RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 NOP2P46087 812 aaKnown RBP7.08□□□□□ -1.28
PCDH15-219ENST00000448885 ST5P78524 1137 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 CTAGE1Q96RT6 745 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 SAMM50Q9Y512 469 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 EFCAB5A4FU69 1503 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 ABCC11Q96J66 1382 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 MXRA7P84157 204 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 BOLA2Q9H3K6 86 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 ADAMTS12P58397 1594 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 KIF4AO95239 1232 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 SNW1Q13573 536 aaKnown RBP7.07□□□□□ -1.28
PCDH15-219ENST00000448885 GRIN2BQ13224 1484 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 STX6O43752 255 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 CBX1P83916 185 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 OTUD6BQ8N6M0 293 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 SELENOOQ9BVL4 669 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 JADE2Q9NQC1 790 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 LRPPRCP42704 1394 aaKnown RBP7.07□□□□□ -1.28
PCDH15-219ENST00000448885 CUL7Q14999 1698 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 NOL3O60936 208 aaKnown RBP7.07□□□□□ -1.28
PCDH15-219ENST00000448885 KRT13P13646 458 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 GJB2P29033 226 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 TMEM67Q5HYA8 995 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 FERMT3Q86UX7 667 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 TIGD1Q96MW7 591 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 SLC12A5Q9H2X9 1139 aa7.07□□□□□ -1.28
PCDH15-219ENST00000448885 PRG4Q92954 1404 aaPredicted RBP7.07□□□□□ -1.28
PCDH15-219ENST00000448885 NDC80O14777 642 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 SMARCA5O60264 1052 aaPredicted RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 SLU7O95391 586 aaKnown RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 TRAF1Q13077 416 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 TAF7Q15545 349 aaPredicted RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC141Q6ZP82 1450 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 GUCY1B3Q02153 619 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 UVSSAQ2YD98 709 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 RUSC2Q8N2Y8 1516 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 HSPA4P34932 840 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 METAP2P50579 478 aaKnown RBP eCLIP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 MSL1Q68DK7 614 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 CDC5LQ99459 802 aaKnown RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 MFSD6Q6ZSS7 791 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 TTC14Q96N46 770 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 TEX13AQ9BXU3 409 aaPredicted RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 CRNKL1Q9BZJ0 848 aaKnown RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 PTPRCP08575 1304 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 FBF1Q8TES7 1133 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC77Q9BR77 488 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 HMG20BQ9P0W2 317 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 EXOC6BQ9Y2D4 811 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 PAXBP1Q9Y5B6 917 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC171Q6TFL3 1326 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 IGF1RP08069 1367 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 BMP15O95972 392 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 IARSP41252 1262 aaKnown RBP7.06□□□□□ -1.28
PCDH15-219ENST00000448885 NCOA7Q8NI08 942 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 LMBR1Q8WVP7 490 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 MMRN2Q9H8L6 949 aa7.06□□□□□ -1.28
PCDH15-219ENST00000448885 FAM135AQ9P2D6 1515 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 TMPOP42166 694 aaKnown RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 TRIM47Q96LD4 638 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 LRRIQ1Q96JM4 1722 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 SLFN5Q08AF3 891 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC129Q6ZRS4 1044 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 PPP1R42Q7Z4L9 355 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 IL27Q8NEV9 243 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 NAP1L3Q99457 506 aaPredicted RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 EPRSP07814 1512 aaKnown RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 TOPBP1Q92547 1522 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 TSPY2A6NKD2 308 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 MCM5P33992 734 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 ARL1P40616 181 aaPredicted RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 DNAAF4Q8WXU2 420 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 NUDT16Q96DE0 195 aaKnown RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 KRT23Q9C075 422 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 UQCRFS1P1P0C7P4 283 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 CYLC1P35663 651 aaPredicted RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC6Q16204 474 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 RRAGBQ5VZM2 374 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 OPA1O60313 960 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 PHACTR2O75167 634 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 MAP7D1Q3KQU3 841 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 APBB1IPQ7Z5R6 666 aaPredicted RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 KIAA1524Q8TCG1 905 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 TRMT1Q9NXH9 659 aaKnown RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 HDAC9Q9UKV0 1011 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 ODF2LQ9ULJ1 636 aa7.05□□□□□ -1.28
PCDH15-219ENST00000448885 NKTRP30414 1462 aaKnown RBP7.05□□□□□ -1.28
PCDH15-219ENST00000448885 ATP2A1O14983 1001 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 GTF2F1P35269 517 aaKnown RBP eCLIP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 XPCQ01831 940 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 SMC6Q96SB8 1091 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 AQRO60306 1485 aaKnown RBP eCLIP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CAVIN2O95810 425 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 IDEP14735 1019 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CCT2P78371 535 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC102BQ68D86 513 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms