RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 TRIM28Q13263 835 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-212ENST00000443561 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
PDLIM2-212ENST00000443561 KSR2Q6VAB6 950 aa16.5■□□□□ 0.23
PDLIM2-212ENST00000443561 MYD88Q99836 296 aa16.5■□□□□ 0.23
PDLIM2-212ENST00000443561 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
PDLIM2-212ENST00000443561 F6X3S4 739 aa16.49■□□□□ 0.23
PDLIM2-212ENST00000443561 SRGNP10124 158 aa16.49■□□□□ 0.23
PDLIM2-212ENST00000443561 CRY2Q49AN0 593 aa16.49■□□□□ 0.23
PDLIM2-212ENST00000443561 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
PDLIM2-212ENST00000443561 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
PDLIM2-212ENST00000443561 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
PDLIM2-212ENST00000443561 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
PDLIM2-212ENST00000443561 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
PDLIM2-212ENST00000443561 TPTE2Q6XPS3 522 aa16.48■□□□□ 0.23
PDLIM2-212ENST00000443561 LRRC37AA6NMS7 1700 aa16.48■□□□□ 0.23
PDLIM2-212ENST00000443561 ST5P78524 1137 aa16.47■□□□□ 0.23
PDLIM2-212ENST00000443561 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-212ENST00000443561 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
PDLIM2-212ENST00000443561 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-212ENST00000443561 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
PDLIM2-212ENST00000443561 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-212ENST00000443561 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-212ENST00000443561 FAM89AQ96GI7 184 aa16.46■□□□□ 0.23
PDLIM2-212ENST00000443561 NYXQ9GZU5 481 aa16.46■□□□□ 0.23
PDLIM2-212ENST00000443561 SPEF2Q9C093 1822 aa16.46■□□□□ 0.23
PDLIM2-212ENST00000443561 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 PDE6BP35913 854 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 FKBP5Q13451 457 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 GPR162Q16538 588 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
PDLIM2-212ENST00000443561 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 PRELPP51888 382 aa16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 CASP7P55210 303 aa16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 PIM2Q9P1W9 311 aa16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
PDLIM2-212ENST00000443561 H0YIN7 160 aa16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 BRPF1P55201 1214 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 STYK1Q6J9G0 422 aa16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 CCDC191Q8NCU4 936 aa16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 C7orf43Q8WVR3 580 aa16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 TNNQ9UQP3 1299 aa16.43■□□□□ 0.22
PDLIM2-212ENST00000443561 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
PDLIM2-212ENST00000443561 A0A1B0GUL6 1792 aa16.42■□□□□ 0.22
PDLIM2-212ENST00000443561 PCCAP05165 728 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-212ENST00000443561 MASTLQ96GX5 879 aa16.42■□□□□ 0.22
PDLIM2-212ENST00000443561 DICER1Q9UPY3 1922 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-212ENST00000443561 NPHP1O15259 732 aa16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 NPR1P16066 1061 aa16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 ZNF622Q969S3 477 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 CWC25Q9NXE8 425 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 DUOX1Q9NRD9 1551 aa16.41■□□□□ 0.22
PDLIM2-212ENST00000443561 H7C1W4 665 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 NFKBIEO00221 500 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 BCAR3O75815 825 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 GCKRQ14397 625 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 COL4A5P29400 1685 aa16.4■□□□□ 0.22
PDLIM2-212ENST00000443561 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-212ENST00000443561 RASSF7Q02833 373 aa16.39■□□□□ 0.21
PDLIM2-212ENST00000443561 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
PDLIM2-212ENST00000443561 ABCC4O15439 1325 aa16.39■□□□□ 0.21
PDLIM2-212ENST00000443561 PTPRCP08575 1304 aa16.39■□□□□ 0.21
PDLIM2-212ENST00000443561 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-212ENST00000443561 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-212ENST00000443561 C21orf2O43822 256 aa16.37■□□□□ 0.21
PDLIM2-212ENST00000443561 UBE3BQ7Z3V4 1068 aa16.37■□□□□ 0.21
PDLIM2-212ENST00000443561 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-212ENST00000443561 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
PDLIM2-212ENST00000443561 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
PDLIM2-212ENST00000443561 EPHA10Q5JZY3 1008 aa16.36■□□□□ 0.21
PDLIM2-212ENST00000443561 CNKSR1Q969H4 720 aa16.36■□□□□ 0.21
PDLIM2-212ENST00000443561 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
PDLIM2-212ENST00000443561 NLRP3Q96P20 1036 aa16.36■□□□□ 0.21
PDLIM2-212ENST00000443561 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms