RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 MCM2P49736 904 aa23.68■■□□□ 1.38
FAM3A-215ENST00000447601 PHLPP1O60346 1717 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 HIP1O00291 1037 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 MCM4P33991 863 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 HSPA4P34932 840 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 TCIRG1Q13488 830 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 GSE1Q14687 1217 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 KIAA1211Q6ZU35 1233 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 ISCA1Q9BUE6 129 aa23.67■■□□□ 1.38
FAM3A-215ENST00000447601 TLR7Q9NYK1 1049 aaKnown RBP23.67■■□□□ 1.38
FAM3A-215ENST00000447601 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
FAM3A-215ENST00000447601 FOXD4L1Q9NU39 408 aa23.66■■□□□ 1.38
FAM3A-215ENST00000447601 NEK4P51957 841 aa23.66■■□□□ 1.38
FAM3A-215ENST00000447601 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
FAM3A-215ENST00000447601 RAB3GAP1Q15042 981 aa23.66■■□□□ 1.38
FAM3A-215ENST00000447601 CWC27Q6UX04 472 aaKnown RBP23.66■■□□□ 1.38
FAM3A-215ENST00000447601 PALD1Q9ULE6 856 aa23.66■■□□□ 1.38
FAM3A-215ENST00000447601 ZNF330Q9Y3S2 320 aaPredicted RBP23.66■■□□□ 1.38
FAM3A-215ENST00000447601 TOM1O60784 492 aa23.65■■□□□ 1.38
FAM3A-215ENST00000447601 TFCP2Q12800 502 aa23.65■■□□□ 1.38
FAM3A-215ENST00000447601 TNNI3KQ59H18 835 aa23.65■■□□□ 1.38
FAM3A-215ENST00000447601 CHMP3Q9Y3E7 222 aa23.65■■□□□ 1.38
FAM3A-215ENST00000447601 FPGT-TNNI3KV9GXZ4 949 aa23.65■■□□□ 1.38
FAM3A-215ENST00000447601 LSG1Q9H089 658 aaKnown RBP23.64■■□□□ 1.38
FAM3A-215ENST00000447601 SYTL4Q96C24 671 aaPredicted RBP23.63■■□□□ 1.37
FAM3A-215ENST00000447601 WNK3Q9BYP7 1800 aa23.63■■□□□ 1.37
FAM3A-215ENST00000447601 DDB1Q16531 1140 aa23.63■■□□□ 1.37
FAM3A-215ENST00000447601 CWC22Q9HCG8 908 aaKnown RBP23.63■■□□□ 1.37
FAM3A-215ENST00000447601 TJP1Q07157 1748 aa23.62■■□□□ 1.37
FAM3A-215ENST00000447601 CYP19A1P11511 503 aaPredicted RBP23.62■■□□□ 1.37
FAM3A-215ENST00000447601 AK9Q5TCS8 1911 aa23.62■■□□□ 1.37
FAM3A-215ENST00000447601 MAP3K15Q6ZN16 1313 aa23.62■■□□□ 1.37
FAM3A-215ENST00000447601 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
FAM3A-215ENST00000447601 TNPO1Q92973 898 aaKnown RBP23.61■■□□□ 1.37
FAM3A-215ENST00000447601 BOLA2Q9H3K6 86 aa23.61■■□□□ 1.37
FAM3A-215ENST00000447601 ITGB4P16144 1822 aa23.61■■□□□ 1.37
FAM3A-215ENST00000447601 NRAPQ86VF7 1730 aa23.61■■□□□ 1.37
FAM3A-215ENST00000447601 ATP5JP18859 108 aa23.61■■□□□ 1.37
FAM3A-215ENST00000447601 PRIM1P49642 420 aaKnown RBP23.61■■□□□ 1.37
FAM3A-215ENST00000447601 GBP4Q96PP9 640 aa23.61■■□□□ 1.37
FAM3A-215ENST00000447601 DBNLQ9UJU6 430 aaKnown RBP23.61■■□□□ 1.37
FAM3A-215ENST00000447601 GIGYF2Q6Y7W6 1299 aaKnown RBP23.6■■□□□ 1.37
FAM3A-215ENST00000447601 SLC4A9Q96Q91 983 aa23.6■■□□□ 1.37
FAM3A-215ENST00000447601 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
FAM3A-215ENST00000447601 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
FAM3A-215ENST00000447601 PCCAP05165 728 aaPredicted RBP23.59■■□□□ 1.37
FAM3A-215ENST00000447601 IL15P40933 162 aaPredicted RBP23.59■■□□□ 1.37
FAM3A-215ENST00000447601 HSP90AB3PQ58FF7 597 aa23.59■■□□□ 1.37
FAM3A-215ENST00000447601 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
FAM3A-215ENST00000447601 GPR108Q9NPR9 543 aa23.59■■□□□ 1.37
FAM3A-215ENST00000447601 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
FAM3A-215ENST00000447601 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
FAM3A-215ENST00000447601 FSD1Q9BTV5 496 aa23.59■■□□□ 1.37
FAM3A-215ENST00000447601 CIAO1O76071 339 aa23.58■■□□□ 1.37
FAM3A-215ENST00000447601 PIP4K2BP78356 416 aa23.58■■□□□ 1.37
FAM3A-215ENST00000447601 NUCB2P80303 420 aa23.58■■□□□ 1.37
FAM3A-215ENST00000447601 ATG9AQ7Z3C6 839 aa23.57■■□□□ 1.36
FAM3A-215ENST00000447601 ZBTB38Q8NAP3 1195 aaPredicted RBP23.57■■□□□ 1.36
FAM3A-215ENST00000447601 EYA2O00167 538 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 BARGINQ6ZT62 677 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 TMX3Q96JJ7 454 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 ARXQ96QS3 562 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 PLA2G12BQ9BX93 195 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 SNRKQ9NRH2 765 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 SNX14Q9Y5W7 946 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 SLIT2O94813 1529 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 DBNDD2Q9BQY9 259 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 ZBTB1Q9Y2K1 713 aa23.56■■□□□ 1.36
FAM3A-215ENST00000447601 RFX7Q2KHR2 1363 aa23.55■■□□□ 1.36
FAM3A-215ENST00000447601 PTMSP20962 102 aa23.55■■□□□ 1.36
FAM3A-215ENST00000447601 IL6STP40189 918 aaPredicted RBP23.55■■□□□ 1.36
FAM3A-215ENST00000447601 NMIQ13287 307 aaPredicted RBP23.55■■□□□ 1.36
FAM3A-215ENST00000447601 FBXO3Q9UK99 471 aa23.55■■□□□ 1.36
FAM3A-215ENST00000447601 CCDC57Q2TAC2 916 aa23.54■■□□□ 1.36
FAM3A-215ENST00000447601 UPF3BQ9BZI7 483 aaKnown RBP23.54■■□□□ 1.36
FAM3A-215ENST00000447601 CCDC171Q6TFL3 1326 aa23.54■■□□□ 1.36
FAM3A-215ENST00000447601 CCDC9Q9Y3X0 531 aaKnown RBP23.54■■□□□ 1.36
FAM3A-215ENST00000447601 DOT1LQ8TEK3 1739 aa23.54■■□□□ 1.36
FAM3A-215ENST00000447601 CDHR2Q9BYE9 1310 aa23.54■■□□□ 1.36
FAM3A-215ENST00000447601 ERVV-1B6SEH8 477 aa23.53■■□□□ 1.36
FAM3A-215ENST00000447601 CUL4AQ13619 759 aa23.53■■□□□ 1.36
FAM3A-215ENST00000447601 CLEC17AQ6ZS10 378 aa23.53■■□□□ 1.36
FAM3A-215ENST00000447601 FAM227BQ96M60 508 aa23.53■■□□□ 1.36
FAM3A-215ENST00000447601 HAUS7Q99871 368 aa23.53■■□□□ 1.36
FAM3A-215ENST00000447601 NWD2Q9ULI1 1742 aa23.53■■□□□ 1.36
FAM3A-215ENST00000447601 SSFA2P28290 1259 aa23.52■■□□□ 1.36
FAM3A-215ENST00000447601 PTH1RQ03431 593 aa23.52■■□□□ 1.36
FAM3A-215ENST00000447601 HLFQ16534 295 aa23.52■■□□□ 1.36
FAM3A-215ENST00000447601 NLRP10Q86W26 655 aa23.52■■□□□ 1.36
FAM3A-215ENST00000447601 MARCH10Q8NA82 808 aaPredicted RBP23.52■■□□□ 1.36
FAM3A-215ENST00000447601 FAM89AQ96GI7 184 aa23.52■■□□□ 1.36
FAM3A-215ENST00000447601 ZGPATQ8N5A5 531 aaKnown RBP23.52■■□□□ 1.36
FAM3A-215ENST00000447601 KCNB2Q92953 911 aa23.52■■□□□ 1.36
FAM3A-215ENST00000447601 INTS4Q96HW7 963 aaKnown RBP23.52■■□□□ 1.36
FAM3A-215ENST00000447601 CSF1RP07333 972 aa23.51■■□□□ 1.35
FAM3A-215ENST00000447601 RASEFQ8IZ41 740 aa23.51■■□□□ 1.35
FAM3A-215ENST00000447601 ZNF594Q96JF6 807 aaPredicted RBP23.51■■□□□ 1.35
FAM3A-215ENST00000447601 MED23Q9ULK4 1368 aa23.5■■□□□ 1.35
FAM3A-215ENST00000447601 CYP2E1P05181 493 aaPredicted RBP23.5■■□□□ 1.35
FAM3A-215ENST00000447601 LRRC24Q50LG9 513 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms