RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
CDCA4P3-201ENST00000442572 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
CDCA4P3-201ENST00000442572 ZNF622Q969S3 477 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDCA4P3-201ENST00000442572 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 FAM177BA6PVY3 158 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 ALDH1B1P30837 517 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 CRY2Q49AN0 593 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 ADCY9O60503 1353 aa16.13■□□□□ 0.17
CDCA4P3-201ENST00000442572 ERFEQ4G0M1 354 aa16.12■□□□□ 0.17
CDCA4P3-201ENST00000442572 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
CDCA4P3-201ENST00000442572 ISCA1Q9BUE6 129 aa16.12■□□□□ 0.17
CDCA4P3-201ENST00000442572 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
CDCA4P3-201ENST00000442572 E9PSI1 815 aa16.11■□□□□ 0.17
CDCA4P3-201ENST00000442572 VAMP4O75379 141 aa16.11■□□□□ 0.17
CDCA4P3-201ENST00000442572 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
CDCA4P3-201ENST00000442572 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
CDCA4P3-201ENST00000442572 PHAXQ9H814 394 aaKnown RBP16.11■□□□□ 0.17
CDCA4P3-201ENST00000442572 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
CDCA4P3-201ENST00000442572 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
CDCA4P3-201ENST00000442572 ZNF784Q8NCA9 323 aaPredicted RBP16.1■□□□□ 0.17
CDCA4P3-201ENST00000442572 NLRP3Q96P20 1036 aa16.1■□□□□ 0.17
CDCA4P3-201ENST00000442572 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
CDCA4P3-201ENST00000442572 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
CDCA4P3-201ENST00000442572 MYH3P11055 1940 aa16.09■□□□□ 0.17
CDCA4P3-201ENST00000442572 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
CDCA4P3-201ENST00000442572 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
CDCA4P3-201ENST00000442572 LTBP3Q9NS15 1303 aa16.09■□□□□ 0.17
CDCA4P3-201ENST00000442572 ZC3H4Q9UPT8 1303 aaKnown RBP16.09■□□□□ 0.17
CDCA4P3-201ENST00000442572 TIAM2Q8IVF5 1701 aa16.08■□□□□ 0.17
CDCA4P3-201ENST00000442572 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
CDCA4P3-201ENST00000442572 KSR2Q6VAB6 950 aa16.08■□□□□ 0.16
CDCA4P3-201ENST00000442572 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
CDCA4P3-201ENST00000442572 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
CDCA4P3-201ENST00000442572 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
CDCA4P3-201ENST00000442572 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
CDCA4P3-201ENST00000442572 GRIPAP1Q4V328 841 aa16.07■□□□□ 0.16
CDCA4P3-201ENST00000442572 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
CDCA4P3-201ENST00000442572 MIER1Q8N108 512 aa16.07■□□□□ 0.16
CDCA4P3-201ENST00000442572 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
CDCA4P3-201ENST00000442572 RBM17Q96I25 401 aaKnown RBP16.07■□□□□ 0.16
CDCA4P3-201ENST00000442572 C21orf2O43822 256 aa16.06■□□□□ 0.16
CDCA4P3-201ENST00000442572 LMNB1P20700 586 aa16.06■□□□□ 0.16
CDCA4P3-201ENST00000442572 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
CDCA4P3-201ENST00000442572 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
CDCA4P3-201ENST00000442572 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
CDCA4P3-201ENST00000442572 PI4KAP2A4QPH2 592 aa16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 FLIIQ13045 1269 aa16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 PI4KAP1Q8N8J0 262 aa16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 MAP3K2Q9Y2U5 619 aa16.05■□□□□ 0.16
CDCA4P3-201ENST00000442572 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
CDCA4P3-201ENST00000442572 NFKBIEO00221 500 aa16.04■□□□□ 0.16
CDCA4P3-201ENST00000442572 RTKN2Q8IZC4 609 aa16.04■□□□□ 0.16
CDCA4P3-201ENST00000442572 MYD88Q99836 296 aa16.04■□□□□ 0.16
CDCA4P3-201ENST00000442572 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
CDCA4P3-201ENST00000442572 RNF181Q9P0P0 153 aa16.04■□□□□ 0.16
CDCA4P3-201ENST00000442572 PCCAP05165 728 aaPredicted RBP16.03■□□□□ 0.16
CDCA4P3-201ENST00000442572 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
CDCA4P3-201ENST00000442572 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
CDCA4P3-201ENST00000442572 TAF1P21675 1872 aa16.03■□□□□ 0.16
CDCA4P3-201ENST00000442572 LRRC37AA6NMS7 1700 aa16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 BBOX1O75936 387 aa16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 SF3B3Q15393 1217 aaKnown RBP16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 DDX46Q7L014 1031 aaKnown RBP16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 G2E3Q7L622 706 aa16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 TMC4Q7Z404 712 aa16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
CDCA4P3-201ENST00000442572 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 IRS4O14654 1257 aaPredicted RBP16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 RASSF7Q02833 373 aa16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 DNAAF4Q8WXU2 420 aa16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 TMX4Q9H1E5 349 aaPredicted RBP16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 SNED1Q8TER0 1413 aa16.01■□□□□ 0.15
CDCA4P3-201ENST00000442572 IGKV5-2P06315 115 aa16■□□□□ 0.15
CDCA4P3-201ENST00000442572 FKBP4Q02790 459 aaKnown RBP eCLIP16■□□□□ 0.15
CDCA4P3-201ENST00000442572 C3orf67Q6ZVT6 689 aa16■□□□□ 0.15
CDCA4P3-201ENST00000442572 SYNE4Q8N205 404 aa16■□□□□ 0.15
CDCA4P3-201ENST00000442572 PSMD1Q99460 953 aa16■□□□□ 0.15
CDCA4P3-201ENST00000442572 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
CDCA4P3-201ENST00000442572 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 PPEF1O14829 653 aaPredicted RBP15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 PDE8AO60658 829 aa15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 GRAPQ13588 217 aa15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 LINS1Q8NG48 757 aa15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 GRAPLQ8TC17 118 aaPredicted RBP15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 ATP6V0A2Q9Y487 856 aa15.99■□□□□ 0.15
CDCA4P3-201ENST00000442572 ABCC4O15439 1325 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms