RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 STYK1Q6J9G0 422 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 ISCA1Q9BUE6 129 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
GARNL3-208ENST00000444677 PRELPP51888 382 aa17.43■□□□□ 0.38
GARNL3-208ENST00000444677 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
GARNL3-208ENST00000444677 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
GARNL3-208ENST00000444677 NPR1P16066 1061 aa17.42■□□□□ 0.38
GARNL3-208ENST00000444677 PRPF40BQ6NWY9 871 aaKnown RBP17.42■□□□□ 0.38
GARNL3-208ENST00000444677 ZNF526Q8TF50 670 aaPredicted RBP17.42■□□□□ 0.38
GARNL3-208ENST00000444677 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
GARNL3-208ENST00000444677 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
GARNL3-208ENST00000444677 MYD88Q99836 296 aa17.42■□□□□ 0.38
GARNL3-208ENST00000444677 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
GARNL3-208ENST00000444677 TRMT112Q9UI30 125 aaKnown RBP17.42■□□□□ 0.38
GARNL3-208ENST00000444677 IBTKQ9P2D0 1353 aaPredicted RBP17.41■□□□□ 0.38
GARNL3-208ENST00000444677 SLC10A5Q5PT55 438 aa17.41■□□□□ 0.38
GARNL3-208ENST00000444677 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
GARNL3-208ENST00000444677 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
GARNL3-208ENST00000444677 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
GARNL3-208ENST00000444677 STK31Q9BXU1 1019 aa17.41■□□□□ 0.38
GARNL3-208ENST00000444677 SBF1O95248 1867 aa17.4■□□□□ 0.38
GARNL3-208ENST00000444677 NFKBIEO00221 500 aa17.4■□□□□ 0.38
GARNL3-208ENST00000444677 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
GARNL3-208ENST00000444677 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
GARNL3-208ENST00000444677 C7orf43Q8WVR3 580 aa17.4■□□□□ 0.38
GARNL3-208ENST00000444677 JARID2Q92833 1246 aaPredicted RBP17.4■□□□□ 0.38
GARNL3-208ENST00000444677 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
GARNL3-208ENST00000444677 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
GARNL3-208ENST00000444677 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
GARNL3-208ENST00000444677 CHMP4AQ9BY43 222 aa17.39■□□□□ 0.37
GARNL3-208ENST00000444677 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
GARNL3-208ENST00000444677 CCDC88AQ3V6T2 1871 aa17.39■□□□□ 0.37
GARNL3-208ENST00000444677 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
GARNL3-208ENST00000444677 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
GARNL3-208ENST00000444677 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
GARNL3-208ENST00000444677 METTL22Q9BUU2 404 aaPredicted RBP17.38■□□□□ 0.37
GARNL3-208ENST00000444677 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
GARNL3-208ENST00000444677 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
GARNL3-208ENST00000444677 C1QTNF8P60827 252 aa17.37■□□□□ 0.37
GARNL3-208ENST00000444677 FLIIQ13045 1269 aa17.37■□□□□ 0.37
GARNL3-208ENST00000444677 NLRP3Q96P20 1036 aa17.37■□□□□ 0.37
GARNL3-208ENST00000444677 GPBP1L1Q9HC44 474 aaPredicted RBP17.37■□□□□ 0.37
GARNL3-208ENST00000444677 TIAM2Q8IVF5 1701 aa17.37■□□□□ 0.37
GARNL3-208ENST00000444677 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
GARNL3-208ENST00000444677 E9PSI1 815 aa17.36■□□□□ 0.37
GARNL3-208ENST00000444677 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
GARNL3-208ENST00000444677 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
GARNL3-208ENST00000444677 RPGRQ92834 1020 aaKnown RBP17.36■□□□□ 0.37
GARNL3-208ENST00000444677 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
GARNL3-208ENST00000444677 NUP98P52948 1817 aa17.35■□□□□ 0.37
GARNL3-208ENST00000444677 ALDH1B1P30837 517 aa17.35■□□□□ 0.37
GARNL3-208ENST00000444677 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
GARNL3-208ENST00000444677 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
GARNL3-208ENST00000444677 TNRC6CQ9HCJ0 1690 aaKnown RBP17.35■□□□□ 0.37
GARNL3-208ENST00000444677 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
GARNL3-208ENST00000444677 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
GARNL3-208ENST00000444677 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
GARNL3-208ENST00000444677 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
GARNL3-208ENST00000444677 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
GARNL3-208ENST00000444677 TRMT2AQ8IZ69 625 aaKnown RBP17.33■□□□□ 0.36
GARNL3-208ENST00000444677 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
GARNL3-208ENST00000444677 F6X3S4 739 aa17.32■□□□□ 0.36
GARNL3-208ENST00000444677 LMNB1P20700 586 aa17.32■□□□□ 0.36
GARNL3-208ENST00000444677 CCDC93Q567U6 631 aa17.32■□□□□ 0.36
GARNL3-208ENST00000444677 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
GARNL3-208ENST00000444677 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
GARNL3-208ENST00000444677 ABCC4O15439 1325 aa17.31■□□□□ 0.36
GARNL3-208ENST00000444677 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
GARNL3-208ENST00000444677 DNAAF4Q8WXU2 420 aa17.31■□□□□ 0.36
GARNL3-208ENST00000444677 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
GARNL3-208ENST00000444677 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
GARNL3-208ENST00000444677 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
GARNL3-208ENST00000444677 TAOK3Q9H2K8 898 aa17.3■□□□□ 0.36
GARNL3-208ENST00000444677 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
GARNL3-208ENST00000444677 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
GARNL3-208ENST00000444677 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
GARNL3-208ENST00000444677 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
GARNL3-208ENST00000444677 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
GARNL3-208ENST00000444677 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
GARNL3-208ENST00000444677 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
GARNL3-208ENST00000444677 LTBP3Q9NS15 1303 aa17.28■□□□□ 0.36
GARNL3-208ENST00000444677 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
GARNL3-208ENST00000444677 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
GARNL3-208ENST00000444677 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
GARNL3-208ENST00000444677 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
GARNL3-208ENST00000444677 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
GARNL3-208ENST00000444677 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
GARNL3-208ENST00000444677 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
GARNL3-208ENST00000444677 GRAPQ13588 217 aa17.27■□□□□ 0.36
GARNL3-208ENST00000444677 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
GARNL3-208ENST00000444677 GRAPLQ8TC17 118 aaPredicted RBP17.27■□□□□ 0.36
GARNL3-208ENST00000444677 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.36
GARNL3-208ENST00000444677 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.36
GARNL3-208ENST00000444677 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.35
GARNL3-208ENST00000444677 H7C1W4 665 aa17.26■□□□□ 0.35
GARNL3-208ENST00000444677 BBOX1O75936 387 aa17.26■□□□□ 0.35
GARNL3-208ENST00000444677 GCKRQ14397 625 aa17.26■□□□□ 0.35
GARNL3-208ENST00000444677 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms