RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
SREBF1-207ENST00000447641 ANKRD36CQ5JPF3 1778 aa18.15■□□□□ 0.5
SREBF1-207ENST00000447641 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
SREBF1-207ENST00000447641 TCIRG1Q13488 830 aa18.15■□□□□ 0.5
SREBF1-207ENST00000447641 PRR5LQ6MZQ0 368 aa18.15■□□□□ 0.5
SREBF1-207ENST00000447641 C16orf71Q8IYS4 520 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-207ENST00000447641 STK31Q9BXU1 1019 aa18.15■□□□□ 0.5
SREBF1-207ENST00000447641 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
SREBF1-207ENST00000447641 UBN2Q6ZU65 1347 aa18.14■□□□□ 0.49
SREBF1-207ENST00000447641 ARFGEF2Q9Y6D5 1785 aa18.13■□□□□ 0.49
SREBF1-207ENST00000447641 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
SREBF1-207ENST00000447641 G2E3Q7L622 706 aa18.13■□□□□ 0.49
SREBF1-207ENST00000447641 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
SREBF1-207ENST00000447641 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-207ENST00000447641 TRIM28Q13263 835 aaKnown RBP18.12■□□□□ 0.49
SREBF1-207ENST00000447641 PARP10Q53GL7 1025 aa18.12■□□□□ 0.49
SREBF1-207ENST00000447641 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
SREBF1-207ENST00000447641 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-207ENST00000447641 CNBD1Q8NA66 436 aa18.12■□□□□ 0.49
SREBF1-207ENST00000447641 ISCA1Q9BUE6 129 aa18.12■□□□□ 0.49
SREBF1-207ENST00000447641 ZBED9Q6R2W3 1325 aa18.12■□□□□ 0.49
SREBF1-207ENST00000447641 GPTP24298 496 aa18.11■□□□□ 0.49
SREBF1-207ENST00000447641 SUSD4Q5VX71 490 aa18.11■□□□□ 0.49
SREBF1-207ENST00000447641 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
SREBF1-207ENST00000447641 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
SREBF1-207ENST00000447641 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-207ENST00000447641 NFKBIEO00221 500 aa18.1■□□□□ 0.49
SREBF1-207ENST00000447641 NTSR2O95665 410 aa18.1■□□□□ 0.49
SREBF1-207ENST00000447641 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-207ENST00000447641 KSR2Q6VAB6 950 aa18.1■□□□□ 0.49
SREBF1-207ENST00000447641 NLRP10Q86W26 655 aa18.1■□□□□ 0.49
SREBF1-207ENST00000447641 SMC1BQ8NDV3 1235 aa18.1■□□□□ 0.49
SREBF1-207ENST00000447641 NYXQ9GZU5 481 aa18.1■□□□□ 0.49
SREBF1-207ENST00000447641 POTECB2RU33 542 aa18.09■□□□□ 0.49
SREBF1-207ENST00000447641 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
SREBF1-207ENST00000447641 FLIIQ13045 1269 aa18.09■□□□□ 0.49
SREBF1-207ENST00000447641 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
SREBF1-207ENST00000447641 YTHDC1Q96MU7 727 aaKnown RBP18.09■□□□□ 0.49
SREBF1-207ENST00000447641 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-207ENST00000447641 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 CAPN15O75808 1086 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 PDE6BP35913 854 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 ST5P78524 1137 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 PPP1R42Q7Z4L9 355 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 CCDC24Q8N4L8 307 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
SREBF1-207ENST00000447641 RIC1Q4ADV7 1423 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 RNF123Q5XPI4 1314 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 LMNB1P20700 586 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 SLC10A5Q5PT55 438 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
SREBF1-207ENST00000447641 MAP3K2Q9Y2U5 619 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 SLX4Q8IY92 1834 aa18.07■□□□□ 0.48
SREBF1-207ENST00000447641 FAM177BA6PVY3 158 aa18.06■□□□□ 0.48
SREBF1-207ENST00000447641 ALDH1L2Q3SY69 923 aa18.06■□□□□ 0.48
SREBF1-207ENST00000447641 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
SREBF1-207ENST00000447641 TNS4Q8IZW8 715 aa18.06■□□□□ 0.48
SREBF1-207ENST00000447641 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
SREBF1-207ENST00000447641 SSH1Q8WYL5 1049 aa18.06■□□□□ 0.48
SREBF1-207ENST00000447641 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
SREBF1-207ENST00000447641 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
SREBF1-207ENST00000447641 H0YIN7 160 aa18.05■□□□□ 0.48
SREBF1-207ENST00000447641 HSPA1AP0DMV8 641 aaKnown RBP18.05■□□□□ 0.48
SREBF1-207ENST00000447641 HSPA1BP0DMV9 641 aaKnown RBP18.05■□□□□ 0.48
SREBF1-207ENST00000447641 SRGNP10124 158 aa18.05■□□□□ 0.48
SREBF1-207ENST00000447641 NUTM1Q86Y26 1132 aa18.05■□□□□ 0.48
SREBF1-207ENST00000447641 C2CD5Q86YS7 1000 aa18.05■□□□□ 0.48
SREBF1-207ENST00000447641 NPHP1O15259 732 aa18.04■□□□□ 0.48
SREBF1-207ENST00000447641 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
SREBF1-207ENST00000447641 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-207ENST00000447641 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
SREBF1-207ENST00000447641 MYD88Q99836 296 aa18.04■□□□□ 0.48
SREBF1-207ENST00000447641 VEGFAP15692 232 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-207ENST00000447641 GTF2E1P29083 439 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-207ENST00000447641 FKBP5Q13451 457 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-207ENST00000447641 CRY2Q49AN0 593 aa18.03■□□□□ 0.48
SREBF1-207ENST00000447641 SYNE4Q8N205 404 aa18.03■□□□□ 0.48
SREBF1-207ENST00000447641 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
SREBF1-207ENST00000447641 STYK1Q6J9G0 422 aa18.02■□□□□ 0.48
SREBF1-207ENST00000447641 DNAAF4Q8WXU2 420 aa18.02■□□□□ 0.48
SREBF1-207ENST00000447641 TRMT112Q9UI30 125 aaKnown RBP18.02■□□□□ 0.48
SREBF1-207ENST00000447641 SH3TC1Q8TE82 1336 aa18.01■□□□□ 0.47
SREBF1-207ENST00000447641 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
SREBF1-207ENST00000447641 ADAMTSL1Q8N6G6 1762 aa18■□□□□ 0.47
SREBF1-207ENST00000447641 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
SREBF1-207ENST00000447641 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
SREBF1-207ENST00000447641 ZBTB38Q8NAP3 1195 aaPredicted RBP18■□□□□ 0.47
SREBF1-207ENST00000447641 FAM89AQ96GI7 184 aa18■□□□□ 0.47
SREBF1-207ENST00000447641 MASTLQ96GX5 879 aa18■□□□□ 0.47
SREBF1-207ENST00000447641 CWC25Q9NXE8 425 aaPredicted RBP18■□□□□ 0.47
SREBF1-207ENST00000447641 DDX60Q8IY21 1712 aaKnown RBP18■□□□□ 0.47
SREBF1-207ENST00000447641 PTPRCP08575 1304 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 LAMB2P55268 1798 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 F6X3S4 739 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 PCCAP05165 728 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-207ENST00000447641 POTEIP0CG38 1075 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 POTEJP0CG39 1038 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 NPR1P16066 1061 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms