RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 KCNA6P17658 529 aa16.94■□□□□ 0.3
ERCC3-203ENST00000445889 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
ERCC3-203ENST00000445889 SASH1O94885 1247 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 HMGN5P82970 282 aaKnown RBP16.93■□□□□ 0.3
ERCC3-203ENST00000445889 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 RIOK3O14730 519 aaKnown RBP16.93■□□□□ 0.3
ERCC3-203ENST00000445889 JAK2O60674 1132 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 IGSF3O75054 1194 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
ERCC3-203ENST00000445889 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 BCL2L12Q9HB09 334 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 SLC27A2O14975 620 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 KIAA1524Q8TCG1 905 aa16.93■□□□□ 0.3
ERCC3-203ENST00000445889 BICC1Q9H694 974 aaKnown RBP16.93■□□□□ 0.3
ERCC3-203ENST00000445889 ATP2B3Q16720 1220 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 ANO6Q4KMQ2 910 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 CCDC186Q7Z3E2 898 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 TYRO3Q06418 890 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 NUP62CLQ9H1M0 184 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 MRVI1Q9Y6F6 885 aa16.92■□□□□ 0.3
ERCC3-203ENST00000445889 KRT85P78386 507 aa16.91■□□□□ 0.3
ERCC3-203ENST00000445889 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
ERCC3-203ENST00000445889 MYL6BP14649 208 aa16.91■□□□□ 0.3
ERCC3-203ENST00000445889 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
ERCC3-203ENST00000445889 KAZALD1Q96I82 304 aa16.91■□□□□ 0.3
ERCC3-203ENST00000445889 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
ERCC3-203ENST00000445889 NAA30Q147X3 362 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-203ENST00000445889 MAP3K11Q16584 847 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 TNMDQ9H2S6 317 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 NR1I2O75469 434 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.3
ERCC3-203ENST00000445889 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 SPTLC3Q9NUV7 552 aa16.9■□□□□ 0.3
ERCC3-203ENST00000445889 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
ERCC3-203ENST00000445889 SMAP1Q8IYB5 467 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-203ENST00000445889 SEC62Q99442 399 aaKnown RBP16.9■□□□□ 0.3
ERCC3-203ENST00000445889 ERCC4Q92889 916 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-203ENST00000445889 MAP4K1Q92918 833 aa16.89■□□□□ 0.29
ERCC3-203ENST00000445889 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
ERCC3-203ENST00000445889 ZSCAN31Q96LW9 406 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-203ENST00000445889 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
ERCC3-203ENST00000445889 DNAJC25Q9H1X3 360 aa16.89■□□□□ 0.29
ERCC3-203ENST00000445889 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
ERCC3-203ENST00000445889 SH2B1Q9NRF2 756 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-203ENST00000445889 BICD2Q8TD16 824 aa16.89■□□□□ 0.29
ERCC3-203ENST00000445889 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
ERCC3-203ENST00000445889 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-203ENST00000445889 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
ERCC3-203ENST00000445889 CHAF1AQ13111 956 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-203ENST00000445889 TOB2Q14106 344 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-203ENST00000445889 FAM200AQ8TCP9 573 aa16.88■□□□□ 0.29
ERCC3-203ENST00000445889 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.291e-7■□□□□ 8.7
ERCC3-203ENST00000445889 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
ERCC3-203ENST00000445889 ARID5BQ14865 1188 aa16.87■□□□□ 0.29
ERCC3-203ENST00000445889 EPHA10Q5JZY3 1008 aa16.87■□□□□ 0.29
ERCC3-203ENST00000445889 AGLP35573 1532 aa16.87■□□□□ 0.29
ERCC3-203ENST00000445889 GIGYF1O75420 1035 aaPredicted RBP16.86■□□□□ 0.29
ERCC3-203ENST00000445889 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.29
ERCC3-203ENST00000445889 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 PGBD1Q96JS3 809 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
ERCC3-203ENST00000445889 HSP90B1P14625 803 aaKnown RBP16.86■□□□□ 0.29
ERCC3-203ENST00000445889 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
ERCC3-203ENST00000445889 ZNF592Q92610 1267 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 GRM8O00222 908 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 PDCL2Q8N4E4 241 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
ERCC3-203ENST00000445889 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
ERCC3-203ENST00000445889 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
ERCC3-203ENST00000445889 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-203ENST00000445889 RPS6KB1P23443 525 aa16.85■□□□□ 0.29
ERCC3-203ENST00000445889 ESCO1Q5FWF5 840 aa16.85■□□□□ 0.29
ERCC3-203ENST00000445889 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
ERCC3-203ENST00000445889 IP6K1Q92551 441 aa16.85■□□□□ 0.29
ERCC3-203ENST00000445889 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
ERCC3-203ENST00000445889 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
ERCC3-203ENST00000445889 PSME1Q06323 249 aa16.84■□□□□ 0.29
ERCC3-203ENST00000445889 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
ERCC3-203ENST00000445889 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
ERCC3-203ENST00000445889 ZNF165P49910 485 aa16.84■□□□□ 0.29
ERCC3-203ENST00000445889 GUCY1B3Q02153 619 aa16.84■□□□□ 0.29
ERCC3-203ENST00000445889 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
ERCC3-203ENST00000445889 BRF1Q92994 677 aa16.84■□□□□ 0.29
ERCC3-203ENST00000445889 RNMTO43148 476 aaKnown RBP16.83■□□□□ 0.29
ERCC3-203ENST00000445889 PSMA5P28066 241 aa16.83■□□□□ 0.29
ERCC3-203ENST00000445889 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.29
ERCC3-203ENST00000445889 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms