449530 KIF3CO14782 793 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 CAPN15O75808 1086 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 RASSF7Q02833 373 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 PRPF40BQ6NWY9 871 aaKnown RBP15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 DNAJC5GQ8N7S2 189 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 ZNF428Q96B54 188 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
LSP1P3-201ENST00000449530 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 C21orf2O43822 256 aa15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 NPR1P16066 1061 aa15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 ZNF521Q96K83 1311 aa15.36■□□□□ 0.05
LSP1P3-201ENST00000449530 KLRG2A4D1S0 409 aaPredicted RBP15.35■□□□□ 0.05
LSP1P3-201ENST00000449530 ATP5J2-PTCD1G3V325 749 aa15.35■□□□□ 0.05
LSP1P3-201ENST00000449530 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
LSP1P3-201ENST00000449530 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
LSP1P3-201ENST00000449530 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
LSP1P3-201ENST00000449530 C9orf131Q5VYM1 1079 aa15.34■□□□□ 0.05
LSP1P3-201ENST00000449530 C3orf67Q6ZVT6 689 aa15.34■□□□□ 0.05
LSP1P3-201ENST00000449530 RPGRQ92834 1020 aaKnown RBP15.34■□□□□ 0.05
LSP1P3-201ENST00000449530 RNF181Q9P0P0 153 aa15.34■□□□□ 0.05
LSP1P3-201ENST00000449530 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
LSP1P3-201ENST00000449530 NFKBIEO00221 500 aa15.33■□□□□ 0.04
LSP1P3-201ENST00000449530 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.04
LSP1P3-201ENST00000449530 COL13A1Q5TAT6 717 aaPredicted RBP15.33■□□□□ 0.04
LSP1P3-201ENST00000449530 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.04
LSP1P3-201ENST00000449530 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
LSP1P3-201ENST00000449530 DICER1Q9UPY3 1922 aaKnown RBP15.33■□□□□ 0.04
LSP1P3-201ENST00000449530 TOMM70O94826 608 aa15.32■□□□□ 0.04
LSP1P3-201ENST00000449530 MIER1Q8N108 512 aa15.32■□□□□ 0.04
LSP1P3-201ENST00000449530 SYNE4Q8N205 404 aa15.32■□□□□ 0.04
LSP1P3-201ENST00000449530 MYD88Q99836 296 aa15.32■□□□□ 0.04
LSP1P3-201ENST00000449530 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
LSP1P3-201ENST00000449530 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
LSP1P3-201ENST00000449530 G2E3Q7L622 706 aa15.31■□□□□ 0.04
LSP1P3-201ENST00000449530 NLRP3Q96P20 1036 aa15.31■□□□□ 0.04
LSP1P3-201ENST00000449530 MAP3K2Q9Y2U5 619 aa15.31■□□□□ 0.04
LSP1P3-201ENST00000449530 TAF1P21675 1872 aa15.31■□□□□ 0.04
LSP1P3-201ENST00000449530 VAMP4O75379 141 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 LMNB1P20700 586 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 ALDH1B1P30837 517 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 PRELPP51888 382 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 OLFM4Q6UX06 510 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 TAOK3Q9H2K8 898 aa15.3■□□□□ 0.04
LSP1P3-201ENST00000449530 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
LSP1P3-201ENST00000449530 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
LSP1P3-201ENST00000449530 TNS4Q8IZW8 715 aa15.29■□□□□ 0.04
LSP1P3-201ENST00000449530 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
LSP1P3-201ENST00000449530 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
LSP1P3-201ENST00000449530 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
LSP1P3-201ENST00000449530 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
LSP1P3-201ENST00000449530 FLIIQ13045 1269 aa15.28■□□□□ 0.04
LSP1P3-201ENST00000449530 KSR2Q6VAB6 950 aa15.28■□□□□ 0.04
LSP1P3-201ENST00000449530 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
LSP1P3-201ENST00000449530 C7orf43Q8WVR3 580 aa15.28■□□□□ 0.04
LSP1P3-201ENST00000449530 MYH3P11055 1940 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 ABCC4O15439 1325 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 LTBP3Q9NS15 1303 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 LRRC37AA6NMS7 1700 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 E9PSI1 815 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 TRIM28Q13263 835 aaKnown RBP15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 SLC51AQ86UW1 340 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 CWC25Q9NXE8 425 aaPredicted RBP15.27■□□□□ 0.04
LSP1P3-201ENST00000449530 COL4A1P02462 1669 aa15.27■□□□□ 0.03
LSP1P3-201ENST00000449530 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
LSP1P3-201ENST00000449530 PCNTO95613 3336 aa15.26■□□□□ 0.03
LSP1P3-201ENST00000449530 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
LSP1P3-201ENST00000449530 NEXNQ0ZGT2 675 aa15.26■□□□□ 0.03
LSP1P3-201ENST00000449530 CCDC191Q8NCU4 936 aa15.26■□□□□ 0.03
LSP1P3-201ENST00000449530 KLRG1Q96E93 195 aa15.26■□□□□ 0.03
LSP1P3-201ENST00000449530 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 DDX46Q7L014 1031 aaKnown RBP15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
LSP1P3-201ENST00000449530 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
LSP1P3-201ENST00000449530 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
LSP1P3-201ENST00000449530 CWF19L2Q2TBE0 894 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms