RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
CHRD-205ENST00000448472 DNAJC2Q99543 621 aaKnown RBP18.71■□□□□ 0.59
CHRD-205ENST00000448472 SPTLC3Q9NUV7 552 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 ARHGEF10O15013 1369 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 ZSWIM6Q9HCJ5 1215 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 A0A087WWV3 80 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
CHRD-205ENST00000448472 HOXC9P31274 260 aa18.7■□□□□ 0.58
CHRD-205ENST00000448472 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
CHRD-205ENST00000448472 JAK2O60674 1132 aa18.7■□□□□ 0.58
CHRD-205ENST00000448472 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
CHRD-205ENST00000448472 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
CHRD-205ENST00000448472 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
CHRD-205ENST00000448472 NR1I2O75469 434 aa18.7■□□□□ 0.58
CHRD-205ENST00000448472 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
CHRD-205ENST00000448472 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
CHRD-205ENST00000448472 TTC41PQ6P2S7 1318 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 SLC27A2O14975 620 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 CEBPAP49715 358 aaPredicted RBP18.69■□□□□ 0.58
CHRD-205ENST00000448472 DMTNQ08495 405 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 POLA2Q14181 598 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
CHRD-205ENST00000448472 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
CHRD-205ENST00000448472 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 FUCA2Q9BTY2 467 aa18.69■□□□□ 0.58
CHRD-205ENST00000448472 USP6P35125 1406 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 RIC3Q7Z5B4 369 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 ERCC4Q92889 916 aaPredicted RBP18.68■□□□□ 0.58
CHRD-205ENST00000448472 A0A0D9SFI3 127 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 MYL6BP14649 208 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 ANKRD1Q15327 319 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 BRF1Q92994 677 aa18.68■□□□□ 0.58
CHRD-205ENST00000448472 DDX19AQ9NUU7 478 aaKnown RBP18.68■□□□□ 0.58
CHRD-205ENST00000448472 LEO1Q8WVC0 666 aaPredicted RBP18.67■□□□□ 0.58
CHRD-205ENST00000448472 EPB41L2O43491 1005 aaKnown RBP18.67■□□□□ 0.58
CHRD-205ENST00000448472 TAF6LQ9Y6J9 622 aa18.67■□□□□ 0.58
CHRD-205ENST00000448472 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
CHRD-205ENST00000448472 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
CHRD-205ENST00000448472 EAF2Q96CJ1 260 aaPredicted RBP18.66■□□□□ 0.58
CHRD-205ENST00000448472 ZNF75DP51815 510 aa18.66■□□□□ 0.58
CHRD-205ENST00000448472 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
CHRD-205ENST00000448472 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
CHRD-205ENST00000448472 LTKP29376 864 aa18.66■□□□□ 0.58
CHRD-205ENST00000448472 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
CHRD-205ENST00000448472 NECTIN1Q15223 517 aa18.66■□□□□ 0.58
CHRD-205ENST00000448472 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
CHRD-205ENST00000448472 DBF4Q9UBU7 674 aaPredicted RBP18.66■□□□□ 0.58
CHRD-205ENST00000448472 HIP1O00291 1037 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHRD-205ENST00000448472 DLC1Q96QB1 1528 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 TTC21AQ8NDW8 1320 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 CCT2P78371 535 aaKnown RBP18.65■□□□□ 0.58
CHRD-205ENST00000448472 ST3GAL1Q11201 340 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 ARID5BQ14865 1188 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 PROSER3Q2NL68 480 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 ME1P48163 572 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 CEP135Q66GS9 1140 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 CACTINQ8WUQ7 758 aaKnown RBP18.65■□□□□ 0.58
CHRD-205ENST00000448472 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
CHRD-205ENST00000448472 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.57
CHRD-205ENST00000448472 CHMP4AQ9BY43 222 aa18.64■□□□□ 0.57
CHRD-205ENST00000448472 TM6SF1Q9BZW5 370 aa18.64■□□□□ 0.57
CHRD-205ENST00000448472 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
CHRD-205ENST00000448472 PRAMEF22A3QJZ6 481 aa18.64■□□□□ 0.57
CHRD-205ENST00000448472 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
CHRD-205ENST00000448472 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.57
CHRD-205ENST00000448472 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.57
CHRD-205ENST00000448472 BICC1Q9H694 974 aaKnown RBP18.64■□□□□ 0.57
CHRD-205ENST00000448472 PTPN14Q15678 1187 aa18.63■□□□□ 0.57
CHRD-205ENST00000448472 RPS6KB1P23443 525 aa18.63■□□□□ 0.57
CHRD-205ENST00000448472 FTOQ9C0B1 505 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHRD-205ENST00000448472 OVOS2A0A0J9YW53 1432 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 OVOS2Q6IE36 1432 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 SKILP12757 684 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 Q6ZUG5 572 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 ZNF589Q86UQ0 364 aaPredicted RBP18.62■□□□□ 0.57
CHRD-205ENST00000448472 CLSTN2Q9H4D0 955 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
CHRD-205ENST00000448472 GORABQ5T7V8 394 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
CHRD-205ENST00000448472 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
CHRD-205ENST00000448472 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 CCAR1Q8IX12 1150 aaKnown RBP18.62■□□□□ 0.57
CHRD-205ENST00000448472 NEUROD6Q96NK8 337 aa18.62■□□□□ 0.57
CHRD-205ENST00000448472 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
CHRD-205ENST00000448472 NEK1Q96PY6 1258 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 CFAP45Q9UL16 551 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms