RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 PTPN12Q05209 780 aaKnown RBP20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 RABL6Q3YEC7 729 aaPredicted RBP20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 KIAA1211Q6ZU35 1233 aa20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 COPRSQ9NQ92 184 aa20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 PAPPAQ13219 1627 aa20.67■□□□□ 0.9
CDKN1A-204ENST00000448526 A1BGP04217 495 aa20.67■□□□□ 0.9
CDKN1A-204ENST00000448526 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
CDKN1A-204ENST00000448526 LMBRD1Q9NUN5 540 aa20.67■□□□□ 0.9
CDKN1A-204ENST00000448526 GAS2L3Q86XJ1 694 aa20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 TTC14Q96N46 770 aa20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 BOLA2Q9H3K6 86 aa20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 COL15A1P39059 1388 aa20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 FOXD4L5Q5VV16 416 aaPredicted RBP20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 RUFY2Q8WXA3 655 aa20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 FOXD4L4Q8WXT5 416 aaPredicted RBP20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 INTS4Q96HW7 963 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 FAM227BQ96M60 508 aa20.66■□□□□ 0.9
CDKN1A-204ENST00000448526 NUP188Q5SRE5 1749 aa20.65■□□□□ 0.9
CDKN1A-204ENST00000448526 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
CDKN1A-204ENST00000448526 KLHL40Q2TBA0 621 aa20.65■□□□□ 0.9
CDKN1A-204ENST00000448526 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
CDKN1A-204ENST00000448526 CPA1P15085 419 aa20.64■□□□□ 0.89
CDKN1A-204ENST00000448526 NMIQ13287 307 aaPredicted RBP20.64■□□□□ 0.89
CDKN1A-204ENST00000448526 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.89
CDKN1A-204ENST00000448526 TFCP2Q12800 502 aa20.63■□□□□ 0.89
CDKN1A-204ENST00000448526 NHSL1Q5SYE7 1610 aa20.63■□□□□ 0.89
CDKN1A-204ENST00000448526 BRD1O95696 1058 aa20.63■□□□□ 0.89
CDKN1A-204ENST00000448526 EVA1CP58658 441 aa20.63■□□□□ 0.89
CDKN1A-204ENST00000448526 H7C1W4 665 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 MRE11P49959 708 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 AK2P54819 239 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 FOXO4P98177 505 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 PRPF40BQ6NWY9 871 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 LARP6Q9BRS8 491 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 GRPEL1Q9HAV7 217 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 TNS2Q63HR2 1409 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 CCDC171Q6TFL3 1326 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 TJP1Q07157 1748 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 TNNI3KQ59H18 835 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 LMBR1LQ6UX01 489 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 KCNB2Q92953 911 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 EDC3Q96F86 508 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 FPGT-TNNI3KV9GXZ4 949 aa20.62■□□□□ 0.89
CDKN1A-204ENST00000448526 A0A0D9SFI3 127 aa20.61■□□□□ 0.89
CDKN1A-204ENST00000448526 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
CDKN1A-204ENST00000448526 CASTP20810 708 aaKnown RBP20.6■□□□□ 0.89
CDKN1A-204ENST00000448526 NECTIN1Q15223 517 aa20.6■□□□□ 0.89
CDKN1A-204ENST00000448526 PRPF40AO75400 957 aaKnown RBP20.6■□□□□ 0.89
CDKN1A-204ENST00000448526 FSD1Q9BTV5 496 aa20.6■□□□□ 0.89
CDKN1A-204ENST00000448526 ZBTB3Q9H5J0 574 aa20.6■□□□□ 0.89
CDKN1A-204ENST00000448526 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
CDKN1A-204ENST00000448526 HIP1O00291 1037 aa20.59■□□□□ 0.89
CDKN1A-204ENST00000448526 CWC25Q9NXE8 425 aaPredicted RBP20.59■□□□□ 0.89
CDKN1A-204ENST00000448526 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
CDKN1A-204ENST00000448526 RBM8AQ9Y5S9 174 aaKnown RBP20.59■□□□□ 0.89
CDKN1A-204ENST00000448526 ATP5JP18859 108 aa20.58■□□□□ 0.89
CDKN1A-204ENST00000448526 MAP4K1Q92918 833 aa20.58■□□□□ 0.89
CDKN1A-204ENST00000448526 JAKMIP1Q96N16 626 aaKnown RBP20.58■□□□□ 0.89
CDKN1A-204ENST00000448526 NDUFB9Q9Y6M9 179 aa20.58■□□□□ 0.89
CDKN1A-204ENST00000448526 GPT2Q8TD30 523 aa20.57■□□□□ 0.88
CDKN1A-204ENST00000448526 DBNDD2Q9BQY9 259 aa20.57■□□□□ 0.88
CDKN1A-204ENST00000448526 LARGE1O95461 756 aa20.57■□□□□ 0.88
CDKN1A-204ENST00000448526 COL9A3Q14050 684 aaPredicted RBP20.57■□□□□ 0.88
CDKN1A-204ENST00000448526 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
CDKN1A-204ENST00000448526 MED23Q9ULK4 1368 aa20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 ZSWIM6Q9HCJ5 1215 aa20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 RPAP1Q9BWH6 1393 aaPredicted RBP20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 NCLP19338 710 aaKnown RBP20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 CAVIN1Q6NZI2 390 aaKnown RBP20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 TM6SF1Q9BZW5 370 aa20.56■□□□□ 0.88
CDKN1A-204ENST00000448526 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
CDKN1A-204ENST00000448526 ASAP1Q9ULH1 1129 aa20.55■□□□□ 0.88
CDKN1A-204ENST00000448526 CHGBP05060 677 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 SLC27A2O14975 620 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 PIGBQ92521 554 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 PDRG1Q9NUG6 133 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 TAF6LQ9Y6J9 622 aa20.54■□□□□ 0.88
CDKN1A-204ENST00000448526 VPS53Q5VIR6 699 aa20.53■□□□□ 0.88
CDKN1A-204ENST00000448526 KCNJ4P48050 445 aa20.53■□□□□ 0.88
CDKN1A-204ENST00000448526 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
CDKN1A-204ENST00000448526 CYP46A1Q9Y6A2 500 aa20.53■□□□□ 0.88
CDKN1A-204ENST00000448526 JCADQ9P266 1359 aa20.52■□□□□ 0.88
CDKN1A-204ENST00000448526 DTNBO60941 627 aa20.52■□□□□ 0.88
CDKN1A-204ENST00000448526 ZSCAN23Q3MJ62 389 aa20.52■□□□□ 0.88
CDKN1A-204ENST00000448526 ZNF594Q96JF6 807 aaPredicted RBP20.52■□□□□ 0.88
CDKN1A-204ENST00000448526 ITGB4P16144 1822 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 DNAJC10Q8IXB1 793 aa20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
CDKN1A-204ENST00000448526 HAUS7Q99871 368 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms