RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 DNAAF4Q8WXU2 420 aa15.72■□□□□ 0.11
USP1-203ENST00000442679 WWC3Q9ULE0 1092 aa15.72■□□□□ 0.11
USP1-203ENST00000442679 AFDNP55196 1824 aaKnown RBP15.72■□□□□ 0.11
USP1-203ENST00000442679 IBTKQ9P2D0 1353 aaPredicted RBP15.72■□□□□ 0.11
USP1-203ENST00000442679 RARSP54136 660 aaKnown RBP15.71■□□□□ 0.11
USP1-203ENST00000442679 GPR162Q16538 588 aa15.71■□□□□ 0.11
USP1-203ENST00000442679 CCDC191Q8NCU4 936 aa15.71■□□□□ 0.11
USP1-203ENST00000442679 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
USP1-203ENST00000442679 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
USP1-203ENST00000442679 F6X3S4 739 aa15.7■□□□□ 0.1
USP1-203ENST00000442679 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
USP1-203ENST00000442679 SLC10A5Q5PT55 438 aa15.7■□□□□ 0.1
USP1-203ENST00000442679 CWC25Q9NXE8 425 aaPredicted RBP15.7■□□□□ 0.1
USP1-203ENST00000442679 PIM2Q9P1W9 311 aa15.7■□□□□ 0.1
USP1-203ENST00000442679 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
USP1-203ENST00000442679 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
USP1-203ENST00000442679 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
USP1-203ENST00000442679 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
USP1-203ENST00000442679 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
USP1-203ENST00000442679 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.1
USP1-203ENST00000442679 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
USP1-203ENST00000442679 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
USP1-203ENST00000442679 PTPRCP08575 1304 aa15.68■□□□□ 0.1
USP1-203ENST00000442679 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
USP1-203ENST00000442679 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
USP1-203ENST00000442679 SRGNP10124 158 aa15.68■□□□□ 0.1
USP1-203ENST00000442679 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
USP1-203ENST00000442679 YBX3P16989 372 aaKnown RBP eCLIP15.68■□□□□ 0.16e-8■□□□□ 9.3
USP1-203ENST00000442679 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
USP1-203ENST00000442679 DALRD3Q5D0E6 543 aaKnown RBP15.68■□□□□ 0.1
USP1-203ENST00000442679 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
USP1-203ENST00000442679 LINS1Q8NG48 757 aa15.68■□□□□ 0.1
USP1-203ENST00000442679 NLRP3Q96P20 1036 aa15.68■□□□□ 0.1
USP1-203ENST00000442679 BRPF1P55201 1214 aaPredicted RBP15.67■□□□□ 0.1
USP1-203ENST00000442679 SLC4A10Q6U841 1118 aa15.67■□□□□ 0.1
USP1-203ENST00000442679 ZBTB38Q8NAP3 1195 aaPredicted RBP15.67■□□□□ 0.1
USP1-203ENST00000442679 MASTLQ96GX5 879 aa15.67■□□□□ 0.1
USP1-203ENST00000442679 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
USP1-203ENST00000442679 BCS1LQ9Y276 419 aa15.67■□□□□ 0.1
USP1-203ENST00000442679 PCCAP05165 728 aaPredicted RBP15.66■□□□□ 0.1
USP1-203ENST00000442679 NPR1P16066 1061 aa15.66■□□□□ 0.1
USP1-203ENST00000442679 BEND3Q5T5X7 828 aa15.66■□□□□ 0.1
USP1-203ENST00000442679 STYK1Q6J9G0 422 aa15.66■□□□□ 0.1
USP1-203ENST00000442679 C3orf67Q6ZVT6 689 aa15.66■□□□□ 0.1
USP1-203ENST00000442679 TTLL6Q8N841 843 aa15.66■□□□□ 0.1
USP1-203ENST00000442679 JARID2Q92833 1246 aaPredicted RBP15.66■□□□□ 0.1
USP1-203ENST00000442679 ANKRD36CQ5JPF3 1778 aa15.66■□□□□ 0.1
USP1-203ENST00000442679 KIAA1551Q9HCM1 1747 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
USP1-203ENST00000442679 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
USP1-203ENST00000442679 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 BCAR3O75815 825 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 GCKRQ14397 625 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 CRY2Q49AN0 593 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 RIC1Q4ADV7 1423 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 CACNA1FO60840 1977 aa15.65■□□□□ 0.1
USP1-203ENST00000442679 HSP90B1P14625 803 aaKnown RBP15.64■□□□□ 0.09
USP1-203ENST00000442679 ANKRD31Q8N7Z5 1873 aa15.64■□□□□ 0.09
USP1-203ENST00000442679 RPGRQ92834 1020 aaKnown RBP15.64■□□□□ 0.09
USP1-203ENST00000442679 CNKSR1Q969H4 720 aa15.64■□□□□ 0.09
USP1-203ENST00000442679 SRCIN1Q9C0H9 1055 aa15.64■□□□□ 0.09
USP1-203ENST00000442679 GOLGB1Q14789 3259 aaKnown RBP15.63■□□□□ 0.09
USP1-203ENST00000442679 H7C1W4 665 aa15.63■□□□□ 0.09
USP1-203ENST00000442679 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
USP1-203ENST00000442679 HOXA10P31260 410 aaPredicted RBP15.63■□□□□ 0.09
USP1-203ENST00000442679 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
USP1-203ENST00000442679 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
USP1-203ENST00000442679 KIF16BQ96L93 1317 aa15.63■□□□□ 0.09
USP1-203ENST00000442679 IPO8O15397 1037 aaKnown RBP15.62■□□□□ 0.09
USP1-203ENST00000442679 ALDH1L1O75891 902 aa15.62■□□□□ 0.09
USP1-203ENST00000442679 UBE3BQ7Z3V4 1068 aa15.62■□□□□ 0.09
USP1-203ENST00000442679 ARHGAP45Q92619 1136 aa15.62■□□□□ 0.09
USP1-203ENST00000442679 FRAT1Q92837 279 aaPredicted RBP15.62■□□□□ 0.09
USP1-203ENST00000442679 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
USP1-203ENST00000442679 PDE8AO60658 829 aa15.61■□□□□ 0.09
USP1-203ENST00000442679 PRPF40BQ6NWY9 871 aaKnown RBP15.61■□□□□ 0.09
USP1-203ENST00000442679 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
USP1-203ENST00000442679 UTRNP46939 3433 aa15.61■□□□□ 0.09
USP1-203ENST00000442679 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
USP1-203ENST00000442679 SF3B3Q15393 1217 aaKnown RBP15.6■□□□□ 0.09
USP1-203ENST00000442679 ARHGAP27Q6ZUM4 889 aa15.6■□□□□ 0.09
USP1-203ENST00000442679 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
USP1-203ENST00000442679 CRAMP1Q96RY5 1269 aa15.6■□□□□ 0.09
USP1-203ENST00000442679 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
USP1-203ENST00000442679 COL11A2P13942 1736 aaPredicted RBP15.6■□□□□ 0.09
USP1-203ENST00000442679 GRM8O00222 908 aa15.59■□□□□ 0.09
USP1-203ENST00000442679 C21orf2O43822 256 aa15.59■□□□□ 0.09
USP1-203ENST00000442679 CCT4P50991 539 aaKnown RBP15.59■□□□□ 0.09
USP1-203ENST00000442679 CASP7P55210 303 aa15.59■□□□□ 0.09
USP1-203ENST00000442679 ZKSCAN2Q63HK3 967 aa15.58■□□□□ 0.08
USP1-203ENST00000442679 ATF7IPQ6VMQ6 1270 aa15.58■□□□□ 0.08
USP1-203ENST00000442679 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
USP1-203ENST00000442679 DLEC1Q9Y238 1755 aa15.57■□□□□ 0.08
USP1-203ENST00000442679 TRIM27P14373 513 aa15.57■□□□□ 0.08
USP1-203ENST00000442679 CCDC152Q4G0S7 254 aa15.57■□□□□ 0.08
USP1-203ENST00000442679 C7orf43Q8WVR3 580 aa15.57■□□□□ 0.08
USP1-203ENST00000442679 CCDC85AQ96PX6 553 aaPredicted RBP15.57■□□□□ 0.08
USP1-203ENST00000442679 PLA2G12BQ9BX93 195 aa15.57■□□□□ 0.08
USP1-203ENST00000442679 ABCC4O15439 1325 aa15.57■□□□□ 0.08
USP1-203ENST00000442679 BBOX1O75936 387 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms