RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 UTP14AQ9BVJ6 771 aaKnown RBP19.09■□□□□ 0.65
HDAC4-204ENST00000446876 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
HDAC4-204ENST00000446876 ZNF219Q9P2Y4 722 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-204ENST00000446876 CACNA1FO60840 1977 aa19.08■□□□□ 0.65
HDAC4-204ENST00000446876 C3orf67Q6ZVT6 689 aa19.08■□□□□ 0.64
HDAC4-204ENST00000446876 SYNE4Q8N205 404 aa19.08■□□□□ 0.64
HDAC4-204ENST00000446876 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.64
HDAC4-204ENST00000446876 KLRG2A4D1S0 409 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-204ENST00000446876 STYK1Q6J9G0 422 aa19.07■□□□□ 0.64
HDAC4-204ENST00000446876 CDCA7LQ96GN5 454 aa19.07■□□□□ 0.64
HDAC4-204ENST00000446876 MASTLQ96GX5 879 aa19.07■□□□□ 0.64
HDAC4-204ENST00000446876 ISCA1Q9BUE6 129 aa19.07■□□□□ 0.64
HDAC4-204ENST00000446876 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
HDAC4-204ENST00000446876 SBF1O95248 1867 aa19.07■□□□□ 0.64
HDAC4-204ENST00000446876 RIC1Q4ADV7 1423 aa19.07■□□□□ 0.64
HDAC4-204ENST00000446876 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
HDAC4-204ENST00000446876 MYD88Q99836 296 aa19.06■□□□□ 0.64
HDAC4-204ENST00000446876 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
HDAC4-204ENST00000446876 TRMT112Q9UI30 125 aaKnown RBP19.06■□□□□ 0.64
HDAC4-204ENST00000446876 ADCY9O60503 1353 aa19.06■□□□□ 0.64
HDAC4-204ENST00000446876 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
HDAC4-204ENST00000446876 NPR1P16066 1061 aa19.05■□□□□ 0.64
HDAC4-204ENST00000446876 RASSF7Q02833 373 aa19.05■□□□□ 0.64
HDAC4-204ENST00000446876 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
HDAC4-204ENST00000446876 CNKSR1Q969H4 720 aa19.05■□□□□ 0.64
HDAC4-204ENST00000446876 FER1L6Q2WGJ9 1857 aa19.05■□□□□ 0.64
HDAC4-204ENST00000446876 E9PSI1 815 aa19.04■□□□□ 0.64
HDAC4-204ENST00000446876 C21orf2O43822 256 aa19.04■□□□□ 0.64
HDAC4-204ENST00000446876 DDX58O95786 925 aaKnown RBP19.04■□□□□ 0.64
HDAC4-204ENST00000446876 HCLS1P14317 486 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-204ENST00000446876 SLFN5Q08AF3 891 aa19.04■□□□□ 0.64
HDAC4-204ENST00000446876 ZNF784Q8NCA9 323 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-204ENST00000446876 MAP3K2Q9Y2U5 619 aa19.04■□□□□ 0.64
HDAC4-204ENST00000446876 PI4KAP2A4QPH2 592 aa19.03■□□□□ 0.64
HDAC4-204ENST00000446876 CRY2Q49AN0 593 aa19.03■□□□□ 0.64
HDAC4-204ENST00000446876 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
HDAC4-204ENST00000446876 PI4KAP1Q8N8J0 262 aa19.03■□□□□ 0.64
HDAC4-204ENST00000446876 SH3TC1Q8TE82 1336 aa19.02■□□□□ 0.64
HDAC4-204ENST00000446876 FLIIQ13045 1269 aa19.02■□□□□ 0.64
HDAC4-204ENST00000446876 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
HDAC4-204ENST00000446876 FAM89AQ96GI7 184 aa19.02■□□□□ 0.64
HDAC4-204ENST00000446876 METTL22Q9BUU2 404 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-204ENST00000446876 TAF1P21675 1872 aa19.02■□□□□ 0.64
HDAC4-204ENST00000446876 RNF123Q5XPI4 1314 aa19.01■□□□□ 0.63
HDAC4-204ENST00000446876 SLC10A5Q5PT55 438 aa19.01■□□□□ 0.63
HDAC4-204ENST00000446876 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
HDAC4-204ENST00000446876 SLC51AQ86UW1 340 aa19.01■□□□□ 0.63
HDAC4-204ENST00000446876 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
HDAC4-204ENST00000446876 NFKBIEO00221 500 aa19■□□□□ 0.63
HDAC4-204ENST00000446876 PRELPP51888 382 aa19■□□□□ 0.63
HDAC4-204ENST00000446876 TRIM28Q13263 835 aaKnown RBP19■□□□□ 0.63
HDAC4-204ENST00000446876 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
HDAC4-204ENST00000446876 C9orf131Q5VYM1 1079 aa19■□□□□ 0.63
HDAC4-204ENST00000446876 JARID2Q92833 1246 aaPredicted RBP19■□□□□ 0.63
HDAC4-204ENST00000446876 NLRP3Q96P20 1036 aa19■□□□□ 0.63
HDAC4-204ENST00000446876 TIAM2Q8IVF5 1701 aa18.99■□□□□ 0.63
HDAC4-204ENST00000446876 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
HDAC4-204ENST00000446876 CWF19L2Q2TBE0 894 aaKnown RBP18.98■□□□□ 0.63
HDAC4-204ENST00000446876 C7orf43Q8WVR3 580 aa18.98■□□□□ 0.63
HDAC4-204ENST00000446876 RNF181Q9P0P0 153 aa18.98■□□□□ 0.63
HDAC4-204ENST00000446876 ALDH1B1P30837 517 aa18.97■□□□□ 0.63
HDAC4-204ENST00000446876 HOXA10P31260 410 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-204ENST00000446876 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
HDAC4-204ENST00000446876 ZNF526Q8TF50 670 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-204ENST00000446876 RBM17Q96I25 401 aaKnown RBP18.97■□□□□ 0.63
HDAC4-204ENST00000446876 CWC25Q9NXE8 425 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-204ENST00000446876 COL4A1P02462 1669 aa18.97■□□□□ 0.63
HDAC4-204ENST00000446876 F6X3S4 739 aa18.96■□□□□ 0.63
HDAC4-204ENST00000446876 IRS4O14654 1257 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-204ENST00000446876 TRMT2AQ8IZ69 625 aaKnown RBP18.96■□□□□ 0.63
HDAC4-204ENST00000446876 ZBTB38Q8NAP3 1195 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-204ENST00000446876 CCDC191Q8NCU4 936 aa18.96■□□□□ 0.63
HDAC4-204ENST00000446876 ABCC4O15439 1325 aa18.96■□□□□ 0.63
HDAC4-204ENST00000446876 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
HDAC4-204ENST00000446876 NEXNQ0ZGT2 675 aa18.95■□□□□ 0.62
HDAC4-204ENST00000446876 CCDC93Q567U6 631 aa18.95■□□□□ 0.62
HDAC4-204ENST00000446876 DNAAF4Q8WXU2 420 aa18.95■□□□□ 0.62
HDAC4-204ENST00000446876 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
HDAC4-204ENST00000446876 NEURL1BA8MQ27 555 aa18.94■□□□□ 0.62
HDAC4-204ENST00000446876 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-204ENST00000446876 PCCAP05165 728 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-204ENST00000446876 LMNB1P20700 586 aa18.94■□□□□ 0.62
HDAC4-204ENST00000446876 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
HDAC4-204ENST00000446876 TAOK3Q9H2K8 898 aa18.94■□□□□ 0.62
HDAC4-204ENST00000446876 MYH3P11055 1940 aa18.94■□□□□ 0.62
HDAC4-204ENST00000446876 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
HDAC4-204ENST00000446876 SOGA3Q5TF21 947 aa18.93■□□□□ 0.62
HDAC4-204ENST00000446876 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
HDAC4-204ENST00000446876 SSH1Q8WYL5 1049 aa18.93■□□□□ 0.62
HDAC4-204ENST00000446876 DDX46Q7L014 1031 aaKnown RBP18.91■□□□□ 0.62
HDAC4-204ENST00000446876 LTBP3Q9NS15 1303 aa18.91■□□□□ 0.62
HDAC4-204ENST00000446876 SF3B3Q15393 1217 aaKnown RBP18.9■□□□□ 0.62
HDAC4-204ENST00000446876 UBE3BQ7Z3V4 1068 aa18.9■□□□□ 0.62
HDAC4-204ENST00000446876 CCDC85AQ96PX6 553 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-204ENST00000446876 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-204ENST00000446876 LRRC37AA6NMS7 1700 aa18.89■□□□□ 0.61
HDAC4-204ENST00000446876 SPEF2Q9C093 1822 aa18.89■□□□□ 0.61
HDAC4-204ENST00000446876 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
HDAC4-204ENST00000446876 GRAPQ13588 217 aa18.89■□□□□ 0.61
HDAC4-204ENST00000446876 GCKRQ14397 625 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms