RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 ZNF219Q9P2Y4 722 aaPredicted RBP32.16■■■□□ 2.74
UFD1-204ENST00000447868 ARFGEF2Q9Y6D5 1785 aa32.16■■■□□ 2.74
UFD1-204ENST00000447868 KLRG2A4D1S0 409 aaPredicted RBP32.14■■■□□ 2.74
UFD1-204ENST00000447868 ZNF784Q8NCA9 323 aaPredicted RBP32.14■■■□□ 2.74
UFD1-204ENST00000447868 CNKSR1Q969H4 720 aa32.14■■■□□ 2.74
UFD1-204ENST00000447868 ATP5J2-PTCD1G3V325 749 aa32.13■■■□□ 2.73
UFD1-204ENST00000447868 NPR1P16066 1061 aa32.13■■■□□ 2.73
UFD1-204ENST00000447868 VAMP4O75379 141 aa32.12■■■□□ 2.73
UFD1-204ENST00000447868 PRPF40BQ6NWY9 871 aaKnown RBP32.11■■■□□ 2.73
UFD1-204ENST00000447868 TRMT112Q9UI30 125 aaKnown RBP32.11■■■□□ 2.73
UFD1-204ENST00000447868 SLX4Q8IY92 1834 aa32.11■■■□□ 2.73
UFD1-204ENST00000447868 C21orf2O43822 256 aa32.1■■■□□ 2.73
UFD1-204ENST00000447868 DDX58O95786 925 aaKnown RBP32.1■■■□□ 2.73
UFD1-204ENST00000447868 SLC4A2P04920 1241 aa32.1■■■□□ 2.73
UFD1-204ENST00000447868 ISCA1Q9BUE6 129 aa32.1■■■□□ 2.73
UFD1-204ENST00000447868 RIC1Q4ADV7 1423 aa32.09■■■□□ 2.73
UFD1-204ENST00000447868 G2E3Q7L622 706 aa32.08■■■□□ 2.73
UFD1-204ENST00000447868 SYNE4Q8N205 404 aa32.08■■■□□ 2.73
UFD1-204ENST00000447868 MYD88Q99836 296 aa32.08■■■□□ 2.73
UFD1-204ENST00000447868 RNF123Q5XPI4 1314 aa32.07■■■□□ 2.72
UFD1-204ENST00000447868 RASSF7Q02833 373 aa32.07■■■□□ 2.72
UFD1-204ENST00000447868 CRY2Q49AN0 593 aa32.07■■■□□ 2.72
UFD1-204ENST00000447868 C3orf67Q6ZVT6 689 aa32.07■■■□□ 2.72
UFD1-204ENST00000447868 RPGRQ92834 1020 aaKnown RBP32.07■■■□□ 2.72
UFD1-204ENST00000447868 SH3TC1Q8TE82 1336 aa32.05■■■□□ 2.72
UFD1-204ENST00000447868 HCLS1P14317 486 aaPredicted RBP32.05■■■□□ 2.72
UFD1-204ENST00000447868 SLC10A5Q5PT55 438 aa32.05■■■□□ 2.72
UFD1-204ENST00000447868 NLRP3Q96P20 1036 aa32.05■■■□□ 2.72
UFD1-204ENST00000447868 MAP3K2Q9Y2U5 619 aa32.05■■■□□ 2.72
UFD1-204ENST00000447868 ADCY9O60503 1353 aa32.05■■■□□ 2.72
UFD1-204ENST00000447868 C9orf131Q5VYM1 1079 aa32.04■■■□□ 2.72
UFD1-204ENST00000447868 PI4KAP2A4QPH2 592 aa32.03■■■□□ 2.72
UFD1-204ENST00000447868 E9PSI1 815 aa32.03■■■□□ 2.72
UFD1-204ENST00000447868 ALDH1B1P30837 517 aa32.03■■■□□ 2.72
UFD1-204ENST00000447868 KSR2Q6VAB6 950 aa32.03■■■□□ 2.72
UFD1-204ENST00000447868 PI4KAP1Q8N8J0 262 aa32.03■■■□□ 2.72
UFD1-204ENST00000447868 METTL22Q9BUU2 404 aaPredicted RBP32.03■■■□□ 2.72
UFD1-204ENST00000447868 SBF1O95248 1867 aa32.02■■■□□ 2.72
UFD1-204ENST00000447868 TRIM28Q13263 835 aaKnown RBP32.02■■■□□ 2.72
UFD1-204ENST00000447868 FAM89AQ96GI7 184 aa32.02■■■□□ 2.72
UFD1-204ENST00000447868 RNF181Q9P0P0 153 aa32.02■■■□□ 2.72
UFD1-204ENST00000447868 CACNA1FO60840 1977 aa32.01■■■□□ 2.72
UFD1-204ENST00000447868 NFKBIEO00221 500 aa32.01■■■□□ 2.71
UFD1-204ENST00000447868 FLIIQ13045 1269 aa32.01■■■□□ 2.71
UFD1-204ENST00000447868 RTL5Q5HYW3 569 aaPredicted RBP32.01■■■□□ 2.71
UFD1-204ENST00000447868 CDCA7LQ96GN5 454 aa32.01■■■□□ 2.71
UFD1-204ENST00000447868 RBM17Q96I25 401 aaKnown RBP32.01■■■□□ 2.71
UFD1-204ENST00000447868 LAMB2P55268 1798 aa32■■■□□ 2.71
UFD1-204ENST00000447868 SLFN5Q08AF3 891 aa32■■■□□ 2.71
UFD1-204ENST00000447868 ZNF526Q8TF50 670 aaPredicted RBP32■■■□□ 2.71
UFD1-204ENST00000447868 C7orf43Q8WVR3 580 aa31.99■■■□□ 2.71
UFD1-204ENST00000447868 FER1L6Q2WGJ9 1857 aa31.98■■■□□ 2.71
UFD1-204ENST00000447868 HOXA10P31260 410 aaPredicted RBP31.98■■■□□ 2.71
UFD1-204ENST00000447868 FKBP5Q13451 457 aaPredicted RBP31.98■■■□□ 2.71
UFD1-204ENST00000447868 SOGA3Q5TF21 947 aa31.98■■■□□ 2.71
UFD1-204ENST00000447868 OLFM4Q6UX06 510 aa31.98■■■□□ 2.71
UFD1-204ENST00000447868 PRELPP51888 382 aa31.97■■■□□ 2.71
UFD1-204ENST00000447868 DDX60Q8IY21 1712 aaKnown RBP31.97■■■□□ 2.71
UFD1-204ENST00000447868 CCDC88AQ3V6T2 1871 aa31.97■■■□□ 2.71
UFD1-204ENST00000447868 LMNB1P20700 586 aa31.96■■■□□ 2.71
UFD1-204ENST00000447868 CCDC191Q8NCU4 936 aa31.96■■■□□ 2.71
UFD1-204ENST00000447868 CWC25Q9NXE8 425 aaPredicted RBP31.96■■■□□ 2.71
UFD1-204ENST00000447868 NEXNQ0ZGT2 675 aa31.95■■■□□ 2.71
UFD1-204ENST00000447868 CCDC93Q567U6 631 aa31.95■■■□□ 2.71
UFD1-204ENST00000447868 CRAMP1Q96RY5 1269 aa31.95■■■□□ 2.71
UFD1-204ENST00000447868 ZBTB38Q8NAP3 1195 aaPredicted RBP31.94■■■□□ 2.7
UFD1-204ENST00000447868 JARID2Q92833 1246 aaPredicted RBP31.94■■■□□ 2.7
UFD1-204ENST00000447868 TAOK3Q9H2K8 898 aa31.94■■■□□ 2.7
UFD1-204ENST00000447868 IRS4O14654 1257 aaPredicted RBP31.93■■■□□ 2.7
UFD1-204ENST00000447868 IGKV5-2P06315 115 aa31.92■■■□□ 2.7
UFD1-204ENST00000447868 GPBP1L1Q9HC44 474 aaPredicted RBP31.92■■■□□ 2.7
UFD1-204ENST00000447868 PPEF1O14829 653 aaPredicted RBP31.91■■■□□ 2.7
UFD1-204ENST00000447868 CWF19L2Q2TBE0 894 aaKnown RBP31.91■■■□□ 2.7
UFD1-204ENST00000447868 DNAAF4Q8WXU2 420 aa31.91■■■□□ 2.7
UFD1-204ENST00000447868 ABCC4O15439 1325 aa31.91■■■□□ 2.7
UFD1-204ENST00000447868 PCCAP05165 728 aaPredicted RBP31.9■■■□□ 2.7
UFD1-204ENST00000447868 DDX46Q7L014 1031 aaKnown RBP31.9■■■□□ 2.7
UFD1-204ENST00000447868 SLC51AQ86UW1 340 aa31.89■■■□□ 2.7
UFD1-204ENST00000447868 RTKN2Q8IZC4 609 aa31.89■■■□□ 2.7
UFD1-204ENST00000447868 LTBP3Q9NS15 1303 aa31.89■■■□□ 2.7
UFD1-204ENST00000447868 NEURL1BA8MQ27 555 aa31.88■■■□□ 2.69
UFD1-204ENST00000447868 TRMT2AQ8IZ69 625 aaKnown RBP31.88■■■□□ 2.69
UFD1-204ENST00000447868 TAF1P21675 1872 aa31.87■■■□□ 2.69
UFD1-204ENST00000447868 F6X3S4 739 aa31.87■■■□□ 2.69
UFD1-204ENST00000447868 TIAM2Q8IVF5 1701 aa31.86■■■□□ 2.69
UFD1-204ENST00000447868 FKBP4Q02790 459 aaKnown RBP eCLIP31.86■■■□□ 2.69
UFD1-204ENST00000447868 SF3B3Q15393 1217 aaKnown RBP31.86■■■□□ 2.69
UFD1-204ENST00000447868 HNRNPUQ00839 825 aaKnown RBP eCLIP31.85■■■□□ 2.69
UFD1-204ENST00000447868 HSP90B1P14625 803 aaKnown RBP31.84■■■□□ 2.69
UFD1-204ENST00000447868 GRAPQ13588 217 aa31.84■■■□□ 2.69
UFD1-204ENST00000447868 CC2D2BQ6DHV5 1058 aa31.84■■■□□ 2.69
UFD1-204ENST00000447868 GRAPLQ8TC17 118 aaPredicted RBP31.84■■■□□ 2.69
UFD1-204ENST00000447868 ZNF277Q9NRM2 450 aaPredicted RBP31.84■■■□□ 2.69
UFD1-204ENST00000447868 DICER1Q9UPY3 1922 aaKnown RBP31.83■■■□□ 2.69
UFD1-204ENST00000447868 MRPL50Q8N5N7 158 aaKnown RBP31.83■■■□□ 2.69
UFD1-204ENST00000447868 TMX4Q9H1E5 349 aaPredicted RBP31.83■■■□□ 2.69
UFD1-204ENST00000447868 PDE8AO60658 829 aa31.82■■■□□ 2.68
UFD1-204ENST00000447868 BBOX1O75936 387 aa31.82■■■□□ 2.68
UFD1-204ENST00000447868 LINS1Q8NG48 757 aa31.82■■■□□ 2.68
UFD1-204ENST00000447868 ATP6V0A2Q9Y487 856 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms