RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 CDC5LQ99459 802 aaKnown RBP9.48□□□□□ -0.89
LPP-208ENST00000448637 DDX19AQ9NUU7 478 aaKnown RBP9.48□□□□□ -0.89
LPP-208ENST00000448637 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
LPP-208ENST00000448637 TRMT112Q9UI30 125 aaKnown RBP9.48□□□□□ -0.89
LPP-208ENST00000448637 PRDM10Q9NQV6 1147 aa9.48□□□□□ -0.89
LPP-208ENST00000448637 FAM114A2Q9NRY5 505 aa9.48□□□□□ -0.89
LPP-208ENST00000448637 AKR1B10O60218 316 aa9.47□□□□□ -0.89
LPP-208ENST00000448637 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
LPP-208ENST00000448637 BMP15O95972 392 aa9.47□□□□□ -0.89
LPP-208ENST00000448637 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
LPP-208ENST00000448637 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
LPP-208ENST00000448637 RTEL1-TNFRSF6BF6WH68 1400 aa9.47□□□□□ -0.89
LPP-208ENST00000448637 CYLC1P35663 651 aaPredicted RBP9.47□□□□□ -0.89
LPP-208ENST00000448637 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
LPP-208ENST00000448637 CACYBPQ9HB71 228 aaKnown RBP9.47□□□□□ -0.89
LPP-208ENST00000448637 TSPY2A6NKD2 308 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 C11orf95C9JLR9 678 aaPredicted RBP9.46□□□□□ -0.89
LPP-208ENST00000448637 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.89
LPP-208ENST00000448637 BIRC2Q13490 618 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 STX1AQ16623 288 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 GSTA5Q7RTV2 222 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 ANKS4BQ8N8V4 417 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 TSR2Q969E8 191 aaKnown RBP9.46□□□□□ -0.89
LPP-208ENST00000448637 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.89
LPP-208ENST00000448637 CFAP157Q5JU67 520 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 FERMT3Q86UX7 667 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 CEP83Q9Y592 693 aa9.46□□□□□ -0.89
LPP-208ENST00000448637 MX1P20591 662 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 TRMT1LQ7Z2T5 733 aaKnown RBP9.46□□□□□ -0.9
LPP-208ENST00000448637 GABPB2Q8TAK5 448 aaPredicted RBP9.46□□□□□ -0.9
LPP-208ENST00000448637 FSIP1Q8NA03 581 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 TEX13AQ9BXU3 409 aaPredicted RBP9.46□□□□□ -0.9
LPP-208ENST00000448637 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
LPP-208ENST00000448637 SYCE3A1L190 88 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 CNGA1P29973 690 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 IPO4Q8TEX9 1081 aaKnown RBP9.46□□□□□ -0.9
LPP-208ENST00000448637 VAT1LQ9HCJ6 419 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 PFDN4Q9NQP4 134 aa9.46□□□□□ -0.9
LPP-208ENST00000448637 NOC2LQ9Y3T9 749 aaKnown RBP9.46□□□□□ -0.9
LPP-208ENST00000448637 ZBTB24O43167 697 aaPredicted RBP9.45□□□□□ -0.9
LPP-208ENST00000448637 ST5P78524 1137 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 MSL1Q68DK7 614 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 MYD88Q99836 296 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 POGZQ7Z3K3 1410 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 OPA1O60313 960 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 CRCPO75575 148 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 CAVIN2O95810 425 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
LPP-208ENST00000448637 JAKMIP2Q96AA8 810 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 NCAPGQ9BPX3 1015 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 CRNKL1Q9BZJ0 848 aaKnown RBP9.45□□□□□ -0.9
LPP-208ENST00000448637 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 STIM2Q9P246 746 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 KIF3CO14782 793 aa9.45□□□□□ -0.9
LPP-208ENST00000448637 RAB3IPQ96QF0 476 aaPredicted RBP9.45□□□□□ -0.9
LPP-208ENST00000448637 FAM13AO94988 1023 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 SATB1Q01826 763 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 SPAG1Q07617 926 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 TMEM67Q5HYA8 995 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 TMC6Q7Z403 805 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 CCDC89Q8N998 374 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 WDR66Q8TBY9 1149 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.44□□□□□ -0.9
LPP-208ENST00000448637 HAUS7Q99871 368 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 USP25Q9UHP3 1055 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 FCHSD2O94868 740 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 EEF2P13639 858 aaKnown RBP9.44□□□□□ -0.9
LPP-208ENST00000448637 BOLA2Q9H3K6 86 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 ERCC6LQ2NKX8 1250 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 PPP1R42Q7Z4L9 355 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
LPP-208ENST00000448637 N4BP3O15049 544 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 MFSD6Q6ZSS7 791 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 PRIMPOLQ96LW4 560 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 TRIM7Q9C029 511 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 PTCD1O75127 700 aaKnown RBP9.44□□□□□ -0.9
LPP-208ENST00000448637 GNAQP50148 359 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 MNAT1P51948 309 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 PLCB3Q01970 1234 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 MAP7Q14244 749 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 ZGPATQ8N5A5 531 aaKnown RBP9.44□□□□□ -0.9
LPP-208ENST00000448637 ZNF622Q969S3 477 aaKnown RBP eCLIP9.44□□□□□ -0.9
LPP-208ENST00000448637 C6orf50Q9HD87 102 aa9.44□□□□□ -0.9
LPP-208ENST00000448637 SNW1Q13573 536 aaKnown RBP9.43□□□□□ -0.9
LPP-208ENST00000448637 GPATCH11Q8N954 259 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 ZHX1Q9UKY1 873 aaPredicted RBP9.43□□□□□ -0.9
LPP-208ENST00000448637 CCDC129Q6ZRS4 1044 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 FEZ2Q9UHY8 353 aaPredicted RBP9.43□□□□□ -0.9
LPP-208ENST00000448637 FAM184BQ9ULE4 1060 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms