RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
CSNK1E-210ENST00000442216 CACNA1SQ13698 1873 aa19.24■□□□□ 0.67
CSNK1E-210ENST00000442216 SLC10A5Q5PT55 438 aa19.24■□□□□ 0.67
CSNK1E-210ENST00000442216 G2E3Q7L622 706 aa19.24■□□□□ 0.67
CSNK1E-210ENST00000442216 CCDC24Q8N4L8 307 aa19.24■□□□□ 0.67
CSNK1E-210ENST00000442216 TNRC6CQ9HCJ0 1690 aaKnown RBP19.24■□□□□ 0.67
CSNK1E-210ENST00000442216 ADCY9O60503 1353 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 PI4KAP2A4QPH2 592 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 SRGNP10124 158 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 ERFEQ4G0M1 354 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 STYK1Q6J9G0 422 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 PI4KAP1Q8N8J0 262 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 MAP3K2Q9Y2U5 619 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 LAMB2P55268 1798 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
CSNK1E-210ENST00000442216 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
CSNK1E-210ENST00000442216 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
CSNK1E-210ENST00000442216 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
CSNK1E-210ENST00000442216 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
CSNK1E-210ENST00000442216 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-210ENST00000442216 NPR1P16066 1061 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 NEXNQ0ZGT2 675 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 FKBP5Q13451 457 aaPredicted RBP19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 ALDH1L2Q3SY69 923 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 CRY2Q49AN0 593 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 CNKSR1Q969H4 720 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 MYD88Q99836 296 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 TRMT112Q9UI30 125 aaKnown RBP19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 SH3TC1Q8TE82 1336 aa19.21■□□□□ 0.67
CSNK1E-210ENST00000442216 ATP5J2-PTCD1G3V325 749 aa19.2■□□□□ 0.66
CSNK1E-210ENST00000442216 SLX4Q8IY92 1834 aa19.19■□□□□ 0.66
CSNK1E-210ENST00000442216 ZNF622Q969S3 477 aaKnown RBP eCLIP19.19■□□□□ 0.667e-8■■■□□ 16.9
CSNK1E-210ENST00000442216 NLRP3Q96P20 1036 aa19.19■□□□□ 0.66
CSNK1E-210ENST00000442216 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
CSNK1E-210ENST00000442216 DNAAF4Q8WXU2 420 aa19.18■□□□□ 0.66
CSNK1E-210ENST00000442216 CWC25Q9NXE8 425 aaPredicted RBP19.18■□□□□ 0.66
CSNK1E-210ENST00000442216 HSP90B1P14625 803 aaKnown RBP19.17■□□□□ 0.66
CSNK1E-210ENST00000442216 ALDH1B1P30837 517 aa19.17■□□□□ 0.66
CSNK1E-210ENST00000442216 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
CSNK1E-210ENST00000442216 ZBTB38Q8NAP3 1195 aaPredicted RBP19.17■□□□□ 0.66
CSNK1E-210ENST00000442216 SBF1O95248 1867 aa19.17■□□□□ 0.66
CSNK1E-210ENST00000442216 MYH3P11055 1940 aa19.17■□□□□ 0.66
CSNK1E-210ENST00000442216 FER1L6Q2WGJ9 1857 aa19.16■□□□□ 0.66
CSNK1E-210ENST00000442216 PCCAP05165 728 aaPredicted RBP19.16■□□□□ 0.66
CSNK1E-210ENST00000442216 IGKV5-2P06315 115 aa19.16■□□□□ 0.66
CSNK1E-210ENST00000442216 HOXA10P31260 410 aaPredicted RBP19.16■□□□□ 0.66
CSNK1E-210ENST00000442216 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
CSNK1E-210ENST00000442216 PTPRCP08575 1304 aa19.16■□□□□ 0.66
CSNK1E-210ENST00000442216 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
CSNK1E-210ENST00000442216 LINS1Q8NG48 757 aa19.15■□□□□ 0.66
CSNK1E-210ENST00000442216 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
CSNK1E-210ENST00000442216 FAM89AQ96GI7 184 aa19.15■□□□□ 0.66
CSNK1E-210ENST00000442216 NEURL1BA8MQ27 555 aa19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 SOGA3Q5TF21 947 aa19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 RBM17Q96I25 401 aaKnown RBP19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 CRAMP1Q96RY5 1269 aa19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 CDHR2Q9BYE9 1310 aa19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 CCDC88AQ3V6T2 1871 aa19.14■□□□□ 0.65
CSNK1E-210ENST00000442216 HCLS1P14317 486 aaPredicted RBP19.13■□□□□ 0.65
CSNK1E-210ENST00000442216 IRS4O14654 1257 aaPredicted RBP19.12■□□□□ 0.65
CSNK1E-210ENST00000442216 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
CSNK1E-210ENST00000442216 CWF19L2Q2TBE0 894 aaKnown RBP19.12■□□□□ 0.65
CSNK1E-210ENST00000442216 ARHGAP27Q6ZUM4 889 aa19.12■□□□□ 0.65
CSNK1E-210ENST00000442216 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
CSNK1E-210ENST00000442216 F6X3S4 739 aa19.11■□□□□ 0.65
CSNK1E-210ENST00000442216 RARSP54136 660 aaKnown RBP19.11■□□□□ 0.65
CSNK1E-210ENST00000442216 GCKRQ14397 625 aa19.11■□□□□ 0.65
CSNK1E-210ENST00000442216 BEND3Q5T5X7 828 aa19.11■□□□□ 0.65
CSNK1E-210ENST00000442216 C3orf67Q6ZVT6 689 aa19.11■□□□□ 0.65
CSNK1E-210ENST00000442216 DICER1Q9UPY3 1922 aaKnown RBP19.11■□□□□ 0.65
CSNK1E-210ENST00000442216 H7C1W4 665 aa19.1■□□□□ 0.65
CSNK1E-210ENST00000442216 YY1P25490 414 aa19.1■□□□□ 0.65
CSNK1E-210ENST00000442216 C7orf43Q8WVR3 580 aa19.1■□□□□ 0.65
CSNK1E-210ENST00000442216 TAF1P21675 1872 aa19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 C21orf2O43822 256 aa19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 PDE8AO60658 829 aa19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 ALDH1L1O75891 902 aa19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 RTL5Q5HYW3 569 aaPredicted RBP19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 CC2D2BQ6DHV5 1058 aa19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 BCL2L13Q9BXK5 485 aa19.09■□□□□ 0.65
CSNK1E-210ENST00000442216 LTBP3Q9NS15 1303 aa19.08■□□□□ 0.65
CSNK1E-210ENST00000442216 GRIPAP1Q4V328 841 aa19.08■□□□□ 0.64
CSNK1E-210ENST00000442216 DDX46Q7L014 1031 aaKnown RBP19.08■□□□□ 0.64
CSNK1E-210ENST00000442216 ABCC4O15439 1325 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 BBOX1O75936 387 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 ARHGAP45Q92619 1136 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 SRCIN1Q9C0H9 1055 aa19.07■□□□□ 0.64
CSNK1E-210ENST00000442216 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
CSNK1E-210ENST00000442216 CASP7P55210 303 aa19.06■□□□□ 0.64
CSNK1E-210ENST00000442216 GRAPQ13588 217 aa19.06■□□□□ 0.64
CSNK1E-210ENST00000442216 SLC4A10Q6U841 1118 aa19.06■□□□□ 0.64
CSNK1E-210ENST00000442216 TMC4Q7Z404 712 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms