RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 NCOA7Q8NI08 942 aa20.73■□□□□ 0.91
ATG9A-215ENST00000446716 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
ATG9A-215ENST00000446716 IARSP41252 1262 aaKnown RBP20.73■□□□□ 0.91
ATG9A-215ENST00000446716 MICU3Q86XE3 530 aa20.73■□□□□ 0.91
ATG9A-215ENST00000446716 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
ATG9A-215ENST00000446716 DESP17661 470 aa20.73■□□□□ 0.91
ATG9A-215ENST00000446716 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
ATG9A-215ENST00000446716 SCAND2PQ9GZW5 306 aaPredicted RBP20.72■□□□□ 0.91
ATG9A-215ENST00000446716 TRAPPC3LQ5T215 181 aa20.72■□□□□ 0.91
ATG9A-215ENST00000446716 NAA16Q6N069 864 aaPredicted RBP20.72■□□□□ 0.91
ATG9A-215ENST00000446716 IRS4O14654 1257 aaPredicted RBP20.72■□□□□ 0.91
ATG9A-215ENST00000446716 CCDC144CPQ8IYA2 1237 aa20.72■□□□□ 0.91
ATG9A-215ENST00000446716 SMTNL1A8MU46 457 aa20.71■□□□□ 0.91
ATG9A-215ENST00000446716 BAG4O95429 457 aaKnown RBP20.71■□□□□ 0.91
ATG9A-215ENST00000446716 TEX35Q5T0J7 233 aa20.71■□□□□ 0.91
ATG9A-215ENST00000446716 A0A1W2PP64 1363 aa20.71■□□□□ 0.91
ATG9A-215ENST00000446716 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
ATG9A-215ENST00000446716 NEK1Q96PY6 1258 aa20.71■□□□□ 0.91
ATG9A-215ENST00000446716 STK32BQ9NY57 414 aa20.71■□□□□ 0.91
ATG9A-215ENST00000446716 CCNL1Q9UK58 526 aaPredicted RBP20.71■□□□□ 0.91
ATG9A-215ENST00000446716 MAP3K11Q16584 847 aa20.7■□□□□ 0.9
ATG9A-215ENST00000446716 BMP2KLQ5H9B9 411 aa20.7■□□□□ 0.9
ATG9A-215ENST00000446716 HMG20BQ9P0W2 317 aa20.7■□□□□ 0.9
ATG9A-215ENST00000446716 SLAIN2Q9P270 581 aa20.7■□□□□ 0.9
ATG9A-215ENST00000446716 SHANK2Q9UPX8 1470 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 SLC4A4Q9Y6R1 1079 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 CTTNBP2Q8WZ74 1663 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 TSPY3P0CV98 308 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 TSPY8P0CW00 308 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 GRM1Q13255 1194 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 POLR3AO14802 1390 aaPredicted RBP20.69■□□□□ 0.9
ATG9A-215ENST00000446716 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
ATG9A-215ENST00000446716 PICALMQ13492 652 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 ERCC4Q92889 916 aaPredicted RBP20.69■□□□□ 0.9
ATG9A-215ENST00000446716 TESK2Q96S53 571 aa20.69■□□□□ 0.9
ATG9A-215ENST00000446716 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
ATG9A-215ENST00000446716 PATL2C9JE40 543 aaKnown RBP20.68■□□□□ 0.9
ATG9A-215ENST00000446716 TRMT1LQ7Z2T5 733 aaKnown RBP20.68■□□□□ 0.9
ATG9A-215ENST00000446716 SKAP1Q86WV1 359 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
ATG9A-215ENST00000446716 EYA3Q99504 573 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 TTC22Q5TAA0 569 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 DNAI2Q9GZS0 605 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 VEZTQ9HBM0 779 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 HSP90AA2PQ14568 343 aaPredicted RBP20.68■□□□□ 0.9
ATG9A-215ENST00000446716 SLC9C2Q5TAH2 1124 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 TSG101Q99816 390 aa20.68■□□□□ 0.9
ATG9A-215ENST00000446716 TCOF1Q13428 1488 aaKnown RBP20.67■□□□□ 0.9
ATG9A-215ENST00000446716 NF2P35240 595 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 ATP8B2P98198 1209 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 KLHL10Q6JEL2 608 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 TBC1D9Q6ZT07 1266 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 ORC3Q9UBD5 711 aaPredicted RBP20.67■□□□□ 0.9
ATG9A-215ENST00000446716 POTEJP0CG39 1038 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 CWF19L2Q2TBE0 894 aaKnown RBP20.67■□□□□ 0.9
ATG9A-215ENST00000446716 CCDC181Q5TID7 509 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 MCM5P33992 734 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 RAB11FIP4Q86YS3 637 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 HELBQ8NG08 1087 aaPredicted RBP20.67■□□□□ 0.9
ATG9A-215ENST00000446716 CAMK4Q16566 473 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 RBM26Q5T8P6 1007 aaKnown RBP20.67■□□□□ 0.9
ATG9A-215ENST00000446716 ESR2Q92731 530 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 PHACTR3Q96KR7 559 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 ZFYVE9O95405 1425 aa20.67■□□□□ 0.9
ATG9A-215ENST00000446716 WTAPQ15007 396 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 PPP4R3BQ5MIZ7 849 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
ATG9A-215ENST00000446716 PLEKHH1Q9ULM0 1364 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 MCM4P33991 863 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 CFAP100Q494V2 611 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 FILIP1Q7Z7B0 1213 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 FAM98CQ17RN3 349 aaKnown RBP20.66■□□□□ 0.9
ATG9A-215ENST00000446716 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 ANKRD44Q8N8A2 993 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 CARD14Q9BXL6 1004 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 KRT23Q9C075 422 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 TCP11L1Q9NUJ3 509 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 KIF20AO95235 890 aa20.66■□□□□ 0.9
ATG9A-215ENST00000446716 CCDC178Q5BJE1 867 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 SETQ01105 290 aaPredicted RBP20.65■□□□□ 0.9
ATG9A-215ENST00000446716 MPNDQ8N594 471 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 CNBD1Q8NA66 436 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 SLC26A6Q9BXS9 759 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 ANKRD2Q9GZV1 360 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 PA2G4Q9UQ80 394 aaKnown RBP20.65■□□□□ 0.9
ATG9A-215ENST00000446716 SAMM50Q9Y512 469 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 RIMBP2O15034 1052 aa20.65■□□□□ 0.9
ATG9A-215ENST00000446716 ERLIN2O94905 339 aa20.64■□□□□ 0.9
ATG9A-215ENST00000446716 LIG1P18858 919 aa20.64■□□□□ 0.89
ATG9A-215ENST00000446716 TRAF1Q13077 416 aa20.64■□□□□ 0.89
ATG9A-215ENST00000446716 KRT24Q2M2I5 525 aa20.64■□□□□ 0.89
ATG9A-215ENST00000446716 NEBLO76041 1014 aa20.64■□□□□ 0.89
ATG9A-215ENST00000446716 CALML4Q96GE6 196 aa20.63■□□□□ 0.89
ATG9A-215ENST00000446716 SSR1P43307 286 aaKnown RBP20.63■□□□□ 0.89
ATG9A-215ENST00000446716 DDX21Q9NR30 783 aaKnown RBP eCLIP20.63■□□□□ 0.89
ATG9A-215ENST00000446716 SKIDA1Q1XH10 827 aa20.63■□□□□ 0.89
ATG9A-215ENST00000446716 FAM177A1Q8N128 213 aaPredicted RBP20.63■□□□□ 0.89
ATG9A-215ENST00000446716 CNNM2Q9H8M5 875 aa20.63■□□□□ 0.89
ATG9A-215ENST00000446716 ZNF397Q8NF99 534 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms