RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
RTFDC1-204ENST00000449062 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
RTFDC1-204ENST00000449062 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
RTFDC1-204ENST00000449062 LMNB1P20700 586 aa18.2■□□□□ 0.5
RTFDC1-204ENST00000449062 RNF181Q9P0P0 153 aa18.2■□□□□ 0.5
RTFDC1-204ENST00000449062 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
RTFDC1-204ENST00000449062 ALDH1B1P30837 517 aa18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 LTBP3Q9NS15 1303 aa18.19■□□□□ 0.5
RTFDC1-204ENST00000449062 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
RTFDC1-204ENST00000449062 FANCIQ9NVI1 1328 aa18.18■□□□□ 0.5
RTFDC1-204ENST00000449062 SBF1O95248 1867 aa18.18■□□□□ 0.5
RTFDC1-204ENST00000449062 KIF3CO14782 793 aa18.17■□□□□ 0.5
RTFDC1-204ENST00000449062 VAMP4O75379 141 aa18.17■□□□□ 0.5
RTFDC1-204ENST00000449062 C1QTNF8P60827 252 aa18.17■□□□□ 0.5
RTFDC1-204ENST00000449062 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
RTFDC1-204ENST00000449062 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
RTFDC1-204ENST00000449062 ZNF526Q8TF50 670 aaPredicted RBP18.17■□□□□ 0.5
RTFDC1-204ENST00000449062 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
RTFDC1-204ENST00000449062 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
RTFDC1-204ENST00000449062 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
RTFDC1-204ENST00000449062 TRMT112Q9UI30 125 aaKnown RBP18.16■□□□□ 0.5
RTFDC1-204ENST00000449062 CCER2I3L3R5 266 aa18.15■□□□□ 0.5
RTFDC1-204ENST00000449062 HCLS1P14317 486 aaPredicted RBP18.15■□□□□ 0.5
RTFDC1-204ENST00000449062 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
RTFDC1-204ENST00000449062 SNED1Q8TER0 1413 aa18.15■□□□□ 0.5
RTFDC1-204ENST00000449062 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
RTFDC1-204ENST00000449062 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
RTFDC1-204ENST00000449062 G2E3Q7L622 706 aa18.14■□□□□ 0.49
RTFDC1-204ENST00000449062 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
RTFDC1-204ENST00000449062 SH3TC1Q8TE82 1336 aa18.14■□□□□ 0.49
RTFDC1-204ENST00000449062 ZC3H4Q9UPT8 1303 aaKnown RBP18.14■□□□□ 0.49
RTFDC1-204ENST00000449062 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 FAM89AQ96GI7 184 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 RBM17Q96I25 401 aaKnown RBP18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 TAOK3Q9H2K8 898 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
RTFDC1-204ENST00000449062 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
RTFDC1-204ENST00000449062 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
RTFDC1-204ENST00000449062 SLC51AQ86UW1 340 aa18.12■□□□□ 0.49
RTFDC1-204ENST00000449062 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
RTFDC1-204ENST00000449062 RPGRQ92834 1020 aaKnown RBP18.12■□□□□ 0.49
RTFDC1-204ENST00000449062 PI4KAP2A4QPH2 592 aa18.11■□□□□ 0.49
RTFDC1-204ENST00000449062 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
RTFDC1-204ENST00000449062 SF3B3Q15393 1217 aaKnown RBP18.11■□□□□ 0.49
RTFDC1-204ENST00000449062 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
RTFDC1-204ENST00000449062 PI4KAP1Q8N8J0 262 aa18.11■□□□□ 0.49
RTFDC1-204ENST00000449062 ARFGEF2Q9Y6D5 1785 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 GLTPD2A6NH11 291 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 MYD88Q99836 296 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
RTFDC1-204ENST00000449062 BBOX1O75936 387 aa18.09■□□□□ 0.49
RTFDC1-204ENST00000449062 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
RTFDC1-204ENST00000449062 ZBTB38Q8NAP3 1195 aaPredicted RBP18.09■□□□□ 0.49
RTFDC1-204ENST00000449062 PSMD1Q99460 953 aa18.09■□□□□ 0.49
RTFDC1-204ENST00000449062 MYH16Q9H6N6 1097 aa18.09■□□□□ 0.49
RTFDC1-204ENST00000449062 ANKRD36CQ5JPF3 1778 aa18.09■□□□□ 0.49
RTFDC1-204ENST00000449062 ABCC4O15439 1325 aa18.08■□□□□ 0.49
RTFDC1-204ENST00000449062 KDM2BQ8NHM5 1336 aa18.08■□□□□ 0.49
RTFDC1-204ENST00000449062 POTECB2RU33 542 aa18.08■□□□□ 0.48
RTFDC1-204ENST00000449062 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
RTFDC1-204ENST00000449062 ZNF277Q9NRM2 450 aaPredicted RBP18.08■□□□□ 0.48
RTFDC1-204ENST00000449062 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
RTFDC1-204ENST00000449062 IRS4O14654 1257 aaPredicted RBP18.07■□□□□ 0.48
RTFDC1-204ENST00000449062 FLIIQ13045 1269 aa18.07■□□□□ 0.48
RTFDC1-204ENST00000449062 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
RTFDC1-204ENST00000449062 RRAGCQ9HB90 399 aa18.07■□□□□ 0.48
RTFDC1-204ENST00000449062 PPEF1O14829 653 aaPredicted RBP18.06■□□□□ 0.48
RTFDC1-204ENST00000449062 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
RTFDC1-204ENST00000449062 SP8Q8IXZ3 490 aa18.06■□□□□ 0.48
RTFDC1-204ENST00000449062 CWC25Q9NXE8 425 aaPredicted RBP18.06■□□□□ 0.48
RTFDC1-204ENST00000449062 TOMM70O94826 608 aa18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 SLFN5Q08AF3 891 aa18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 GRAPQ13588 217 aa18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 JARID2Q92833 1246 aaPredicted RBP18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 CCDC88AQ3V6T2 1871 aa18.05■□□□□ 0.48
RTFDC1-204ENST00000449062 IARSP41252 1262 aaKnown RBP18.04■□□□□ 0.48
RTFDC1-204ENST00000449062 DPY19L2Q6NUT2 758 aa18.04■□□□□ 0.48
RTFDC1-204ENST00000449062 RTFDC1Q9BY42 306 aaPredicted RBP18.04■□□□□ 0.48
RTFDC1-204ENST00000449062 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
RTFDC1-204ENST00000449062 H7C1W4 665 aa18.03■□□□□ 0.48
RTFDC1-204ENST00000449062 FZD9O00144 591 aa18.03■□□□□ 0.48
RTFDC1-204ENST00000449062 CELF1Q92879 486 aaKnown RBP18.03■□□□□ 0.48
RTFDC1-204ENST00000449062 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
RTFDC1-204ENST00000449062 DICER1Q9UPY3 1922 aaKnown RBP18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 CEP350Q5VT06 3117 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms