RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 NEFLP07196 543 aa6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 VAMP1P23763 118 aa6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 MAPK8P45983 427 aa6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 TYRO3Q06418 890 aa6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 GPAMQ9HCL2 828 aa6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-211ENST00000445855 ST8SIA5O15466 376 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 PRPF40AO75400 957 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 ATP2B2Q01814 1243 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 C8orf34Q49A92 452 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 EFHC2Q5JST6 749 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 GAS2L1Q99501 681 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 NIF3L1Q9GZT8 377 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 GGNBP2Q9H3C7 697 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 RUBCNLQ9H714 662 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 KIAA1522Q9P206 1035 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 RTCBQ9Y3I0 505 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-211ENST00000445855 SENP3-EIF4A1A0A087X0R7 540 aa6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 TAGLNQ01995 201 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 ENOX2Q16206 610 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 PDE12Q6L8Q7 609 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 FIGNL1Q6PIW4 674 aa6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 XKR5Q6UX68 686 aa6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 KIFC2Q96AC6 838 aa6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 CEP63Q96MT8 703 aa6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 SENP2Q9HC62 589 aa6.7□□□□□ -1.34
R3HDM1-211ENST00000445855 ITGAEP38570 1179 aa6.69□□□□□ -1.34
R3HDM1-211ENST00000445855 CMTR1Q8N1G2 835 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-211ENST00000445855 CSRNP1Q96S65 589 aa6.69□□□□□ -1.34
R3HDM1-211ENST00000445855 DNAJC25Q9H1X3 360 aa6.69□□□□□ -1.34
R3HDM1-211ENST00000445855 KCNMB2Q9Y691 235 aa6.69□□□□□ -1.34
R3HDM1-211ENST00000445855 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 SLC35F4A4IF30 521 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 UBAP1LF5GYI3 381 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 H7C1W4 665 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 FAM157BP0CG42 384 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 PTSQ03393 145 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 TRIP4Q15650 581 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 ALG1LQ6GMV1 187 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 FBF1Q8TES7 1133 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 BRD7Q9NPI1 651 aa6.68□□□□□ -1.34
R3HDM1-211ENST00000445855 A6NHS1 94 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 EGFRP00533 1210 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 KCNQ4P56696 695 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 XPCQ01831 940 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 RIPOR1Q6ZS17 1223 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 ZNF438Q7Z4V0 828 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 SNX29Q8TEQ0 813 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 ZCCHC2Q9C0B9 1178 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 DACH1Q9UI36 760 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
R3HDM1-211ENST00000445855 SOBPA7XYQ1 873 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 EIF1AYO14602 144 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 ATXN7O15265 892 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 CPNE3O75131 537 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 XYLBO75191 536 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 TNFRSF21O75509 655 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 ORC1Q13415 861 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 TRIM47Q96LD4 638 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 DUSP9Q99956 384 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 IRX2Q9BZI1 471 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 NUCKS1Q9H1E3 243 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 IGSF5Q9NSI5 407 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 WWC3Q9ULE0 1092 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 PCDHGC4Q9Y5F7 938 aa6.66□□□□□ -1.34
R3HDM1-211ENST00000445855 EFSO43281 561 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 THBS1P07996 1170 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 LAMC2Q13753 1193 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 MRPL58Q14197 206 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 TMC4Q7Z404 712 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 CCDC155Q8N6L0 562 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 FRMD6Q96NE9 622 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 ELP3Q9H9T3 547 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 KCNH4Q9UQ05 1017 aa6.65□□□□□ -1.34
R3HDM1-211ENST00000445855 PHACTR2O75167 634 aa6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 DAB2P98082 770 aa6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 UBAP2LQ14157 1087 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 NLRP13Q86W25 1043 aa6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 TRIM22Q8IYM9 498 aa6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 CFHR5Q9BXR6 569 aa6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 FOXD3Q9UJU5 478 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-211ENST00000445855 SORBS3O60504 671 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 RECKO95980 971 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 GNA15P30679 374 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 TNP2Q05952 138 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 PSMD2Q13200 908 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 SETDB2Q96T68 719 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 EFCC1Q9HA90 598 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 ZFYVE28Q9HCC9 887 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 ABI2Q9NYB9 513 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
R3HDM1-211ENST00000445855 DCDC2BA2VCK2 349 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 KHNYNO15037 678 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms