RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 EDEM1Q92611 657 aa8.72□□□□□ -1.01
PFDN4-202ENST00000441080 NDFIP2Q9NV92 336 aa8.72□□□□□ -1.01
PFDN4-202ENST00000441080 BRPF3Q9ULD4 1205 aa8.72□□□□□ -1.01
PFDN4-202ENST00000441080 ATXN7L1Q9ULK2 861 aaPredicted RBP8.72□□□□□ -1.01
PFDN4-202ENST00000441080 TERTO14746 1132 aaKnown RBP8.71□□□□□ -1.02
PFDN4-202ENST00000441080 EFSO43281 561 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 NDUFB5O43674 189 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 PCSK2P16519 638 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 MZF1P28698 734 aaPredicted RBP8.71□□□□□ -1.02
PFDN4-202ENST00000441080 CCDC27Q2M243 656 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 SLC16A10Q8TF71 515 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
PFDN4-202ENST00000441080 RTCBQ9Y3I0 505 aaKnown RBP8.71□□□□□ -1.02
PFDN4-202ENST00000441080 MAPK1P28482 360 aa8.7□□□□□ -1.02
PFDN4-202ENST00000441080 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
PFDN4-202ENST00000441080 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
PFDN4-202ENST00000441080 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
PFDN4-202ENST00000441080 CMTR1Q8N1G2 835 aaKnown RBP8.7□□□□□ -1.02
PFDN4-202ENST00000441080 PODXL2Q9NZ53 605 aa8.7□□□□□ -1.02
PFDN4-202ENST00000441080 DCTN4Q9UJW0 460 aa8.7□□□□□ -1.02
PFDN4-202ENST00000441080 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
PFDN4-202ENST00000441080 PDGFAP04085 211 aa8.69□□□□□ -1.02
PFDN4-202ENST00000441080 CD33P20138 364 aa8.69□□□□□ -1.02
PFDN4-202ENST00000441080 FGFR3P22607 806 aa8.69□□□□□ -1.02
PFDN4-202ENST00000441080 KCNQ4P56696 695 aa8.69□□□□□ -1.02
PFDN4-202ENST00000441080 NUDT16Q96DE0 195 aaKnown RBP8.69□□□□□ -1.02
PFDN4-202ENST00000441080 STRN4Q9NRL3 753 aa8.69□□□□□ -1.02
PFDN4-202ENST00000441080 MARK1Q9P0L2 795 aa8.69□□□□□ -1.02
PFDN4-202ENST00000441080 VSIG8P0DPA2 414 aa8.68□□□□□ -1.02
PFDN4-202ENST00000441080 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
PFDN4-202ENST00000441080 USP5P45974 858 aa8.68□□□□□ -1.02
PFDN4-202ENST00000441080 TTC16Q8NEE8 873 aa8.68□□□□□ -1.02
PFDN4-202ENST00000441080 RPLP1P05386 114 aaKnown RBP8.67□□□□□ -1.02
PFDN4-202ENST00000441080 GPR161Q8N6U8 529 aaKnown RBP8.67□□□□□ -1.02
PFDN4-202ENST00000441080 HCN2Q9UL51 889 aa8.67□□□□□ -1.02
PFDN4-202ENST00000441080 FNDC3AQ9Y2H6 1198 aaKnown RBP8.67□□□□□ -1.02
PFDN4-202ENST00000441080 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 XYLBO75191 536 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 MFAP1P55081 439 aaKnown RBP8.66□□□□□ -1.02
PFDN4-202ENST00000441080 TRIP4Q15650 581 aaPredicted RBP8.66□□□□□ -1.02
PFDN4-202ENST00000441080 C8orf34Q49A92 452 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 IRF7Q92985 503 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 KCNMB2Q9Y691 235 aa8.66□□□□□ -1.02
PFDN4-202ENST00000441080 SPEM2Q0P670 501 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 NFX1Q12986 1120 aaKnown RBP8.65□□□□□ -1.02
PFDN4-202ENST00000441080 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 GAS6Q14393 721 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 GRIN2CQ14957 1233 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 GJD3Q8N144 294 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 C11orf16Q9NQ32 467 aa8.65□□□□□ -1.02
PFDN4-202ENST00000441080 BMP4P12644 408 aa8.64□□□□□ -1.03
PFDN4-202ENST00000441080 MX2P20592 715 aa8.64□□□□□ -1.03
PFDN4-202ENST00000441080 CTBSQ01459 385 aa8.64□□□□□ -1.03
PFDN4-202ENST00000441080 CCINQ13939 588 aa8.64□□□□□ -1.03
PFDN4-202ENST00000441080 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
PFDN4-202ENST00000441080 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
PFDN4-202ENST00000441080 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
PFDN4-202ENST00000441080 EGFRP00533 1210 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 EHHADHQ08426 723 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 PNMA5Q96PV4 448 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 SLC30A3Q99726 388 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
PFDN4-202ENST00000441080 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
PFDN4-202ENST00000441080 A6NHS1 94 aa8.62□□□□□ -1.03
PFDN4-202ENST00000441080 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
PFDN4-202ENST00000441080 TMC7Q7Z402 723 aa8.62□□□□□ -1.03
PFDN4-202ENST00000441080 ZNF438Q7Z4V0 828 aa8.62□□□□□ -1.03
PFDN4-202ENST00000441080 FAM129BQ96TA1 746 aa8.62□□□□□ -1.03
PFDN4-202ENST00000441080 PRR12Q9ULL5 1215 aa8.62□□□□□ -1.03
PFDN4-202ENST00000441080 NSFL1CQ9UNZ2 370 aaKnown RBP8.62□□□□□ -1.03
PFDN4-202ENST00000441080 SASH3O75995 380 aa8.61□□□□□ -1.03
PFDN4-202ENST00000441080 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
PFDN4-202ENST00000441080 RNFT1Q5M7Z0 435 aa8.61□□□□□ -1.03
PFDN4-202ENST00000441080 PDE12Q6L8Q7 609 aaKnown RBP8.61□□□□□ -1.03
PFDN4-202ENST00000441080 RAB44Q7Z6P3 723 aaPredicted RBP8.61□□□□□ -1.03
PFDN4-202ENST00000441080 BHMTQ93088 406 aa8.61□□□□□ -1.03
PFDN4-202ENST00000441080 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
PFDN4-202ENST00000441080 DMRTB1Q96MA1 342 aa8.61□□□□□ -1.03
PFDN4-202ENST00000441080 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.61□□□□□ -1.03
PFDN4-202ENST00000441080 C2CD2LO14523 706 aa8.6□□□□□ -1.03
PFDN4-202ENST00000441080 WFS1O76024 890 aa8.6□□□□□ -1.03
PFDN4-202ENST00000441080 NFKB1P19838 968 aa8.6□□□□□ -1.03
PFDN4-202ENST00000441080 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
PFDN4-202ENST00000441080 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
PFDN4-202ENST00000441080 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
PFDN4-202ENST00000441080 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
PFDN4-202ENST00000441080 GPR182O15218 404 aa8.59□□□□□ -1.03
PFDN4-202ENST00000441080 RARAP10276 462 aa8.59□□□□□ -1.03
PFDN4-202ENST00000441080 TARSP26639 723 aaKnown RBP8.59□□□□□ -1.03
PFDN4-202ENST00000441080 MAP2K3P46734 347 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms