RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 DNAJC10Q8IXB1 793 aa20.35■□□□□ 0.85
LAPTM4B-201ENST00000445593 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
LAPTM4B-201ENST00000445593 TTC41PQ6P2S7 1318 aa20.35■□□□□ 0.85
LAPTM4B-201ENST00000445593 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
LAPTM4B-201ENST00000445593 NEUROD6Q96NK8 337 aa20.34■□□□□ 0.85
LAPTM4B-201ENST00000445593 UTYO14607 1347 aa20.34■□□□□ 0.85
LAPTM4B-201ENST00000445593 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
LAPTM4B-201ENST00000445593 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.85
LAPTM4B-201ENST00000445593 ERVV-2B6SEH9 535 aa20.33■□□□□ 0.85
LAPTM4B-201ENST00000445593 LSG1Q9H089 658 aaKnown RBP20.33■□□□□ 0.85
LAPTM4B-201ENST00000445593 BAG4O95429 457 aaKnown RBP20.33■□□□□ 0.84
LAPTM4B-201ENST00000445593 NMIQ13287 307 aaPredicted RBP20.33■□□□□ 0.84
LAPTM4B-201ENST00000445593 PIGBQ92521 554 aa20.33■□□□□ 0.84
LAPTM4B-201ENST00000445593 NUTM2BA6NNL0 878 aaPredicted RBP20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 NUTM2EB1AL46 878 aaPredicted RBP20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 GPTP24298 496 aa20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 DBNDD2Q9BQY9 259 aa20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 SNX14Q9Y5W7 946 aa20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 RAD50Q92878 1312 aa20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 HSPA4P34932 840 aa20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 DBNLQ9UJU6 430 aaKnown RBP20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 TCEANC2Q96MN5 208 aa20.32■□□□□ 0.84
LAPTM4B-201ENST00000445593 CASTP20810 708 aaKnown RBP20.31■□□□□ 0.84
LAPTM4B-201ENST00000445593 CWC25Q9NXE8 425 aaPredicted RBP20.31■□□□□ 0.84
LAPTM4B-201ENST00000445593 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
LAPTM4B-201ENST00000445593 A0A0D9SFI3 127 aa20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 SLFNL1Q499Z3 407 aa20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 EVI5LQ96CN4 794 aa20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 TIMM10P62072 90 aa20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 COL9A3Q14050 684 aaPredicted RBP20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 DDX46Q7L014 1031 aaKnown RBP20.3■□□□□ 0.84
LAPTM4B-201ENST00000445593 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 PANK2Q9BZ23 570 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 GOLGA6L3A6NEY3 463 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 GOLGA6L22H0YM25 854 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 PIP4K2BP78356 416 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 TNNI3KQ59H18 835 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 FPGT-TNNI3KV9GXZ4 949 aa20.29■□□□□ 0.84
LAPTM4B-201ENST00000445593 ZDHHC9Q9Y397 364 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 FAM177BA6PVY3 158 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 MRC1P22897 1456 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 NUCB2P80303 420 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 ACSBG1Q96GR2 724 aa20.28■□□□□ 0.84
LAPTM4B-201ENST00000445593 AK2P54819 239 aa20.27■□□□□ 0.84
LAPTM4B-201ENST00000445593 CCDC129Q6ZRS4 1044 aa20.27■□□□□ 0.84
LAPTM4B-201ENST00000445593 PUS3Q9BZE2 481 aaKnown RBP20.27■□□□□ 0.84
LAPTM4B-201ENST00000445593 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.84
LAPTM4B-201ENST00000445593 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.84
LAPTM4B-201ENST00000445593 ANAPC15P60006 121 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 ZNF589Q86UQ0 364 aaPredicted RBP20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 SEC62Q99442 399 aaKnown RBP20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 TAF6LQ9Y6J9 622 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 TUBGCP6Q96RT7 1819 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 PKD1L3Q7Z443 1732 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 ATG3Q9NT62 314 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 RBM8AQ9Y5S9 174 aaKnown RBP20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 CASP7P55210 303 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 FOXO4P98177 505 aa20.26■□□□□ 0.83
LAPTM4B-201ENST00000445593 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
LAPTM4B-201ENST00000445593 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
LAPTM4B-201ENST00000445593 H7C1W4 665 aa20.24■□□□□ 0.83
LAPTM4B-201ENST00000445593 LARGE1O95461 756 aa20.24■□□□□ 0.83
LAPTM4B-201ENST00000445593 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
LAPTM4B-201ENST00000445593 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
LAPTM4B-201ENST00000445593 TBC1D2BQ9UPU7 963 aa20.24■□□□□ 0.83
LAPTM4B-201ENST00000445593 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
LAPTM4B-201ENST00000445593 HLFQ16534 295 aa20.23■□□□□ 0.83
LAPTM4B-201ENST00000445593 RABL6Q3YEC7 729 aaPredicted RBP20.23■□□□□ 0.83
LAPTM4B-201ENST00000445593 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
LAPTM4B-201ENST00000445593 EXOC5O00471 708 aa20.23■□□□□ 0.83
LAPTM4B-201ENST00000445593 XRCC6P12956 609 aaKnown RBP eCLIP20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 CAVIN1Q6NZI2 390 aaKnown RBP20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 KIF6Q6ZMV9 814 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 GOLIM4O00461 696 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 RUFY3Q7L099 469 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 TAF7LQ5H9L4 462 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 CCDC83Q8IWF9 413 aa20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
LAPTM4B-201ENST00000445593 MCM2P49736 904 aa20.21■□□□□ 0.83
LAPTM4B-201ENST00000445593 NECAB1Q8N987 351 aa20.21■□□□□ 0.83
LAPTM4B-201ENST00000445593 SLC4A9Q96Q91 983 aa20.21■□□□□ 0.83
LAPTM4B-201ENST00000445593 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
LAPTM4B-201ENST00000445593 CYP2E1P05181 493 aaPredicted RBP20.21■□□□□ 0.83
LAPTM4B-201ENST00000445593 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
LAPTM4B-201ENST00000445593 KCPQ6ZWJ8 1503 aa20.2■□□□□ 0.82
LAPTM4B-201ENST00000445593 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
LAPTM4B-201ENST00000445593 STARD3NLO95772 234 aa20.2■□□□□ 0.82
LAPTM4B-201ENST00000445593 PDRG1Q9NUG6 133 aa20.2■□□□□ 0.82
LAPTM4B-201ENST00000445593 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms