RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 DNAI1Q9UI46 699 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 A0A087WZG4 1122 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
NEDD9-204ENST00000448183 IDEP14735 1019 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 SYKP43405 635 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 MNAT1P51948 309 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CCDC40Q4G0X9 1142 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 ANO6Q4KMQ2 910 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 PPP1R42Q7Z4L9 355 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CEP112Q8N8E3 955 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 NSD2O96028 1365 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 MACROD2A1Z1Q3 448 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 AKR1B10O60218 316 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CETN1Q12798 172 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 ISM2Q6H9L7 571 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 ZNF444Q8N0Y2 327 aaPredicted RBP8.94□□□□□ -0.98
NEDD9-204ENST00000448183 SRRTQ9BXP5 876 aaKnown RBP8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CTAGE15A4D2H0 777 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 IVLP07476 585 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CTAGE8P0CG41 777 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 SLC5A1P13866 664 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 UBE4AQ14139 1066 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CTAGE6Q86UF2 777 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 USP48Q86UV5 1035 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CTAGE4Q8IX94 777 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 CALML4Q96GE6 196 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
NEDD9-204ENST00000448183 GOLIM4O00461 696 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 SLU7O95391 586 aaKnown RBP8.93□□□□□ -0.98
NEDD9-204ENST00000448183 NOP2P46087 812 aaKnown RBP8.93□□□□□ -0.98
NEDD9-204ENST00000448183 METAP2P50579 478 aaKnown RBP eCLIP8.93□□□□□ -0.98
NEDD9-204ENST00000448183 TMEM67Q5HYA8 995 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 CNPY2Q9Y2B0 182 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 LIG1P18858 919 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 TSHZ3Q63HK5 1081 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 MICU3Q86XE3 530 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 GPATCH11Q8N954 259 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 NCOA7Q8NI08 942 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 KCNG4Q8TDN1 519 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 BRF1Q92994 677 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 TMOD2Q9NZR1 351 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 HSF2BPO75031 334 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 STAMBPO95630 424 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 SPAG1Q07617 926 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 TTC12Q9H892 705 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-204ENST00000448183 MBIPQ9NS73 344 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 DACT1Q9NYF0 836 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 TCERG1LQ5VWI1 586 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 DZIP1Q86YF9 867 aaKnown RBP8.93□□□□□ -0.98
NEDD9-204ENST00000448183 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 MRPS27Q92552 414 aaKnown RBP8.93□□□□□ -0.98
NEDD9-204ENST00000448183 ZNF652Q9Y2D9 606 aa8.93□□□□□ -0.98
NEDD9-204ENST00000448183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.93□□□□□ -0.982e-8■■□□□ 11.9
NEDD9-204ENST00000448183 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 FSD2A1L4K1 749 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 TRIM21P19474 475 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 CYLC1P35663 651 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 PRPF4BQ13523 1007 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 TTF1Q15361 905 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 C8orf34Q49A92 452 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 NECAB1Q8N987 351 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 CTAGE1Q96RT6 745 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 KIF5BP33176 963 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 NF2P35240 595 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 MCM6Q14566 821 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 BICDL1Q6ZP65 573 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 PIK3R4Q99570 1358 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 EPRSP07814 1512 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 ANKRD18BA2A2Z9 1011 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 RBM25P49756 843 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 PDE1AP54750 535 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 IFI16Q16666 785 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 TRIM47Q96LD4 638 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 ESYT1Q9BSJ8 1104 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 RMND1Q9NWS8 449 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 THOC2Q8NI27 1593 aaKnown RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 MYO1BO43795 1136 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 BMP15O95972 392 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 F13A1P00488 732 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 HAND2P61296 217 aa8.92□□□□□ -0.98
NEDD9-204ENST00000448183 CRACR2BQ8N4Y2 399 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-204ENST00000448183 HSPA4P34932 840 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 SLC26A6Q9BXS9 759 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 RNF216Q9NWF9 866 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-204ENST00000448183 CTNNA2P26232 953 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 CCDC96Q2M329 555 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 SMC5Q8IY18 1101 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 ANKRD44Q8N8A2 993 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 DNAJC25Q9H1X3 360 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 RPRD2Q5VT52 1461 aaKnown RBP8.91□□□□□ -0.98
NEDD9-204ENST00000448183 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 PI4KAP2A4QPH2 592 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 CCDC144CPQ8IYA2 1237 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 USHBP1Q8N6Y0 703 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms