RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 DDX60Q8IY21 1712 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-206ENST00000443574 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
HLA-DQB1-206ENST00000443574 E9PSI1 815 aa13.28□□□□□ -0.28
HLA-DQB1-206ENST00000443574 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
HLA-DQB1-206ENST00000443574 ANKRD13DQ6ZTN6 518 aa13.28□□□□□ -0.28
HLA-DQB1-206ENST00000443574 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
HLA-DQB1-206ENST00000443574 CHRNA5P30532 468 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 EXOSC9Q06265 439 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 POLA2Q14181 598 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ZNF34Q8IZ26 560 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 TSPYL6Q8N831 410 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.29
HLA-DQB1-206ENST00000443574 YY1P25490 414 aa13.26□□□□□ -0.29
HLA-DQB1-206ENST00000443574 TCIRG1Q13488 830 aa13.26□□□□□ -0.29
HLA-DQB1-206ENST00000443574 FER1L6Q2WGJ9 1857 aa13.26□□□□□ -0.29
HLA-DQB1-206ENST00000443574 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SBF1O95248 1867 aa13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SLX4Q8IY92 1834 aa13.25□□□□□ -0.29
HLA-DQB1-206ENST00000443574 DICER1Q9UPY3 1922 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 NTSR2O95665 410 aa13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 NPR1P16066 1061 aa13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 KCNA3P22001 575 aa13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 TRMT112Q9UI30 125 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-206ENST00000443574 VAMP4O75379 141 aa13.22□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SRGNP10124 158 aa13.22□□□□□ -0.29
HLA-DQB1-206ENST00000443574 FLIIQ13045 1269 aa13.22□□□□□ -0.29
HLA-DQB1-206ENST00000443574 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ZNF428Q96B54 188 aa13.22□□□□□ -0.29
HLA-DQB1-206ENST00000443574 KLRG2A4D1S0 409 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 NLRP3Q96P20 1036 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 MYD88Q99836 296 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 MAP3K2Q9Y2U5 619 aa13.21□□□□□ -0.29
HLA-DQB1-206ENST00000443574 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 ADCY9O60503 1353 aa13.2□□□□□ -0.3
HLA-DQB1-206ENST00000443574 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
HLA-DQB1-206ENST00000443574 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
HLA-DQB1-206ENST00000443574 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-206ENST00000443574 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-206ENST00000443574 LRRC37AA6NMS7 1700 aa13.19□□□□□ -0.3
HLA-DQB1-206ENST00000443574 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
HLA-DQB1-206ENST00000443574 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
HLA-DQB1-206ENST00000443574 TAF1P21675 1872 aa13.17□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CCDC93Q567U6 631 aa13.17□□□□□ -0.3
HLA-DQB1-206ENST00000443574 G2E3Q7L622 706 aa13.17□□□□□ -0.3
HLA-DQB1-206ENST00000443574 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB1-206ENST00000443574 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
HLA-DQB1-206ENST00000443574 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 C21orf2O43822 256 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 TAOK3Q9H2K8 898 aa13.16□□□□□ -0.3
HLA-DQB1-206ENST00000443574 PTPRCP08575 1304 aa13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 LINS1Q8NG48 757 aa13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
HLA-DQB1-206ENST00000443574 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms