RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 DBF4Q9UBU7 674 aaPredicted RBP24.44■■□□□ 1.5
COMMD1-204ENST00000445644 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
COMMD1-204ENST00000445644 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
COMMD1-204ENST00000445644 WDR90Q96KV7 1748 aa24.43■■□□□ 1.5
COMMD1-204ENST00000445644 TAF1P21675 1872 aa24.43■■□□□ 1.5
COMMD1-204ENST00000445644 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
COMMD1-204ENST00000445644 TCIRG1Q13488 830 aa24.42■■□□□ 1.5
COMMD1-204ENST00000445644 SLC51AQ86UW1 340 aa24.42■■□□□ 1.5
COMMD1-204ENST00000445644 NLRP10Q86W26 655 aa24.42■■□□□ 1.5
COMMD1-204ENST00000445644 WWC1Q8IX03 1113 aa24.42■■□□□ 1.5
COMMD1-204ENST00000445644 TAOK3Q9H2K8 898 aa24.42■■□□□ 1.5
COMMD1-204ENST00000445644 KDM2BQ8NHM5 1336 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 HOXA10P31260 410 aaPredicted RBP24.4■■□□□ 1.5
COMMD1-204ENST00000445644 CCDC93Q567U6 631 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 HSP90AB3PQ58FF7 597 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 SOGA3Q5TF21 947 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 SYNE4Q8N205 404 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 TSPYL6Q8N831 410 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 PLBD2Q8NHP8 589 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
COMMD1-204ENST00000445644 UTP14AQ9BVJ6 771 aaKnown RBP24.4■■□□□ 1.5
COMMD1-204ENST00000445644 CEP350Q5VT06 3117 aa24.4■■□□□ 1.5
COMMD1-204ENST00000445644 ALDH1B1P30837 517 aa24.39■■□□□ 1.49
COMMD1-204ENST00000445644 SLC10A5Q5PT55 438 aa24.39■■□□□ 1.49
COMMD1-204ENST00000445644 PHAXQ9H814 394 aaKnown RBP24.39■■□□□ 1.49
COMMD1-204ENST00000445644 RRAGCQ9HB90 399 aa24.39■■□□□ 1.49
COMMD1-204ENST00000445644 HYPKQ9NX55 129 aa24.39■■□□□ 1.49
COMMD1-204ENST00000445644 GLTPD2A6NH11 291 aa24.38■■□□□ 1.49
COMMD1-204ENST00000445644 ANKRD13DQ6ZTN6 518 aa24.38■■□□□ 1.49
COMMD1-204ENST00000445644 ZNF428Q96B54 188 aa24.38■■□□□ 1.49
COMMD1-204ENST00000445644 TOMM70O94826 608 aa24.37■■□□□ 1.49
COMMD1-204ENST00000445644 ISCA1Q9BUE6 129 aa24.37■■□□□ 1.49
COMMD1-204ENST00000445644 RNF123Q5XPI4 1314 aa24.36■■□□□ 1.49
COMMD1-204ENST00000445644 FKBP4Q02790 459 aaKnown RBP eCLIP24.36■■□□□ 1.49
COMMD1-204ENST00000445644 NCBP3Q53F19 620 aaKnown RBP24.36■■□□□ 1.49
COMMD1-204ENST00000445644 RPGRQ92834 1020 aaKnown RBP24.36■■□□□ 1.49
COMMD1-204ENST00000445644 COL4A1P02462 1669 aa24.36■■□□□ 1.49
COMMD1-204ENST00000445644 COL4A5P29400 1685 aa24.36■■□□□ 1.49
COMMD1-204ENST00000445644 POTECB2RU33 542 aa24.34■■□□□ 1.49
COMMD1-204ENST00000445644 HCLS1P14317 486 aaPredicted RBP24.34■■□□□ 1.49
COMMD1-204ENST00000445644 NLRP3Q96P20 1036 aa24.34■■□□□ 1.49
COMMD1-204ENST00000445644 CRAMP1Q96RY5 1269 aa24.34■■□□□ 1.49
COMMD1-204ENST00000445644 TRMT112Q9UI30 125 aaKnown RBP24.34■■□□□ 1.49
COMMD1-204ENST00000445644 ATP5J2-PTCD1G3V325 749 aa24.33■■□□□ 1.49
COMMD1-204ENST00000445644 HSPA6P17066 643 aa24.33■■□□□ 1.49
COMMD1-204ENST00000445644 RBM17Q96I25 401 aaKnown RBP24.33■■□□□ 1.49
COMMD1-204ENST00000445644 ZNF277Q9NRM2 450 aaPredicted RBP24.33■■□□□ 1.49
COMMD1-204ENST00000445644 IL16Q14005 1332 aa24.33■■□□□ 1.48
COMMD1-204ENST00000445644 LRRC37AA6NMS7 1700 aa24.32■■□□□ 1.48
COMMD1-204ENST00000445644 RTKN2Q8IZC4 609 aa24.32■■□□□ 1.48
COMMD1-204ENST00000445644 SALL2Q9Y467 1007 aaPredicted RBP24.32■■□□□ 1.48
COMMD1-204ENST00000445644 ABCC4O15439 1325 aa24.32■■□□□ 1.48
COMMD1-204ENST00000445644 SH3TC1Q8TE82 1336 aa24.32■■□□□ 1.48
COMMD1-204ENST00000445644 RBM46Q8TBY0 533 aaKnown RBP24.31■■□□□ 1.48
COMMD1-204ENST00000445644 PPEF1O14829 653 aaPredicted RBP24.3■■□□□ 1.48
COMMD1-204ENST00000445644 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
COMMD1-204ENST00000445644 FAM9BQ8IZU0 186 aa24.29■■□□□ 1.48
COMMD1-204ENST00000445644 FAM89AQ96GI7 184 aa24.29■■□□□ 1.48
COMMD1-204ENST00000445644 PSMD1Q99460 953 aa24.29■■□□□ 1.48
COMMD1-204ENST00000445644 FANCIQ9NVI1 1328 aa24.29■■□□□ 1.48
COMMD1-204ENST00000445644 SCN4AP35499 1836 aa24.28■■□□□ 1.48
COMMD1-204ENST00000445644 TCERG1O14776 1098 aaKnown RBP24.28■■□□□ 1.48
COMMD1-204ENST00000445644 DDNO94850 711 aaPredicted RBP24.28■■□□□ 1.48
COMMD1-204ENST00000445644 IARSP41252 1262 aaKnown RBP24.28■■□□□ 1.48
COMMD1-204ENST00000445644 TRIM28Q13263 835 aaKnown RBP24.28■■□□□ 1.48
COMMD1-204ENST00000445644 RIC3Q7Z5B4 369 aa24.28■■□□□ 1.48
COMMD1-204ENST00000445644 CACNA1FO60840 1977 aa24.28■■□□□ 1.48
COMMD1-204ENST00000445644 VEGFAP15692 232 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-204ENST00000445644 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
COMMD1-204ENST00000445644 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-204ENST00000445644 C16orf71Q8IYS4 520 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-204ENST00000445644 SPINK5Q9NQ38 1064 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-204ENST00000445644 ZNF541Q9H0D2 1346 aa24.27■■□□□ 1.48
COMMD1-204ENST00000445644 DUOX1Q9NRD9 1551 aa24.26■■□□□ 1.47
COMMD1-204ENST00000445644 CC2D2BQ6DHV5 1058 aa24.26■■□□□ 1.47
COMMD1-204ENST00000445644 DPY19L2Q6NUT2 758 aa24.26■■□□□ 1.47
COMMD1-204ENST00000445644 WDR63Q8IWG1 891 aa24.26■■□□□ 1.47
COMMD1-204ENST00000445644 MYD88Q99836 296 aa24.26■■□□□ 1.47
COMMD1-204ENST00000445644 RTL5Q5HYW3 569 aaPredicted RBP24.25■■□□□ 1.47
COMMD1-204ENST00000445644 ATP6V0A2Q9Y487 856 aa24.25■■□□□ 1.47
COMMD1-204ENST00000445644 LTBP1Q14766 1721 aa24.24■■□□□ 1.47
COMMD1-204ENST00000445644 G2E3Q7L622 706 aa24.24■■□□□ 1.47
COMMD1-204ENST00000445644 FZD9O00144 591 aa24.23■■□□□ 1.47
COMMD1-204ENST00000445644 METTL22Q9BUU2 404 aaPredicted RBP24.23■■□□□ 1.47
COMMD1-204ENST00000445644 MYH3P11055 1940 aa24.23■■□□□ 1.47
COMMD1-204ENST00000445644 FSTL1Q12841 308 aa24.22■■□□□ 1.47
COMMD1-204ENST00000445644 GRAPQ13588 217 aa24.22■■□□□ 1.47
COMMD1-204ENST00000445644 GRAPLQ8TC17 118 aaPredicted RBP24.22■■□□□ 1.47
COMMD1-204ENST00000445644 MAP3K2Q9Y2U5 619 aa24.22■■□□□ 1.47
COMMD1-204ENST00000445644 ADAMTSL1Q8N6G6 1762 aa24.21■■□□□ 1.47
COMMD1-204ENST00000445644 SF3B3Q15393 1217 aaKnown RBP24.21■■□□□ 1.47
COMMD1-204ENST00000445644 DDX46Q7L014 1031 aaKnown RBP24.21■■□□□ 1.47
COMMD1-204ENST00000445644 IRS4O14654 1257 aaPredicted RBP24.2■■□□□ 1.46
COMMD1-204ENST00000445644 BBOX1O75936 387 aa24.2■■□□□ 1.46
COMMD1-204ENST00000445644 EXOSC9Q06265 439 aaKnown RBP24.2■■□□□ 1.46
COMMD1-204ENST00000445644 GRIPAP1Q4V328 841 aa24.2■■□□□ 1.46
COMMD1-204ENST00000445644 ZBTB38Q8NAP3 1195 aaPredicted RBP24.2■■□□□ 1.46
COMMD1-204ENST00000445644 L3MBTL3Q96JM7 780 aaPredicted RBP24.2■■□□□ 1.46
COMMD1-204ENST00000445644 CHMP4AQ9BY43 222 aa24.2■■□□□ 1.46
COMMD1-204ENST00000445644 PI4KAP2A4QPH2 592 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms