RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TLR7Q9NYK1 1049 aaKnown RBP15.42■□□□□ 0.06
SHC1-210ENST00000448116 COL9A3Q14050 684 aaPredicted RBP15.41■□□□□ 0.06
SHC1-210ENST00000448116 VPS53Q5VIR6 699 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 CREB3L3Q68CJ9 461 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 FAM184AQ8NB25 1140 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 GRM8O00222 908 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
SHC1-210ENST00000448116 KCNH5Q8NCM2 988 aa15.41■□□□□ 0.06
SHC1-210ENST00000448116 ZSCAN31Q96LW9 406 aaPredicted RBP15.41■□□□□ 0.06
SHC1-210ENST00000448116 TCHHQ07283 1943 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 SASH1O94885 1247 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
SHC1-210ENST00000448116 ZSWIM6Q9HCJ5 1215 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 TPCN1Q9ULQ1 816 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
SHC1-210ENST00000448116 GCP02774 474 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
SHC1-210ENST00000448116 ANKARQ7Z5J8 1434 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 AMOTQ4VCS5 1084 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 TMEM87AQ8NBN3 555 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 ORAI2Q96SN7 254 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 PDCL3Q9H2J4 239 aa15.4■□□□□ 0.06
SHC1-210ENST00000448116 SH2B1Q9NRF2 756 aaPredicted RBP15.4■□□□□ 0.06
SHC1-210ENST00000448116 LETM1O95202 739 aaPredicted RBP15.39■□□□□ 0.05
SHC1-210ENST00000448116 CAMK4Q16566 473 aa15.39■□□□□ 0.05
SHC1-210ENST00000448116 LINS1Q8NG48 757 aa15.39■□□□□ 0.05
SHC1-210ENST00000448116 MTX1Q13505 466 aa15.39■□□□□ 0.05
SHC1-210ENST00000448116 NECTIN1Q15223 517 aa15.39■□□□□ 0.05
SHC1-210ENST00000448116 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
SHC1-210ENST00000448116 SPC24Q8NBT2 197 aa15.39■□□□□ 0.05
SHC1-210ENST00000448116 TFIP11Q9UBB9 837 aaKnown RBP15.39■□□□□ 0.05
SHC1-210ENST00000448116 A0A0D9SFI3 127 aa15.38■□□□□ 0.05
SHC1-210ENST00000448116 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
SHC1-210ENST00000448116 GOLGA6L4A6NEF3 574 aa15.38■□□□□ 0.05
SHC1-210ENST00000448116 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
SHC1-210ENST00000448116 USP42Q9H9J4 1324 aaKnown RBP15.38■□□□□ 0.05
SHC1-210ENST00000448116 SLC27A2O14975 620 aa15.38■□□□□ 0.05
SHC1-210ENST00000448116 ZC3H6P61129 1189 aaKnown RBP15.38■□□□□ 0.05
SHC1-210ENST00000448116 TAF6LQ9Y6J9 622 aa15.38■□□□□ 0.05
SHC1-210ENST00000448116 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 ST3GAL1Q11201 340 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 CDC37L1Q7L3B6 337 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 LRRC37A3O60309 1634 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 PSMA5P28066 241 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 NEXNQ0ZGT2 675 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 SASS6Q6UVJ0 657 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 MYD88Q99836 296 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 TM6SF1Q9BZW5 370 aa15.37■□□□□ 0.05
SHC1-210ENST00000448116 KDM4AO75164 1064 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 TERF1P54274 439 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 RNF20Q5VTR2 975 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 KRT85P78386 507 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 ARHGAP23Q9P227 1491 aa15.36■□□□□ 0.05
SHC1-210ENST00000448116 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHC1-210ENST00000448116 CACNA1FO60840 1977 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 HIP1O00291 1037 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 TTC6Q86TZ1 520 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 HOMEZQ8IX15 550 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 CKAP2LQ8IYA6 745 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 XAGE3Q8WTP9 111 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHC1-210ENST00000448116 COPS6Q7L5N1 327 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
SHC1-210ENST00000448116 NLRP2Q9NX02 1062 aa15.35■□□□□ 0.05
SHC1-210ENST00000448116 SLIT1O75093 1534 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 TSC1Q92574 1164 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
SHC1-210ENST00000448116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
SHC1-210ENST00000448116 IGKV5-2P06315 115 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 FOSBP53539 338 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 EPHA10Q5JZY3 1008 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 CCDC192P0DO97 292 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 HSP90B1P14625 803 aaKnown RBP15.34■□□□□ 0.05
SHC1-210ENST00000448116 LIG1P18858 919 aa15.34■□□□□ 0.05
SHC1-210ENST00000448116 CHGBP05060 677 aa15.33■□□□□ 0.05
SHC1-210ENST00000448116 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.05
SHC1-210ENST00000448116 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.05
SHC1-210ENST00000448116 PXDNQ92626 1479 aa15.33■□□□□ 0.04
SHC1-210ENST00000448116 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.04
SHC1-210ENST00000448116 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
SHC1-210ENST00000448116 DDX11Q96FC9 970 aa15.33■□□□□ 0.04
SHC1-210ENST00000448116 NUP62CLQ9H1M0 184 aa15.33■□□□□ 0.04
SHC1-210ENST00000448116 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 ATP5J2-PTCD1G3V325 749 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
SHC1-210ENST00000448116 PDCP20941 246 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 LRRC2Q9BYS8 371 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 VGLL3A8MV65 326 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 AP5Z1O43299 807 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
SHC1-210ENST00000448116 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms