RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 STARD3NLO95772 234 aa14.2□□□□□ -0.14
HDAC8-215ENST00000444609 GMPSP49915 693 aaPredicted RBP14.2□□□□□ -0.14
HDAC8-215ENST00000444609 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
HDAC8-215ENST00000444609 SLC52A2Q9HAB3 445 aa14.2□□□□□ -0.14
HDAC8-215ENST00000444609 SCN11AQ9UI33 1791 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 H0YGN5 161 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 GPR25O00155 361 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 NBPF5PQ86XG9 351 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-215ENST00000444609 NIM1KQ8IY84 436 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 TESK2Q96S53 571 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
HDAC8-215ENST00000444609 EN2P19622 333 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-215ENST00000444609 CXCL9Q07325 125 aa14.18□□□□□ -0.14
HDAC8-215ENST00000444609 TRPM4Q8TD43 1214 aa14.18□□□□□ -0.14
HDAC8-215ENST00000444609 NPC1L1Q9UHC9 1359 aa14.18□□□□□ -0.14
HDAC8-215ENST00000444609 GRIPAP1Q4V328 841 aa14.17□□□□□ -0.14
HDAC8-215ENST00000444609 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
HDAC8-215ENST00000444609 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
HDAC8-215ENST00000444609 IL6STP40189 918 aaPredicted RBP14.16□□□□□ -0.14
HDAC8-215ENST00000444609 RBM27Q9P2N5 1060 aaKnown RBP14.16□□□□□ -0.14
HDAC8-215ENST00000444609 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
HDAC8-215ENST00000444609 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
HDAC8-215ENST00000444609 KRT26Q7Z3Y9 468 aa14.15□□□□□ -0.14
HDAC8-215ENST00000444609 RASAL3Q86YV0 1011 aa14.15□□□□□ -0.14
HDAC8-215ENST00000444609 COL25A1Q9BXS0 654 aaPredicted RBP14.15□□□□□ -0.14
HDAC8-215ENST00000444609 LGR6Q9HBX8 967 aa14.15□□□□□ -0.14
HDAC8-215ENST00000444609 ZNRF3Q9ULT6 936 aa14.15□□□□□ -0.14
HDAC8-215ENST00000444609 AKAP11Q9UKA4 1901 aa14.14□□□□□ -0.15
HDAC8-215ENST00000444609 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
HDAC8-215ENST00000444609 FKTNO75072 461 aa14.14□□□□□ -0.15
HDAC8-215ENST00000444609 ANKRD26Q9UPS8 1709 aa14.13□□□□□ -0.15
HDAC8-215ENST00000444609 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
HDAC8-215ENST00000444609 BCL2L13Q9BXK5 485 aa14.13□□□□□ -0.15
HDAC8-215ENST00000444609 CARD14Q9BXL6 1004 aa14.13□□□□□ -0.15
HDAC8-215ENST00000444609 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
HDAC8-215ENST00000444609 CNOT7Q9UIV1 285 aaKnown RBP14.13□□□□□ -0.15
HDAC8-215ENST00000444609 SCN7AQ01118 1682 aa14.12□□□□□ -0.15
HDAC8-215ENST00000444609 H7C1D1 291 aa14.12□□□□□ -0.15
HDAC8-215ENST00000444609 AOC3Q16853 763 aa14.12□□□□□ -0.15
HDAC8-215ENST00000444609 CLEC4GQ6UXB4 293 aa14.12□□□□□ -0.15
HDAC8-215ENST00000444609 SHTN1A0MZ66 631 aa14.11□□□□□ -0.15
HDAC8-215ENST00000444609 ADM5C9JUS6 153 aa14.11□□□□□ -0.15
HDAC8-215ENST00000444609 TM4SF4P48230 202 aa14.11□□□□□ -0.15
HDAC8-215ENST00000444609 CRY2Q49AN0 593 aa14.11□□□□□ -0.15
HDAC8-215ENST00000444609 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
HDAC8-215ENST00000444609 AEBP1Q8IUX7 1158 aa14.11□□□□□ -0.15
HDAC8-215ENST00000444609 DZIP3Q86Y13 1208 aaKnown RBP14.1□□□□□ -0.15
HDAC8-215ENST00000444609 ARMC5Q96C12 935 aa14.1□□□□□ -0.15
HDAC8-215ENST00000444609 CFHR5Q9BXR6 569 aa14.1□□□□□ -0.15
HDAC8-215ENST00000444609 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
HDAC8-215ENST00000444609 TRIM17Q9Y577 477 aa14.1□□□□□ -0.15
HDAC8-215ENST00000444609 RANBP2P49792 3224 aaKnown RBP14.1□□□□□ -0.15
HDAC8-215ENST00000444609 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
HDAC8-215ENST00000444609 A1BGP04217 495 aa14.09□□□□□ -0.15
HDAC8-215ENST00000444609 TNIP1Q15025 636 aa14.09□□□□□ -0.15
HDAC8-215ENST00000444609 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
HDAC8-215ENST00000444609 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
HDAC8-215ENST00000444609 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
HDAC8-215ENST00000444609 PRO3102Q9H379 93 aa14.09□□□□□ -0.15
HDAC8-215ENST00000444609 R3HDMLQ9H3Y0 253 aa14.09□□□□□ -0.15
HDAC8-215ENST00000444609 HTTP42858 3142 aa14.08□□□□□ -0.15
HDAC8-215ENST00000444609 BRCA2P51587 3418 aa14.08□□□□□ -0.16
HDAC8-215ENST00000444609 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.16
HDAC8-215ENST00000444609 OTOP1Q7RTM1 612 aa14.08□□□□□ -0.16
HDAC8-215ENST00000444609 SAMD7Q7Z3H4 446 aa14.08□□□□□ -0.16
HDAC8-215ENST00000444609 SLC51AQ86UW1 340 aa14.08□□□□□ -0.16
HDAC8-215ENST00000444609 MRC1P22897 1456 aa14.07□□□□□ -0.16
HDAC8-215ENST00000444609 RAD17O75943 681 aa14.07□□□□□ -0.16
HDAC8-215ENST00000444609 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
HDAC8-215ENST00000444609 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
HDAC8-215ENST00000444609 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
HDAC8-215ENST00000444609 TTC5Q8N0Z6 440 aa14.06□□□□□ -0.16
HDAC8-215ENST00000444609 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
HDAC8-215ENST00000444609 NIP7Q9Y221 180 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC8-215ENST00000444609 PTPN22Q9Y2R2 807 aa14.06□□□□□ -0.16
HDAC8-215ENST00000444609 CEP290O15078 2479 aa14.06□□□□□ -0.16
HDAC8-215ENST00000444609 PAPPA2Q9BXP8 1791 aa14.06□□□□□ -0.16
HDAC8-215ENST00000444609 KIAA0100Q14667 2235 aaKnown RBP14.06□□□□□ -0.16
HDAC8-215ENST00000444609 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 TCERG1O14776 1098 aaKnown RBP14.05□□□□□ -0.16
HDAC8-215ENST00000444609 EGFRP00533 1210 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 GTF2E1P29083 439 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-215ENST00000444609 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-215ENST00000444609 FKBP1BP68106 108 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 TBC1D10BQ4KMP7 808 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-215ENST00000444609 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 DPF2Q92785 391 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 CDCA5Q96FF9 252 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 PRDM6Q9NQX0 595 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 KIF7Q2M1P5 1343 aa14.05□□□□□ -0.16
HDAC8-215ENST00000444609 SOX1O00570 391 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-215ENST00000444609 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-215ENST00000444609 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
HDAC8-215ENST00000444609 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-215ENST00000444609 HEG1Q9ULI3 1381 aa14.04□□□□□ -0.16
HDAC8-215ENST00000444609 CENPFP49454 3210 aa14.03□□□□□ -0.16
HDAC8-215ENST00000444609 RGL2O15211 777 aa14.03□□□□□ -0.16
HDAC8-215ENST00000444609 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
HDAC8-215ENST00000444609 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms