RNA–Protein interactions for RNA: ENST00000449311.5

CAP1-216, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-216ENST00000449311 MBIPQ9NS73 344 aa22.31■■□□□ 1.16
CAP1-216ENST00000449311 HOXA10P31260 410 aaPredicted RBP22.3■■□□□ 1.16
CAP1-216ENST00000449311 HDGFL1Q5TGJ6 251 aa22.3■■□□□ 1.16
CAP1-216ENST00000449311 C16orf71Q8IYS4 520 aaPredicted RBP22.3■■□□□ 1.16
CAP1-216ENST00000449311 XAGE3Q8WTP9 111 aa22.3■■□□□ 1.16
CAP1-216ENST00000449311 DBF4Q9UBU7 674 aaPredicted RBP22.3■■□□□ 1.16
CAP1-216ENST00000449311 CCDC184Q52MB2 194 aa22.29■■□□□ 1.16
CAP1-216ENST00000449311 SLC10A5Q5PT55 438 aa22.29■■□□□ 1.16
CAP1-216ENST00000449311 DPY19L2Q6NUT2 758 aa22.29■■□□□ 1.16
CAP1-216ENST00000449311 RTKN2Q8IZC4 609 aa22.29■■□□□ 1.16
CAP1-216ENST00000449311 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
CAP1-216ENST00000449311 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
CAP1-216ENST00000449311 DUSP27Q5VZP5 1158 aa22.28■■□□□ 1.16
CAP1-216ENST00000449311 UTP14AQ9BVJ6 771 aaKnown RBP22.28■■□□□ 1.16
CAP1-216ENST00000449311 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
CAP1-216ENST00000449311 TCIRG1Q13488 830 aa22.27■■□□□ 1.16
CAP1-216ENST00000449311 CC2D2BQ6DHV5 1058 aa22.27■■□□□ 1.16
CAP1-216ENST00000449311 HYPKQ9NX55 129 aa22.27■■□□□ 1.16
CAP1-216ENST00000449311 ANP32CO43423 234 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 VEGFAP15692 232 aaPredicted RBP22.26■■□□□ 1.15
CAP1-216ENST00000449311 FSTL1Q12841 308 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 CCDC27Q2M243 656 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 NCBP3Q53F19 620 aaKnown RBP22.26■■□□□ 1.15
CAP1-216ENST00000449311 PLBD2Q8NHP8 589 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 RPGRQ92834 1020 aaKnown RBP22.26■■□□□ 1.15
CAP1-216ENST00000449311 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 CRAMP1Q96RY5 1269 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 SCN4AP35499 1836 aa22.26■■□□□ 1.15
CAP1-216ENST00000449311 SNED1Q8TER0 1413 aa22.25■■□□□ 1.15
CAP1-216ENST00000449311 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
CAP1-216ENST00000449311 NLRP10Q86W26 655 aa22.25■■□□□ 1.15
CAP1-216ENST00000449311 RBM17Q96I25 401 aaKnown RBP22.25■■□□□ 1.15
CAP1-216ENST00000449311 DDX60Q8IY21 1712 aaKnown RBP22.25■■□□□ 1.15
CAP1-216ENST00000449311 ANKRD13DQ6ZTN6 518 aa22.24■■□□□ 1.15
CAP1-216ENST00000449311 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
CAP1-216ENST00000449311 CACNA1FO60840 1977 aa22.23■■□□□ 1.15
CAP1-216ENST00000449311 APLP1P51693 650 aa22.22■■□□□ 1.15
CAP1-216ENST00000449311 PSMD1Q99460 953 aa22.22■■□□□ 1.15
CAP1-216ENST00000449311 MRS2Q9HD23 443 aa22.22■■□□□ 1.15
CAP1-216ENST00000449311 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
CAP1-216ENST00000449311 TAF1P21675 1872 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 POTECB2RU33 542 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 C3orf67Q6ZVT6 689 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 SYNE4Q8N205 404 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 SMC1BQ8NDV3 1235 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 ISCA1Q9BUE6 129 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 TRMT112Q9UI30 125 aaKnown RBP22.2■■□□□ 1.14
CAP1-216ENST00000449311 SH3TC1Q8TE82 1336 aa22.2■■□□□ 1.14
CAP1-216ENST00000449311 WWC1Q8IX03 1113 aa22.19■■□□□ 1.14
CAP1-216ENST00000449311 ZNF277Q9NRM2 450 aaPredicted RBP22.19■■□□□ 1.14
CAP1-216ENST00000449311 PPEF1O14829 653 aaPredicted RBP22.18■■□□□ 1.14
CAP1-216ENST00000449311 IARSP41252 1262 aaKnown RBP22.18■■□□□ 1.14
CAP1-216ENST00000449311 TRIM28Q13263 835 aaKnown RBP22.18■■□□□ 1.14
CAP1-216ENST00000449311 C8orf58Q8NAV2 365 aa22.18■■□□□ 1.14
CAP1-216ENST00000449311 IL16Q14005 1332 aa22.17■■□□□ 1.14
CAP1-216ENST00000449311 ELL2O00472 640 aaPredicted RBP22.17■■□□□ 1.14
CAP1-216ENST00000449311 DDNO94850 711 aaPredicted RBP22.16■■□□□ 1.14
CAP1-216ENST00000449311 CCDC30Q5VVM6 783 aa22.16■■□□□ 1.14
CAP1-216ENST00000449311 LRRC37AA6NMS7 1700 aa22.15■■□□□ 1.14
CAP1-216ENST00000449311 ABCC4O15439 1325 aa22.15■■□□□ 1.14
CAP1-216ENST00000449311 BBOX1O75936 387 aa22.15■■□□□ 1.14
CAP1-216ENST00000449311 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
CAP1-216ENST00000449311 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
CAP1-216ENST00000449311 L3MBTL3Q96JM7 780 aaPredicted RBP22.15■■□□□ 1.14
CAP1-216ENST00000449311 TMX4Q9H1E5 349 aaPredicted RBP22.15■■□□□ 1.14
CAP1-216ENST00000449311 PHAXQ9H814 394 aaKnown RBP22.15■■□□□ 1.14
CAP1-216ENST00000449311 ATP6V0A2Q9Y487 856 aa22.15■■□□□ 1.14
CAP1-216ENST00000449311 FZD9O00144 591 aa22.14■■□□□ 1.13
CAP1-216ENST00000449311 RIC3Q7Z5B4 369 aa22.14■■□□□ 1.13
CAP1-216ENST00000449311 VPS33BQ9H267 617 aa22.14■■□□□ 1.13
CAP1-216ENST00000449311 IQCA1LA6NCM1 817 aa22.13■■□□□ 1.13
CAP1-216ENST00000449311 DDX46Q7L014 1031 aaKnown RBP22.13■■□□□ 1.13
CAP1-216ENST00000449311 JDP2Q8WYK2 163 aa22.13■■□□□ 1.13
CAP1-216ENST00000449311 CEP350Q5VT06 3117 aa22.12■■□□□ 1.13
CAP1-216ENST00000449311 ATP5J2-PTCD1G3V325 749 aa22.12■■□□□ 1.13
CAP1-216ENST00000449311 SP8Q8IXZ3 490 aa22.12■■□□□ 1.13
CAP1-216ENST00000449311 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
CAP1-216ENST00000449311 DDX58O95786 925 aaKnown RBP22.11■■□□□ 1.13
CAP1-216ENST00000449311 GRAPQ13588 217 aa22.11■■□□□ 1.13
CAP1-216ENST00000449311 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
CAP1-216ENST00000449311 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
CAP1-216ENST00000449311 GRAPLQ8TC17 118 aaPredicted RBP22.11■■□□□ 1.13
CAP1-216ENST00000449311 TSR2Q969E8 191 aaKnown RBP22.11■■□□□ 1.13
CAP1-216ENST00000449311 FAM89AQ96GI7 184 aa22.11■■□□□ 1.13
CAP1-216ENST00000449311 COL4A5P29400 1685 aa22.11■■□□□ 1.13
CAP1-216ENST00000449311 ZNF541Q9H0D2 1346 aa22.1■■□□□ 1.13
CAP1-216ENST00000449311 MYH3P11055 1940 aa22.1■■□□□ 1.13
CAP1-216ENST00000449311 TCERG1O14776 1098 aaKnown RBP22.1■■□□□ 1.13
CAP1-216ENST00000449311 WDR63Q8IWG1 891 aa22.1■■□□□ 1.13
CAP1-216ENST00000449311 DNAJC5GQ8N7S2 189 aa22.1■■□□□ 1.13
CAP1-216ENST00000449311 RTFDC1Q9BY42 306 aaPredicted RBP22.1■■□□□ 1.13
CAP1-216ENST00000449311 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
CAP1-216ENST00000449311 GPC2Q8N158 579 aa22.09■■□□□ 1.13
CAP1-216ENST00000449311 CCDC191Q8NCU4 936 aa22.09■■□□□ 1.13
CAP1-216ENST00000449311 SUPT20HQ8NEM7 779 aa22.09■■□□□ 1.13
CAP1-216ENST00000449311 ADAMTSL1Q8N6G6 1762 aa22.09■■□□□ 1.13
CAP1-216ENST00000449311 HSP90B1P14625 803 aaKnown RBP22.08■■□□□ 1.13
CAP1-216ENST00000449311 LARGE2Q8N3Y3 721 aa22.08■■□□□ 1.13
CAP1-216ENST00000449311 ZBTB38Q8NAP3 1195 aaPredicted RBP22.08■■□□□ 1.13
CAP1-216ENST00000449311 METTL22Q9BUU2 404 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms